mRNA_M-pyrifera_M_contig117966.3724.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117966.3724.1
Unique NamemRNA_M-pyrifera_M_contig117966.3724.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A507CBE5_9FUNG (N-acetyltransferase domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CBE5_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 1.720e-40
Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            V+E L  P+ ++VA+YR +VVGCA   P GYI +VAV+ GW    IA+FML+ L+Q+   RD+TLHVSA NPAM+LYQQFGFKPE ++VNFY +YLPPDS HC +A  +R R
Sbjct:  190 VAENLMYPDYSIVAIYRRLVVGCAFMTPEGYIPYVAVRPGWGSHGIARFMLYYLIQSLPSRDITLHVSADNPAMMLYQQFGFKPEEFVVNFYDKYLPPDSRHCKNAFFVRLR 301          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A1Y2BW85_9FUNG (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BW85_9FUNG)

HSP 1 Score: 131 bits (330), Expect = 4.480e-37
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQ---TFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            V+E L  P+ +V+ALY+ +VVGCA  LP GYI+++ V  GW+R+ IA+FM+  LLQ   ++G +DVTLHVSA NPAM+LYQ FGFK E ++VNFY +YLP  S  C +AL LRRR
Sbjct:   30 VTEHLSRPDLSVIALYQRVVVGCAFILPDGYISYIMVLPGWQRAGIARFMMHHLLQCVQSYG-KDVTLHVSANNPAMMLYQSFGFKAEEFVVNFYDKYLPEGSRECRNALFLRRR 143          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A397V239_9GLOM (N-acetyltransferase domain-containing protein n=2 Tax=Glomeromycetes TaxID=214506 RepID=A0A397V239_9GLOM)

HSP 1 Score: 130 bits (327), Expect = 2.370e-36
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            VSE L  P+ +VVA+YR +V+GC    P  YI ++AV  GW +S I +FML+ L+QT   +DVTLHVSA NPAM+LYQ+FGFKPE +IVNFY +YLP  S  C +A  +R R
Sbjct:   53 VSENLLFPDFSVVAMYRRLVIGCGFMTPEAYITYIAVAPGWEKSGIGQFMLYHLVQTNIGKDVTLHVSANNPAMILYQKFGFKPEEFIVNFYDKYLPDGSLGCKNAFFVRLR 164          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A7SYB3_NEMVE (Predicted protein n=4 Tax=Nematostella vectensis TaxID=45351 RepID=A7SYB3_NEMVE)

HSP 1 Score: 131 bits (330), Expect = 4.000e-36
Identity = 64/116 (55.17%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    4 SECLQCPEATVVALYRHMVVGCAMALPS-----GYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            SECLQ P+ + V LYR  V+G A  +P       YI+F+ V   W+ + I  +ML+ L+QT   +DVTLHVSATN AMLLYQ+FGFKPE +I+NFY RYLP +SP CPHA  LR R
Sbjct:  105 SECLQYPDFSCVVLYRCYVIGFAFMVPDVKYNEAYISFILVHPEWQHAGIGSYMLYHLIQTCMGKDVTLHVSATNSAMLLYQRFGFKPEEFIINFYERYLPANSPQCPHAFFLRLR 220          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A1Y1YTM9_9FUNG (N-acetyltransferase domain-containing protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YTM9_9FUNG)

HSP 1 Score: 131 bits (330), Expect = 4.220e-36
Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 1
Query:    4 SECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            SE L  P+ ++VALY+ MV+GCA   P  YI ++AV RGW  + I KFML+ L+QT   +DVTLHV A NPAM+LYQ+FGFKPE + VNFY +YLP  S  C +A  +R R
Sbjct:  112 SEALLFPDFSIVALYKRMVIGCAFMTPDAYITYIAVDRGWEGAGIGKFMLYHLIQTSIGKDVTLHVFANNPAMILYQKFGFKPEQFFVNFYDKYLPEGSRLCKNAFFMRLR 222          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A137P321_CONC2 (N-acetyltransferase domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P321_CONC2)

HSP 1 Score: 139 bits (349), Expect = 7.370e-36
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGP-RDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            +S+ L  PE TV+ALY+ +V+GCA   P GYI ++AV  GW+   I KFML+ L+QT G  +D+TLHVSA NPAM++YQ+FGFKPE +++NFY +YLP DS  C ++LL+R R
Sbjct:  644 ISDALDFPEFTVIALYKKLVIGCAFMTPEGYITYIAVSEGWKGIGIGKFMLYHLIQTAGKGQDITLHVSANNPAMIMYQKFGFKPEQFLINFYDKYLPQDSKLCKNSLLIRLR 756          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A0L0S578_ALLM3 (N-acetyltransferase domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S578_ALLM3)

HSP 1 Score: 137 bits (346), Expect = 2.120e-35
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            VSE LQ PE  VVA+Y+ +VVGCA+A P GY+A++AV  GW  + IA FML+ + +   PRDVTLHVSA+NPAM+LYQ+FGFKPE +IV+FY +Y PP+S    HA   R R
Sbjct:  794 VSESLQYPEFGVVAVYKKLVVGCALATPDGYLAYLAVLPGWTNAGIASFMLYWVCRQIAPRDVTLHVSASNPAMILYQKFGFKPEEFIVDFYDKYQPPESTDSKHAFFCRLR 905          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A507C954_9FUNG (N-acetyltransferase domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C954_9FUNG)

HSP 1 Score: 137 bits (345), Expect = 2.930e-35
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            V+E L  P+ ++V +YR +VVGCA   P GYI ++AV+ GW    +A+FML+ L+Q    RD+TLHVSA NPAM+LYQQFGFKPE ++VNF+ +YLPP+S  C +A L+R R
Sbjct:  884 VAEHLMYPDYSIVVMYRRLVVGCAFMTPEGYITYIAVRPGWGGQGLARFMLYYLIQILPSRDITLHVSANNPAMILYQQFGFKPEEFVVNFFDKYLPPESRDCKNAFLVRLR 995          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A433Q6K9_9FUNG (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q6K9_9FUNG)

HSP 1 Score: 130 bits (328), Expect = 4.130e-35
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            VSE LQ P+ +VVALYR +VVGCA   P  Y+ +V V  GW  + I +FML+ L+QT   +DVTLHVSA N AM+LYQ+FGFKPE ++V FY +YLPP+S  C +A  +R R
Sbjct:  175 VSENLQFPDFSVVALYRRLVVGCAFMTPEAYVTYVTVVPGWEGAGIGQFMLYHLIQTSIGKDVTLHVSANNSAMILYQKFGFKPEEFVVGFYDKYLPPESVACKNAFFVRLR 286          
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Match: A0A168HDI8_MUCCL (N-acetyltransferase domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168HDI8_MUCCL)

HSP 1 Score: 127 bits (318), Expect = 5.820e-35
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 1
Query:    1 VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFMLFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDSPHCPHALLLRRR 336
            VSE L  PE ++VALY+  V+GCA   P  YI + AV+ GW  + I +FML+ L QT   +D+TLHVSA N AM+LYQ+FGFKPE +IVNFY +YLP DS    +A  LR R
Sbjct:   55 VSESLLFPEFSIVALYKRRVIGCAFMTPEAYITYFAVEPGWTNASIGQFMLYHLFQTAISKDITLHVSANNNAMILYQKFGFKPEEFIVNFYDKYLPTDSVFSKNAFFLRLR 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117966.3724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A507CBE5_9FUNG1.720e-4058.93N-acetyltransferase domain-containing protein n=1 ... [more]
A0A1Y2BW85_9FUNG4.480e-3756.52N-acetyltransferase domain-containing protein (Fra... [more]
A0A397V239_9GLOM2.370e-3655.36N-acetyltransferase domain-containing protein n=2 ... [more]
A7SYB3_NEMVE4.000e-3655.17Predicted protein n=4 Tax=Nematostella vectensis T... [more]
A0A1Y1YTM9_9FUNG4.220e-3654.95N-acetyltransferase domain-containing protein n=2 ... [more]
A0A137P321_CONC27.370e-3654.87N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0L0S578_ALLM32.120e-3558.04N-acetyltransferase domain-containing protein n=2 ... [more]
A0A507C954_9FUNG2.930e-3554.46N-acetyltransferase domain-containing protein n=1 ... [more]
A0A433Q6K9_9FUNG4.130e-3555.36N-acetyltransferase domain-containing protein (Fra... [more]
A0A168HDI8_MUCCL5.820e-3554.46N-acetyltransferase domain-containing protein n=2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117966contigM-pyrifera_M_contig117966:45..471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score138.3
Seed ortholog evalue2.3e-30
Seed eggNOG ortholog28583.AMAG_03261T1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs38CAF@33154,3NZ4D@4751,COG0456@1,KOG3138@2759
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons2
Model size345
Cds size345
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815698.537426-CDS-M-pyrifera_M_contig117966:44..2121622815698.537426-CDS-M-pyrifera_M_contig117966:44..212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117966 45..212 +
1692277527.3910382-CDS-M-pyrifera_M_contig117966:44..2121692277527.3910382-CDS-M-pyrifera_M_contig117966:44..212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117966 45..212 +
1622815698.54885-CDS-M-pyrifera_M_contig117966:294..4711622815698.54885-CDS-M-pyrifera_M_contig117966:294..471Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117966 295..471 +
1692277527.4007993-CDS-M-pyrifera_M_contig117966:294..4711692277527.4007993-CDS-M-pyrifera_M_contig117966:294..471Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117966 295..471 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117966.3724.1prot_M-pyrifera_M_contig117966.3724.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117966 45..471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117966.3724.1

>prot_M-pyrifera_M_contig117966.3724.1 ID=prot_M-pyrifera_M_contig117966.3724.1|Name=mRNA_M-pyrifera_M_contig117966.3724.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
VSECLQCPEATVVALYRHMVVGCAMALPSGYIAFVAVQRGWRRSRIAKFM
LFQLLQTFGPRDVTLHVSATNPAMLLYQQFGFKPETYIVNFYARYLPPDS
PHCPHALLLRRRHG*
back to top

mRNA from alignment at M-pyrifera_M_contig117966:45..471+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117966.3724.1 ID=mRNA_M-pyrifera_M_contig117966.3724.1|Name=mRNA_M-pyrifera_M_contig117966.3724.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=427bp|location=Sequence derived from alignment at M-pyrifera_M_contig117966:45..471+ (Macrocystis pyrifera P11B4 male)
GTCTCGGAGTGTCTGCAATGCCCAGAGGCGACCGTCGTGGCTCTGTATCG CCACATGGTTGTTGGATGTGCAATGGCATTGCCGTCCGGGTATATTGCGT TCGTGGCGGTGCAGAGGGGGTGGCGGCGATCTCGTATCGCGAAGTTTATG TTGTTTCAGCTGCTGCAGGTGCGGGCGGTTGTGTATGTGTGTGTGTGTGC ACGCGTGCTCGCGTACGCTCATCCACTCACTTTCCTTGGTTGCACAACAG ACGTTTGGCCCACGAGACGTGACTCTGCATGTGTCAGCAACCAACCCGGC GATGCTGCTGTACCAGCAGTTTGGCTTCAAACCGGAGACGTACATTGTGA ACTTCTACGCCAGATACCTGCCTCCCGATTCCCCACACTGTCCACACGCG CTGCTGCTTCGTCGTCGCCACGGGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig117966:45..471+

>mRNA_M-pyrifera_M_contig117966.3724.1 ID=mRNA_M-pyrifera_M_contig117966.3724.1|Name=mRNA_M-pyrifera_M_contig117966.3724.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig117966:45..471+ (Macrocystis pyrifera P11B4 male)
GTCTCGGAGTGTCTGCAATGCCCAGAGGCGACCGTCGTGGCTCTGTATCG
CCACATGGTTGTTGGATGTGCAATGGCATTGCCGTCCGGGTATATTGCGT
TCGTGGCGGTGCAGAGGGGGTGGCGGCGATCTCGTATCGCGAAGTTTATG
TTGTTTCAGCTGCTGCAGGTCTCGGAGTGTCTGCAATGCCCAGAGGCGAC
CGTCGTGGCTCTGTATCGCCACATGGTTGTTGGATGTGCAATGGCATTGC
CGTCCGGGTATATTGCGTTCGTGGCGGTGCAGAGGGGGTGGCGGCGATCT
CGTATCGCGAAGTTTATGTTGTTTCAGCTGCTGCAGACGTTTGGCCCACG
AGACGTGACTCTGCATGTGTCAGCAACCAACCCGGCGATGCTGCTGTACC
AGCAGTTTGGCTTCAAACCGGAGACGTACATTGTGAACTTCTACGCCAGA
TACCTGCCTCCCGATTCCCCACACTGTCCACACGCGCTGCTGCTTCGTCG
TCGCCACGGGTAGACGTTTGGCCCACGAGACGTGACTCTGCATGTGTCAG
CAACCAACCCGGCGATGCTGCTGTACCAGCAGTTTGGCTTCAAACCGGAG
ACGTACATTGTGAACTTCTACGCCAGATACCTGCCTCCCGATTCCCCACA
CTGTCCACACGCGCTGCTGCTTCGTCGTCGCCACGGGTAG
back to top