mRNA_M-pyrifera_M_contig118.3734.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI) HSP 1 Score: 629 bits (1622), Expect = 8.270e-210 Identity = 363/624 (58.17%), Postives = 456/624 (73.08%), Query Frame = 1
Query: 1 DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDYYTYTAVKYAKDAGHDAIVELLGGEDDAAGWVGTEDVYAGMGMGDGEESTAPSGGLWIRHMDPETQLAYHMNDETGESWWETDLLAVAKDFVAAVPAAG-------TGGEAAA-SLPPMGVREWLVQEQVRSWLVTIFSRVDPLRLMEVDLVMQVGKADFKGMLKALLASYGVKELAFLRNVSSPKLEPLGVPSLLPVEDEIQTKGEDKTAPSSP------VCVRGGVARFTNAWGRLQSSRKTADTVLSTPPVVVTVETNASVVSPETNAGTSTAANGQQDRQDSTP----------------NLSRVMSSPRGLKHVDSLAVLRAEAEKTYQEATVRHEKELADERQRQKAVLDEQRSAILNLQDRMQKRKASLVQAKKESDEASGKVEKLQAALADDSAGQEASDRLSEEISQLKARVASERMRFSHITEALEAAKGSLEERAAKQEAQEEDRRVRLEHLRLENAAEVKTLCTEAADALSKVEKAWEAERTELERGLTEQMSQVRTILEETVQGAAKVLSEAAATTKSSVDAAKQ 1782
DLVE +LAKGA+PTAVN VGIC LHYTC+ADSLS +AAEALLWRGA+ S AETTYGCTPLHYAAS+GDA++CALLVEHGAQP+TQDYY YTAVKYAKDAGH+ +VEL GGE++ GW E+ Y GM GD E++ P+GGLWIRH+DP+T+LAY+MNDETGESWWETDL AVAK+F+A VPA TG +A+ +LPP+GVREWLVQEQVRSWLV IFSR DPL+LMEVDL MQ+GKADFK ML+AL+ YG+K++ FL SSPKLEPLGV SL+P EDE+ G +++ P + G + + +SS +TA+ V P +T+ ++S + AA GQQ +D +L R SS LK VDS AVLRAEA+K +QEA R E ELA+ERQRQ + L+EQR + NL++ +KR+A++ + K+E++EA V KL++ALADDS+GQ ASD LSEEI++LKA VA+E +R SHITE LEA KGS+EERAAKQ+AQEEDRRVRLE LR +N AEV+ + T+AAD+L K E+AW+ ER ELE LTE++ + +L+ETV+ AA+VLSE AATTK++ DAAKQ
Sbjct: 116 DLVEPILAKGANPTAVNAVGICALHYTCFADSLSYDAAEALLWRGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKTQDYYNYTAVKYAKDAGHEHVVELFGGEEEGEGWEEVEEAYTGMDTGDEGEASGPTGGLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGSVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEVDLAMQIGKADFKEMLQALMIRYGIKKMDFLGEASSPKLEPLGVSSLIPSEDELCKTGAERSTPKTDGEXXXXXTEDGAHVQPSQEAEEHRSSGETAELV----PAALTIRRHSST------SIDGIAAVGQQGGRDKNXXXXXXXXXXXXXXXXRSLHRGASSQHNLKRVDSPAVLRAEADKVFQEAVSRQENELAEERQRQASALNEQRKTLRNLEEDFRKREATMSKTKEEAEEALSGVAKLRSALADDSSGQAASDSLSEEITKLKAGVAAENVRLSHITETLEATKGSVEERAAKQQAQEEDRRVRLERLRSDNVAEVEKIRTDAADSLGKAEQAWDTERVELEGDLTEKVDRETALLKETVESAAQVLSETAATTKNATDAAKQ 729
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE) HSP 1 Score: 607 bits (1565), Expect = 3.550e-201 Identity = 374/693 (53.97%), Postives = 460/693 (66.38%), Query Frame = 1
Query: 1 DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQ----TQDYYTYTAVKYAKDAGHDAIVELLGGEDDAAGWVGTEDVYAGMGMGDGEESTAPSGGLWIRHMDPETQLAYHMNDETGESWWETDLLAVAKDFVAAVPAAGTG------GEAAAS--LPPMGVREWLVQEQVRSWLVTIFSRVDPLRLMEVDLVMQVGK------------------------ADFKGMLKALLASYGVKELAFLRNVSSPKLEPLGVPSLLPVEDEIQTKGEDKTAPSS------PVCVRGGVARFTNAWGRLQSSRKTADTVLSTPPVVVTVETNASVVSPETNAGTSTAANGQQDRQDSTP-------------NLSRVMSSPRGLKHVDSLAVLRAEAEKTYQEATVRHEKELADERQRQKAVLDEQRSAILNLQDRMQKRKASLVQAKKESDEASGKVEKLQAALADDSAGQEASDRLSEEISQLKARVASERMRFSHITEALEAAKGSLEERAAKQEAQEEDRRVRLEHLRLENAAEVKTLCTEAADALSKVEKAWEAERTELERGLTEQMSQVRTILEETVQGAAKVLSEAAATTKSSVDAAKQASQSDEARLWMKSKEAEHASSKQIDQTNKQLHTSLRREMERAKQ 1914
DLVE +LAKGA+PTAVN VGIC LHYTC+ADSLS +AAEALLW+GA+ S AETTYGCTPLHYAAS+GDA++CALLVEHGAQP+ TQDYY YTAVKYAKDAGH+ +VELLGGE++ GW E+ Y GMG G+ E++ P+GGLWIRH+DP+T+LAY+MNDETGESWWETDL AVAK+F+A VPA G G +AS LPP+GVREWLVQEQVRSWLV IFSR DPL+LMEVDL MQ+GK ADFK ML+AL+ YG+K++ FLR S PKLEPLGV SL+P EDE+ G +++ P + P G A+ + A +SSR+ + V P +T ++S T+ G A Q R +L R SS L+ VDS AVLRAEA+K +Q+ ELA+ERQRQ + L+EQR + +L++ ++KR+A+L + K+E++EA V KLQ+ALADDS+GQ A D LSEEI++LKA VA+E++R SHITE LEA KGS+EE +AQEEDRRVRLE LR +N AEV+ + T+AAD+L K E+AW+ ER ELER LTE +GA KV DEAR WMK EHA SKQIDQTNKQLHTSLRREMERAKQ
Sbjct: 101 DLVEPILAKGANPTAVNAVGICALHYTCFADSLSYDAAEALLWKGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKASNATQDYYNYTAVKYAKDAGHEHVVELLGGEEEGEGWEEVEEAYTGMGTGEEGEASGPTGGLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGGVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEVDLAMQIGKVWLWAFPSVFAMLMTLHEMRWTPKADFKEMLQALMIRYGIKKMDFLREASFPKLEPLGVSSLIPSEDELSKSGAEQSTPKTDGEQKPPATEDGAHAQPSRAAEGHRSSREATELV----PAALTTRKHSS-----TSIGRIAAVGQQGGRXXXXXXXXXXXXXXXXNRSLYRGASSQHNLQRVDSPAVLRAEADKVFQD------NELAEERQRQTSALNEQRKTLRSLEEDLRKREAALAKTKEEAEEAMSGVAKLQSALADDSSGQAAIDSLSEEITKLKAGVAAEKVRLSHITETLEATKGSVEE-----QAQEEDRRVRLERLRSDNVAEVEKIRTDAADSLGKAEQAWDTERVELERDLTE-------------KGAGKV---------------------DEARAWMKQHAEEHAGSKQIDQTNKQLHTSLRREMERAKQ 739
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.220e-33 Identity = 107/311 (34.41%), Postives = 146/311 (46.95%), Query Frame = 1
Query: 4 LVESVLAKGASPT---AVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDYYTYTAVKYAKDAGHDAIVELL---------------------------GGEDDAAGWV-----GTED-------------VYAG-MGMGDGEESTAPSG----------GLWIRHMDPETQLAYHMNDETGESWWETDLLAVAKDFVAAVPAAGTGGEAAASLPPMGVREWLVQEQVRSWLVTIFSRVDPLRLMEVDLVMQVGKADFKGMLKALLASYGVKE 759
LV +LA+G AVN G C LH+ CY DS+ + A LL RGA+P E TYGCTPLHYAA AGD +LC L+E GA+ T D Y YTAV YAK +G V+ L G E + G+V TED + G +GM + S G G W R DP++ +AY++N++TGES WE DLLA A+ EA P +++WL Q+ ++ L+ R DPL+LM+VD +++ D + + L Y +E
Sbjct: 172 LVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGATDCVDYLEEVSAPGASSTATIKFSTGRGGIVTSSGVEASSTGFVREDSFDTEDGDDFRPQGNATSAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQAL---------RKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQVDDMLKRRLGDEETLFNELANQYSAQE 473
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.740e-30 Identity = 99/280 (35.36%), Postives = 137/280 (48.93%), Query Frame = 1
Query: 1 DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDYYTYTAVKYAKDAGHDAIVELLGGEDDAAGWVGTEDVYAGMGMGDGE---ESTAPSGGL-------WIRHMDPETQLAYHMNDETGESWWETDLLAVAKDFVAAVPAA------------GTGGEAAASLP---PMGVREWLVQEQVRSWLVTIFSRVDPLRLMEVDLVMQVGKADFKG----MLKALLASYGV 753
DLV +L KGA AVN G C LH+ CY +S S+ A+ LL GADP AE+T+GCTPLHY A GD + C LL+ +GAQ DYY YT V YA +AG + L + AA A MG S+ P G W H+DP++ Y+++ +TGE WE++L + + V A+ G AA+ P P L+++ ++ LV F+ DP RL+EVD + A++ G +LK L Y V
Sbjct: 31 DLVRIMLNKGADANAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGAQIGALDYYNYTCVDYASEAGMTEVAAFLQKKLSAA-------TKATMGQSSKNLMSPSSKPYGNSNTIDIANWESHIDPDSGGKYYIHMKTGECLWESELKQRIQQYQVQVGASRDENDRAGKNDDGIRVRAASETPDKAPKISEADLIRQATQARLVVFFTTHDPSRLVEVDKL----TAEYSGREAQLLKELCEKYKV 299
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: A0A482SRH0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRH0_9ARCH) HSP 1 Score: 129 bits (325), Expect = 1.030e-27 Identity = 85/276 (30.80%), Postives = 133/276 (48.19%), Query Frame = 1
Query: 1 DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDYYTYTAVKYAKDAGHDAIVELLGGEDDAAGWVGTEDVYAGMGMGDGE-----ESTAPSGGLWIRHMDPETQLAYHMNDETGESWWETDLLAVAKDFVAAVPAAGTGGEA---------------AASLP---PMGVREWLVQEQVRSWLVTIFSRVDPLRLMEVDLVMQVGKADFKGMLKALLASYGVKE 759
DL ++ KGA+P AVN G LH+ CY DS SL A+ LL GA+P AE+ YGCTPLHY A +GD + C L++++GAQ DYY YT V YA++AG L + D + G + + E++ W H+DP++ Y+++ ++GE WE +L K+ + A E ++ LP P L+ + + L+ S+ DP RL+++ +++ K + +L L Y V+E
Sbjct: 158 DLARIMINKGANPNAVNTAGASCLHFACYQDSSSLPIAKVLLQNGANPDVAESNYGCTPLHYCAGSGDLEFCKLILQYGAQINAYDYYNYTCVDYAREAGFHDCANFLQKKLDKTAVKFNQSTKTGGALKATQSFRNNETSYEDMSYWESHVDPDSGGKYYIHTKSGECLWEAEL----KERINAYSKQQNFREGXXXXXXXXNLLSMKFSSPLPADKPKISEAALISQATEARLIAFLSKHDPARLVDISSLIEKYKGKEQELLNDLCKQYKVQE 429
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: A0A7S0XEW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEW9_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.480e-25 Identity = 68/177 (38.42%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 1 DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDYYTYTAVKYAKDAG-------HDAIVELLGGEDDAAGWVGTEDVYAGMGMGDGEESTAPSGGLWIRHMDPETQLAYHMNDETGESWWETDL 510
DLV ++ KGA P AVN +G+ LH+ CY +S S+ A+ LL GA+P E+TYGCTPLHY A GD C LL+ +GAQ T D+Y YT + YA++AG I+E + ++ V D + + + D W +D T Y+ N+ TGE WE DL
Sbjct: 10 DLVRIMINKGADPNAVNNLGVSSLHFACYRESSSINIAKLLLQFGANPEVKESTYGCTPLHYCAGTGDLPFCKLLITYGAQTNTYDFYNYTCIDYAREAGVIPLVLYFQQIIEKNNRNNISSNVV---DNSSFLNLPD-----------WQGAIDSVTGGRYYTNNITGECLWEQDL 172
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Match: A0A7S1GSC4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GSC4_HEMAN) HSP 1 Score: 54.3 bits (129), Expect = 2.510e-5 Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 52 GVGICPLHYTCYADSLS---LEAAEALLWRGADPSAAETTYGCTPLHYAASAGDADLCALLVEHGAQPQTQDY 261
G+ LH+ C AD S L E L+ GAD +A + G TPLHYA G+AD+C LLV HGA P +++
Sbjct: 46 GLNRTALHFACLADEESIGNLAVVEGLIRLGADVNARDDA-GDTPLHYACCGGNADVCQLLVVHGADPTIRNF 117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118.3734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118.3734.1 >prot_M-pyrifera_M_contig118.3734.1 ID=prot_M-pyrifera_M_contig118.3734.1|Name=mRNA_M-pyrifera_M_contig118.3734.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=639bp DLVESVLAKGASPTAVNGVGICPLHYTCYADSLSLEAAEALLWRGADPSAback to top mRNA from alignment at M-pyrifera_M_contig118:127..7444+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118.3734.1 ID=mRNA_M-pyrifera_M_contig118.3734.1|Name=mRNA_M-pyrifera_M_contig118.3734.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7318bp|location=Sequence derived from alignment at M-pyrifera_M_contig118:127..7444+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118:127..7444+ >mRNA_M-pyrifera_M_contig118.3734.1 ID=mRNA_M-pyrifera_M_contig118.3734.1|Name=mRNA_M-pyrifera_M_contig118.3734.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3834bp|location=Sequence derived from alignment at M-pyrifera_M_contig118:127..7444+ (Macrocystis pyrifera P11B4 male)back to top |