prot_M-pyrifera_M_contig117969.3725.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117969.3725.1
Unique Nameprot_M-pyrifera_M_contig117969.3725.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length91
Homology
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: A0A8J9W3M0_BRALA (TAF11 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9W3M0_BRALA)

HSP 1 Score: 65.9 bits (159), Expect = 3.470e-11
Identity = 33/85 (38.82%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    6 SIKVSELLPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            S++  E   T +E +  + + M+ L+  F+ EQ+ R+E FR S+  KA +K++M +  G +V+ N++I M+G++KV+VGE+VEEA
Sbjct:   73 SVEEGETRKTKMEQLEEERQKMQVLVASFSEEQLNRYEMFRRSAFPKASIKRIMQQMTGTSVSQNVVIAMAGISKVFVGEVVEEA 157          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: UPI0016035AC5 (transcription initiation factor TFIID subunit 11-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016035AC5)

HSP 1 Score: 65.9 bits (159), Expect = 3.470e-11
Identity = 33/85 (38.82%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    6 SIKVSELLPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            S++  E   T +E +  + + M+ L+  F+ EQ+ R+E FR S+  KA +K++M +  G +V+ N++I M+G++KV+VGE+VEEA
Sbjct:   73 SVEEGETRKTKMEQLEEERQKMQVLVASFSEEQLNRYEMFRRSAFPKASIKRIMQQMTGTSVSQNVVIAMAGISKVFVGEVVEEA 157          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: J9JZX6_ACYPI (TAFII28 domain-containing protein n=6 Tax=Aphididae TaxID=27482 RepID=J9JZX6_ACYPI)

HSP 1 Score: 65.1 bits (157), Expect = 4.180e-11
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   21 AAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            A + E MR L+  FT EQ++R+E FR S   KA +K+++    G +V+ N++I MSG+ KV++GE+VEEA
Sbjct:   58 AEEREKMRVLVSNFTEEQLDRYEMFRRSVFPKAAIKRIVQTITGNSVSQNVVIAMSGIAKVFIGEIVEEA 127          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: A0A6G0U7P9_APHGL (TAFII28 domain-containing protein n=6 Tax=Aphididae TaxID=27482 RepID=A0A6G0U7P9_APHGL)

HSP 1 Score: 65.1 bits (157), Expect = 4.180e-11
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   21 AAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            A + E MR L+  FT EQ++R+E FR S   KA +K+++    G +V+ N++I MSG+ KV++GE+VEEA
Sbjct:   58 AEEREKMRVLVSNFTEEQLDRYEMFRRSVFPKAAIKRIVQTITGNSVSQNVVIAMSGIAKVFIGEIVEEA 127          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: A0A1A9Y512_GLOFF (TAFII28 domain-containing protein n=5 Tax=Glossina TaxID=7393 RepID=A0A1A9Y512_GLOFF)

HSP 1 Score: 65.5 bits (158), Expect = 4.640e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   13 LPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            L T  E    + E M+ L+  FT EQ++R+E +R S+  KA VK+LM    G +V+ N++I MSG+ KV+VGE+VEEA
Sbjct:   75 LKTKKEMEEEEREKMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEVVEEA 152          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: A0A1A9WK97_9MUSC (TAFII28 domain-containing protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9WK97_9MUSC)

HSP 1 Score: 65.5 bits (158), Expect = 4.640e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   13 LPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            L T  E    + E M+ L+  FT EQ++R+E +R S+  KA VK+LM    G +V+ N++I MSG+ KV+VGE+VEEA
Sbjct:   75 LKTKKEMEEEEREKMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEVVEEA 152          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: U5EQV7_9DIPT (Putative transcription initiation factor tfiid subunit 11 n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5EQV7_9DIPT)

HSP 1 Score: 65.5 bits (158), Expect = 5.970e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   25 EPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            E M+ L+  FT EQ++R+E FR S+  KA VK+LM    G +V+ N++I MSG+ KV+VGE+VEEA
Sbjct:  104 EKMQVLVSNFTEEQLDRYEMFRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEIVEEA 169          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: UPI0008118C26 (transcription initiation factor TFIID subunit 11 n=2 Tax=Rhagoletis TaxID=28609 RepID=UPI0008118C26)

HSP 1 Score: 65.5 bits (158), Expect = 5.970e-11
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    1 ADVSESIKVSELLPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            AD+S+ +  S+   T  E    + E M+ L+  FT EQ++R+E +R S+  KA VK+LM    G +V+ N++I MSG+ KV+VGE+VEEA
Sbjct:   81 ADLSDDLP-SKKQKTKKEMEEEEREKMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEIVEEA 169          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: W8B3A4_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8B3A4_CERCA)

HSP 1 Score: 64.7 bits (156), Expect = 1.170e-10
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   15 TSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            T  E    + E M+ L+  FT EQ++R+E +R S+  KA VK+LM    G +V+ N++I MSG+ KV+VGE+VEEA
Sbjct:   94 TKKEMEEEEREKMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVGEIVEEA 169          
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Match: A0A6P4ZVT3_BRABE (transcription initiation factor TFIID subunit 11-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZVT3_BRABE)

HSP 1 Score: 64.3 bits (155), Expect = 1.460e-10
Identity = 32/85 (37.65%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    6 SIKVSELLPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSLAKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEA 90
            S++  E   + +E +  + + M+ L+  F+ EQ+ R+E FR S+  KA +K++M +  G +V+ N++I M+G++KV+VGE+VEEA
Sbjct:   79 SVEEGETRKSKMEQLEEERQKMQVLVASFSEEQLNRYEMFRRSAFPKASIKRIMQQMTGTSVSQNVVIAMAGISKVFVGEVVEEA 163          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117969.3725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J9W3M0_BRALA3.470e-1138.82TAF11 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
UPI0016035AC53.470e-1138.82transcription initiation factor TFIID subunit 11-l... [more]
J9JZX6_ACYPI4.180e-1145.71TAFII28 domain-containing protein n=6 Tax=Aphidida... [more]
A0A6G0U7P9_APHGL4.180e-1145.71TAFII28 domain-containing protein n=6 Tax=Aphidida... [more]
A0A1A9Y512_GLOFF4.640e-1146.15TAFII28 domain-containing protein n=5 Tax=Glossina... [more]
A0A1A9WK97_9MUSC4.640e-1146.15TAFII28 domain-containing protein n=1 Tax=Glossina... [more]
U5EQV7_9DIPT5.970e-1151.52Putative transcription initiation factor tfiid sub... [more]
UPI0008118C265.970e-1143.33transcription initiation factor TFIID subunit 11 n... [more]
W8B3A4_CERCA1.170e-1046.05(Mediterranean fruit fly) hypothetical protein n=1... [more]
A0A6P4ZVT3_BRABE1.460e-1037.65transcription initiation factor TFIID subunit 11-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006809TAFII28-like proteinPFAMPF04719TAFII28coord: 30..90
e-value: 2.4E-22
score: 78.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 34..91
e-value: 8.0E-20
score: 72.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 34..91
NoneNo IPR availablePANTHERPTHR13218FAMILY NOT NAMEDcoord: 14..90
NoneNo IPR availablePANTHERPTHR13218:SF8TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11coord: 14..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117969contigM-pyrifera_M_contig117969:2..274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117969.3725.1mRNA_M-pyrifera_M_contig117969.3725.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117969 2..274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117969.3725.1 ID=prot_M-pyrifera_M_contig117969.3725.1|Name=mRNA_M-pyrifera_M_contig117969.3725.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp
ADVSESIKVSELLPTSIESVAAQTEPMRALLDQFTTEQMERFEKFRSSSL
AKAQVKKLMARAIGGAVTDNMLIVMSGVTKVWVGELVEEAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006809TAFII28
IPR009072Histone-fold