prot_M-pyrifera_M_contig11785.3694.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig11785.3694.1
Unique Name	prot_M-pyrifera_M_contig11785.3694.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	101

Homology

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A836CI02_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI02_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.720e-21
Identity = 53/97 (54.64%), Postives = 61/97 (62.89%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            R+GQLL  G L DI A+PTS RT EQA  LGIPLTTLD+     +DVAIDGADT +  T  LVKGG                F+VIVD SK+ADG+G
Sbjct:   81 RLGQLLKDGTLKDIIAIPTSIRTKEQAEGLGIPLTTLDSHPN--IDVAIDGADTVDNATLALVKGGGGALLREKIVEVQAKEFIVIVDESKMADGVG 175

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A7S0JD86_9EUKA (Ribose-5-phosphate isomerase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JD86_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 1.580e-20
Identity = 56/97 (57.73%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVGQ LASG+L+DI AVPTS RT EQA SLGIPL TLD    + LDVAIDGAD  + +   LVKGG                F+VIVD SKL DGLG
Sbjct:   85 RVGQKLASGELSDILAVPTSVRTKEQAESLGIPLVTLDTH--SDLDVAIDGADEVDPD-LNLVKGGGGALLREKMVEVCAKKFIVIVDESKLCDGLG 178

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A7S2JKY9_9EUKA (Ribose-5-phosphate isomerase (Fragment) n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JKY9_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 4.730e-20
Identity = 56/99 (56.57%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDA--ERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVG+LL SG LTDI A+PTS RT EQA +LGIPLTTL     R + LDVAIDGAD  + E   LVKGG                F+VIVD SKL DGLG
Sbjct:   84 RVGELLKSGKLTDIVAIPTSVRTKEQAEALGIPLTTLGTPESRYSDLDVAIDGADEVDPE-LNLVKGGGGALLREKMVEVCAKKFIVIVDESKLCDGLG 181

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A7S1AKJ2_NOCSC (Ribose-5-phosphate isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AKJ2_NOCSC)

HSP 1 Score: 90.1 bits (222), Expect = 5.480e-20
Identity = 55/97 (56.70%), Postives = 61/97 (62.89%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVGQ L SG+L DI AVPTS RT EQA SLGIPLTTLD+   + LDVAIDGAD  +     LVKGG                F+VIVD SKL +GLG
Sbjct:   40 RVGQKLKSGELVDILAVPTSIRTKEQAESLGIPLTTLDSH--SDLDVAIDGADGVD-PALNLVKGGGGAHFREKIVELSAKKFIVIVDESKLVEGLG 133

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: K0SNV8_THAOC (Ribose-5-phosphate isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNV8_THAOC)

HSP 1 Score: 90.5 bits (223), Expect = 6.700e-20
Identity = 54/97 (55.67%), Postives = 61/97 (62.89%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            R+G+ L SG+LTDI A+PTS RT EQA SLGIPL TLD    + LDVAIDGAD  +   F LVKGG                F+VIVD SKL DGLG
Sbjct:   40 RLGEKLKSGELTDIVAIPTSIRTKEQAESLGIPLVTLDTH--SKLDVAIDGADNVD-PGFNLVKGGGGALLREKMVELAADTFIVIVDESKLCDGLG 133

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A7S3ATH6_9EUKA (Ribose-5-phosphate isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATH6_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 1.380e-19
Identity = 54/97 (55.67%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVGQLL  G L DI A+PTS RT EQA  LGIPL+TLD    + LDVAIDGAD  + + F LVKGG                F+VIVD SKL DGLG
Sbjct:   16 RVGQLLKEGTLKDIIAIPTSVRTKEQAEELGIPLSTLDEY--SDLDVAIDGADEVDPD-FNLVKGGGGALLREKMVEVCAKKFIVIVDESKLCDGLG 109

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A7S0CHS3_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHS3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.670e-19
Identity = 53/97 (54.64%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            R+GQLL+SG+L DI A+PTS RT EQA SLGIPL TLD    + LDVAIDGAD  + +   LVKGG                F+VIVD SKL +GLG
Sbjct:   74 RLGQLLSSGELKDIVAIPTSIRTKEQAESLGIPLVTLDTH--SKLDVAIDGADEVDPD-LNLVKGGGGALLREKMVEVCADKFIVIVDESKLCEGLG 167

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A835YQR3_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.530e-19
Identity = 54/97 (55.67%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVGQLLA+G L DI AVPTSERT   A  L IPL TLD      LDVAIDGADT +  T  LVKGG                 VVIVD SKL++GLG
Sbjct:   91 RVGQLLANGKLKDIVAVPTSERTRAHAAQLSIPLATLDEHPA--LDVAIDGADTVDRGTLALVKGGGGALLREKIVEVAAKKLVVIVDESKLSEGLG 185

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A6T5NRP6_HETAK (Ribose-5-phosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NRP6_HETAK)

HSP 1 Score: 88.6 bits (218), Expect = 3.560e-19
Identity = 53/97 (54.64%), Postives = 61/97 (62.89%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            R+G+L+ASG+L DI A+PTS RT EQA SLGIPL TLD    + LDVAIDGAD  + E   LVKG                 F+VIVD SKL DGLG
Sbjct:   77 RLGELMASGELKDIVAIPTSVRTKEQAESLGIPLVTLDTH--SDLDVAIDGADEVDPE-LNLVKGRGGALLREKMVEVCAKKFIVIVDDSKLVDGLG 170

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BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Match: A0A448ZPR4_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPR4_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.850e-19
Identity = 54/97 (55.67%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    1 RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAIDGADTANLETFGLVKGGXXXXXXXXXXXXXXXXFVVIVDGSKLADGLG 97
            RVG LL SG+L DI A+PTSERT EQA SL IPL TLD    + LDVAIDGAD  + +   LVKGG                F+VIVD SKL DGLG
Sbjct:   76 RVGNLLKSGELKDIVAIPTSERTKEQALSLDIPLVTLDTH--SKLDVAIDGADEVDPD-LNLVKGGGGALLREKMVEVMADKFIVIVDESKLCDGLG 169

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig11785.3694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CI02_9STRA	4.720e-21	54.64	Ribose-5-phosphate isomerase n=1 Tax=Tribonema min...	[more]
A0A7S0JD86_9EUKA	1.580e-20	57.73	Ribose-5-phosphate isomerase n=1 Tax=Calcidiscus l...	[more]
A0A7S2JKY9_9EUKA	4.730e-20	56.57	Ribose-5-phosphate isomerase (Fragment) n=2 Tax=Ha...	[more]
A0A7S1AKJ2_NOCSC	5.480e-20	56.70	Ribose-5-phosphate isomerase n=1 Tax=Noctiluca sci...	[more]
K0SNV8_THAOC	6.700e-20	55.67	Ribose-5-phosphate isomerase n=1 Tax=Thalassiosira...	[more]
A0A7S3ATH6_9EUKA	1.380e-19	55.67	Ribose-5-phosphate isomerase n=1 Tax=Haptolina eri...	[more]
A0A7S0CHS3_9STRA	2.670e-19	54.64	Ribose-5-phosphate isomerase n=1 Tax=Proboscia ine...	[more]
A0A835YQR3_9STRA	3.530e-19	55.67	Ribose-5-phosphate isomerase n=1 Tax=Tribonema min...	[more]
A0A6T5NRP6_HETAK	3.560e-19	54.64	Ribose-5-phosphate isomerase n=1 Tax=Heterosigma a...	[more]
A0A448ZPR4_9STRA	3.850e-19	55.67	Ribose-5-phosphate isomerase n=1 Tax=Pseudo-nitzsc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1360		coord: 1..98 e-value: 5.0E-30 score: 106.0
None	No IPR available	PANTHER	PTHR43748	FAMILY NOT NAMED	coord: 2..98
None	No IPR available	PANTHER	PTHR43748:SF3	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 2..98
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 16..97 e-value: 4.8E-27 score: 94.7
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 5..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig11785	contig	M-pyrifera_M_contig11785:8600..8902 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig11785.3694.1	mRNA_M-pyrifera_M_contig11785.3694.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig11785 8600..8902 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig11785.3694.1 ID=prot_M-pyrifera_M_contig11785.3694.1|Name=mRNA_M-pyrifera_M_contig11785.3694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
RVGQLLASGDLTDIRAVPTSERTAEQARSLGIPLTTLDAERGAPLDVAID
GADTANLETFGLVKGGGGALLREKLVAAAAKKFVVIVDGSKLADGLGAAL
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004788	Ribose5P_isomerase_typA
IPR037171	NagB/RpiA_transferase-like