mRNA_M-pyrifera_M_contig117940.3710.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A351ISZ8_9ACTN (Murein biosynthesis integral membrane protein MurJ (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ISZ8_9ACTN) HSP 1 Score: 171 bits (432), Expect = 2.990e-49 Identity = 95/183 (51.91%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGSDPSPERISTLLAIAVGVGSV 549
+RE+L+ + LG PAADAF A+++PN++QNLLGEGSLSASF+PVY+RL+ E + EA RVAG + GLLT +V ++ A P+ + APG D V L RIT G+GLL LSAWCLG+LN+HR +F+ YVAP LWN AQ+ VL A A FG D SP R +T LA + G V
Sbjct: 36 VRESLLRSVLGLGPAADAFAAALRIPNLLQNLLGEGSLSASFIPVYSRLLGEGRDDEAGRVAGAVAGLLTAMAGILVVASILLARPLAVLLAPGFEGHRLDLTVDLLRITTGGLGLLVLSAWCLGVLNSHRRFFLPYVAPVLWNAAQVAVL-----AVAAFG-DWSPRRAATALAWGLVAGGV 212
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A382VBL2_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VBL2_9ZZZZ) HSP 1 Score: 167 bits (423), Expect = 3.440e-49 Identity = 91/175 (52.00%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGSDPSPERISTLLA 525
+RE+L+ + L PAADAF A+++PN++QNLLGEGSLSASF+PVY+RL+ E EA RVA + GLLT +V + +VAA P+ + APG + D V L RIT G+GLL LSAWCLG+LN+H +F+ YVAP LWNVAQI VL A D SP R +T LA
Sbjct: 31 LRESLLRSVLALGPAADAFAAALRIPNLLQNLLGEGSLSASFIPVYSRLLGEGRREEAGRVAAAVAGLLTAVXXXLVVVAMVAARPLTRVLAPGFDGQRLDLTVDLIRITTAGLGLLVLSAWCLGVLNSHGRFFLPYVAPVLWNVAQIAVL------VAALAGDWSPSRAATGLA 199
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A3M2G0X9_ACTSX (Murein biosynthesis integral membrane protein MurJ (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G0X9_ACTSX) HSP 1 Score: 161 bits (408), Expect = 3.950e-47 Identity = 84/152 (55.26%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVV-AAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVL 453
+RE++I LG A DAFR A+++PN++QNLLGEGSLSASF+PVYA L+E + EARR+AG + G L +A+TGI+ ++ V AAG + I APG P T + + L R+T G+G L LSAWCLGILN+HR +F+SYVAP +WN AQI L
Sbjct: 42 VRESVIAHVLGVGVATDAFRNAVRIPNVLQNLLGEGSLSASFIPVYAGLLERDDPREARRLAGAVFGGL-MALTGILVVVGVGAAGALARIIAPGAPPATRELTIELLRVTTVGVGFLVLSAWCLGILNSHRRFFVSYVAPVVWNAAQIVAL 192
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A381T8D0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381T8D0_9ZZZZ) HSP 1 Score: 169 bits (427), Expect = 4.310e-47 Identity = 82/156 (52.56%), Postives = 113/156 (72.44%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVL 468
+RE+L+ LG PAADAF A+++PN++QNLLGEGSLSA+F+PVY+RL+ E + EA RVAG + GLLT G+ + ++AA P+ + APG + V L R+T G+GLL L+AWCLG+LN+HR +F+SYVAP LWNVAQ+ VL+ +L
Sbjct: 34 VRESLLRGVLGLGPAADAFAAALRIPNLLQNLLGEGSLSAAFIPVYSRLLGEGRQEEAGRVAGAVAGLLTALAGGLATVGILAARPLAHLLAPGFEGARMELTVDLIRVTTAGVGLLVLAAWCLGVLNSHRRFFLSYVAPVLWNVAQVAVLAAAIL 189
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A838E150_9ACTN (Probable lipid II flippase MurJ n=1 Tax=Euzebyales bacterium TaxID=2740540 RepID=A0A838E150_9ACTN) HSP 1 Score: 168 bits (426), Expect = 2.870e-46 Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGSDPSPERISTLLAIAVGVGSV 549
+REA++ LG + AADAFR AM++PN++QNLLGEG LSA+F+PVY+RL+ E + +A +VA +V + V+ AGP+ + A G++ E D V L RI PG+G L LSAWCLG+LN+HR +F+SYVAP +WNVAQIT L+G A G +P+ ++T LA+ +G V
Sbjct: 23 VREAVMAGYLGTSVAADAFRAAMRIPNLMQNLLGEGVLSAAFIPVYSRLLAEGRDDDAGKVAXXXXXXXXXXXGVLVLVGVILAGPLTDVIAAGMSGERRDLTVRLVRILFPGVGFLVLSAWCLGVLNSHRRFFLSYVAPVIWNVAQITALAGAAWWLARGGEEPALATLATALAVGAAIGGV 205
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A2E5P339_9ACTN (Probable lipid II flippase MurJ n=2 Tax=root TaxID=1 RepID=A0A2E5P339_9ACTN) HSP 1 Score: 168 bits (426), Expect = 2.870e-46 Identity = 95/183 (51.91%), Postives = 121/183 (66.12%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGSDPSPERISTLLAIAVGVGSV 549
+RE+L+ + L PAADAF A+++PN++QNLLGEGSLSASF+PVY+R + E + EA RVAG + GLL G V + +V A P+ APG D V L RIT G+GLL LSAWCLG+LN+HR +F+ YVAP LWN+AQI VL AAA FG D SP + + LA + VG V
Sbjct: 33 VRESLLRSVLALGPAADAFAAALRIPNLLQNLLGEGSLSASFIPVYSRXLGEGXDDEAGRVAGAVAGLLXALAGGXVVVAIVLAXPLTVXLAPGFEGXRLDLTVDLMRITTGGLGLLVLSAWCLGVLNSHRRFFLPYVAPVLWNIAQIAVL-----AAAAFG-DWSPRQAAVALAWGLVVGGV 209
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A381XWB5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381XWB5_9ZZZZ) HSP 1 Score: 164 bits (415), Expect = 4.870e-46 Identity = 80/157 (50.96%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLA 471
+RE+L+ + L PAADAF A+++PN++QNLLGEGSLSASF+PVY+RL+ E + EA +VAG + GL+ V G+ ++ A P+ S+ APG H+ + L R+T GIG L LSAWCLG+LN+HR +F+ YVAP LWN AQI VL+ ++A
Sbjct: 32 LRESLLRSVLALGPAADAFGAALRIPNVLQNLLGEGSLSASFIPVYSRLLGEGRDEEAGKVAGAVAGLMAVLSGGLALFGIIFARPLTSLLAPGFDGARHELTIDLIRVTTAGIGFLVLSAWCLGVLNSHRRFFLPYVAPVLWNAAQIVVLAAALVA 188
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A3D5K527_9ACTN (Probable lipid II flippase MurJ n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K527_9ACTN) HSP 1 Score: 167 bits (424), Expect = 5.930e-46 Identity = 96/182 (52.75%), Postives = 122/182 (67.03%), Query Frame = 1
Query: 4 REALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGSDPSPERISTLLAIAVGVGSV 549
RE+L+ + L PAADAF A+++PN++QNLLGEGSLSASF+PVY+RL+ E EA +VA + GLLT G+V + +V A P+ ++ APG D V L RIT G+GLL LSAWCLGILN+H +F+ YVAP LWNVAQI VL AA+ G D SP R +T LA + VG V
Sbjct: 32 RESLLRSVLALGPAADAFAAALRIPNLLQNLLGEGSLSASFIPVYSRLLGEGRRDEAGKVAAAVAGLLTALAGGLVVVAIVVARPLATLLAPGFKGARLDLTVDLLRITTGGLGLLVLSAWCLGILNSHGRFFLPYVAPVLWNVAQIAVL-----VAALTG-DWSPTRTATGLAWGLVVGGV 207
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A800LQV5_9ACTN (Probable lipid II flippase MurJ n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LQV5_9ACTN) HSP 1 Score: 168 bits (425), Expect = 6.960e-46 Identity = 92/181 (50.83%), Postives = 124/181 (68.51%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALMVV-AAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVLSGVVLAAAMFGS-DPSPERISTLLAIAVG 537
+RE+L+ + L PAADAF A+++PNI+QNLLGEGSLSASF+PVY+RL+ E E EA RVAG + GLL A+ G+ A++ + AA P+ ++ PG + + + V L RIT G G+L +SAWCLG+LN+HR++F+SYVAP LWNVAQI VL AA+FG DP + VG
Sbjct: 88 VRESLLRSVLALGPAADAFAAALRIPNILQNLLGEGSLSASFIPVYSRLLSEDKEEEAARVAGAVAGLLA-ALAGVFAVIAIFAARPLTALLTPGFSGQRFELTVDLMRITTAGAGILVVSAWCLGVLNSHRQFFLSYVAPVLWNVAQIAVL-----VAALFGGWDPVDAATGVAWGLVVG 262
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Match: A0A0C1UP61_9ACTN (Probable lipid II flippase MurJ n=1 Tax=marine actinobacterium MedAcidi-G2B TaxID=1550401 RepID=A0A0C1UP61_9ACTN) HSP 1 Score: 166 bits (421), Expect = 9.050e-46 Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 1 IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVEERNEVEARRVAGGILGLLTVAITGIVALM-VVAAGPIISITAPGLTPETHDQAVWLTRITAPGIGLLGLSAWCLGILNAHREYFISYVAPALWNVAQITVL 453
IRE+L+ +TL PAADAF A+++PN++QNLLGEGSLSASF+PVY++L+ E + EAR+ AG LGLL+ AI+G++ L+ V+AA PI +I APG ++ V L RIT GIG L LSAWCLG+LN+HR++F+SYVAP WN+AQI VL
Sbjct: 14 IRESLLRSTLALGPAADAFAAALRIPNLLQNLLGEGSLSASFIPVYSKLLGEGRKEEARKAAGATLGLLS-AISGLLVLIGVLAARPIAAILAPGFDNSRYELTVDLLRITFIGIGALVLSAWCLGVLNSHRKFFLSYVAPVFWNIAQIVVL 164 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117940.3710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117940.3710.1 >prot_M-pyrifera_M_contig117940.3710.1 ID=prot_M-pyrifera_M_contig117940.3710.1|Name=mRNA_M-pyrifera_M_contig117940.3710.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp IREALIGATLGATPAADAFRTAMKVPNIVQNLLGEGSLSASFVPVYARLVback to top mRNA from alignment at M-pyrifera_M_contig117940:3..551- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117940.3710.1 ID=mRNA_M-pyrifera_M_contig117940.3710.1|Name=mRNA_M-pyrifera_M_contig117940.3710.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig117940:3..551- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117940:3..551- >mRNA_M-pyrifera_M_contig117940.3710.1 ID=mRNA_M-pyrifera_M_contig117940.3710.1|Name=mRNA_M-pyrifera_M_contig117940.3710.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig117940:3..551- (Macrocystis pyrifera P11B4 male)back to top |