mRNA_M-pyrifera_M_contig11782.3688.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: D7FY10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY10_ECTSI) HSP 1 Score: 321 bits (822), Expect = 1.590e-108 Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
MGV INACSLSQLR++A+EAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSR+HTHIGSGSDPAVWQKVSGMSLDLVRQFP VTTLNLGGGYK GRMSGE+STDLQAIGAPV GDF FAEETGR+LKLEIEPGTFLVANAGS+VCT Q
Sbjct: 1 MGVDINACSLSQLRKIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQ 170
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE) HSP 1 Score: 318 bits (814), Expect = 7.990e-104 Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
MGV INACSLSQLRR+A+EAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSR+HTHIGSGSDPAVWQKVSGMSLDLVRQFP VTTLNLGGGYK GRMSGE+STDLQAIGAPV DF FA+ETGR+LKLEIEPGTFLVANAGS+VCT Q
Sbjct: 265 MGVDINACSLSQLRRIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMEDFEAFAQETGRKLKLEIEPGTFLVANAGSLVCTAQ 434
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA) HSP 1 Score: 261 bits (668), Expect = 5.700e-83 Identity = 128/170 (75.29%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
+G+ INACSL QLRR ++ PGS VG+RFNPGLGSGGT TNVGGPSSSFGIW+E AD+V I DL V R+HTHIGSGSDPAVWQ+VSGMSLDLVR+FPDV+ LNLGGGYK GRMS E STDL +GAPVK FV FAEETGREL LEIEPGTFLVANAG++VC+VQ
Sbjct: 168 LGLKINACSLQQLRRFGEKFPGSEVGIRFNPGLGSGGTGKTNVGGPSSSFGIWHELADDVAAIAEEFDLKVVRIHTHIGSGSDPAVWQRVSGMSLDLVRRFPDVSILNLGGGYKVGRMSDEGSTDLSVVGAPVKDQFVAFAEETGRELHLEIEPGTFLVANAGAVVCSVQ 337
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7S3C547_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C547_9VIRI) HSP 1 Score: 251 bits (641), Expect = 2.790e-80 Identity = 124/170 (72.94%), Postives = 138/170 (81.18%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
+GV INACSLSQL+R + PG+ VG+RFNPGLGSGGT TNVGGPSSSFGIW+E E + I L V R+HTHIGSGSDPAVWQKVSGMSLDLVRQFP+V TLNLGGGYK GRM+GE STDL +GAPV F FAEETGREL LEIEPGTFL+ANAG++V TVQ
Sbjct: 58 LGVKINACSLSQLQRFGEACPGAEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPETQRIAEEHGLKVVRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPEVATLNLGGGYKVGRMAGEASTDLDVVGAPVADAFKAFAEETGRELHLEIEPGTFLLANAGALVSTVQ 227
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7S2CVR2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVR2_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.370e-79 Identity = 122/170 (71.76%), Postives = 136/170 (80.00%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
MG+ +NACSLSQLR + PG+ VG+RFNPGLGSGGT TNVGGPSSSFGIWYEW +E I A +L V RVHTHIGSGSDPAVWQK +GMS+DL R FPDV TLNLGGGYK RM+ ++ TDLQ GAPVK F KFAEETGREL LEIEPGTFLVAN G++V TVQ
Sbjct: 95 MGIKVNACSLSQLRAFGEALPGADVGLRFNPGLGSGGTGKTNVGGPSSSFGIWYEWEEECAAIAAEHNLKVVRVHTHIGSGSDPAVWQKTAGMSIDLCRNFPDVVTLNLGGGYKVARMATDKFTDLQECGAPVKEIFTKFAEETGRELHLEIEPGTFLVANTGAVVSTVQ 264
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7R9Y6N3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6N3_9VIRI) HSP 1 Score: 249 bits (636), Expect = 1.690e-78 Identity = 125/170 (73.53%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 1 MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
+GV +NACSL QLRR PG VG+RFNPGLGSGGT TNVGGPSSSFGIW+E E +EI A DL V R+HTHIGSGSDPAVWQKVSGMSLDL RQFPDVT LNLGGGYK GRMS E STDLQ +G PV F FAEETGREL LEIEPGTFL+ANAG++V VQ
Sbjct: 142 LGVKVNACSLEQLRRFGAAFPGGEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHESLPECQEIAAAHDLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCRQFPDVTHLNLGGGYKVGRMSYEASTDLQVVGEPVTDAFRAFAEETGRELALEIEPGTFLLANAGALVTAVQ 311
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A096P9M8_OSTTA (Orn/DAP/Arg decarboxylase 2, N-terminal n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P9M8_OSTTA) HSP 1 Score: 249 bits (635), Expect = 2.720e-78 Identity = 126/169 (74.56%), Postives = 136/169 (80.47%), Query Frame = 1
Query: 4 GVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
GV INACSL QL R PG +GVRFNPGLGSGGT TNVGGPSSSFGIWYE VKEI A +L V RVHTHIGSGSDPAVWQKVSGMSLDL R+FPDVTTLNLGGGYK GRMS E+STDL +G PVK F KFAEETGR+LKLEIEPGTFL+AN+ ++V VQ
Sbjct: 150 GVRINACSLDQLERFGAAFPGGEIGVRFNPGLGSGGTGKTNVGGPSSSFGIWYELLPRVKEIVAEYNLKVVRVHTHIGSGSDPAVWQKVSGMSLDLCREFPDVTTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEKFAEETGRKLKLEIEPGTFLLANSCAVVTRVQ 318
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7S0WW88_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WW88_9CHLO) HSP 1 Score: 249 bits (637), Expect = 4.730e-78 Identity = 123/169 (72.78%), Postives = 139/169 (82.25%), Query Frame = 1
Query: 4 GVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
GV +N CSLSQL R Q PG+ VGVRFNPG+GSGG K TNVGG SSSFGIW+E EV+ I A +LTV R+HTHIGSGSDPAVWQKVSGMSLD+ RQFPDV TLNLGGGYK GRM GE STDL+ IG PV G+F +FAEETGR+L+LEIEPGTFL+AN+ S+V TVQ
Sbjct: 196 GVKVNCCSLSQLERYGQALPGTKVGVRFNPGMGSGGNKKTNVGGTSSSFGIWHESLPEVQAIAAKYNLTVERIHTHIGSGSDPAVWQKVSGMSLDICRQFPDVETLNLGGGYKVGRMEGEPSTDLELIGNPVVGEFEQFAEETGRKLRLEIEPGTFLMANSCSVVSTVQ 364
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: A0A7S0ZA73_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0ZA73_9CHLO) HSP 1 Score: 244 bits (622), Expect = 7.770e-78 Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 1
Query: 4 GVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
GV +NACSLSQL R + PG VGVRFNPGLGSGGT TNVGGPSSSFGIWYE +VKEI L V R+HTHIGSGSDPAVWQKVSGMSLDL R+FP VTTLNLGGGYK GRMS E+STDLQ +G PVK F FA++TGR+LKLEIEPGTFL+AN+ ++V +VQ
Sbjct: 45 GVKVNACSLSQLERFGEVFPGGEVGVRFNPGLGSGGTGKTNVGGPSSSFGIWYESLPKVKEIVEKYKLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCREFPGVTTLNLGGGYKVGRMSYEKSTDLQVVGVPVKEAFEAFAKDTGRQLKLEIEPGTFLLANSCAVVTSVQ 213
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Match: C1E2J1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2J1_MICCC) HSP 1 Score: 245 bits (626), Expect = 2.880e-77 Identity = 123/169 (72.78%), Postives = 136/169 (80.47%), Query Frame = 1
Query: 4 GVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPDVTTLNLGGGYKTGRMSGEESTDLQAIGAPVKGDFVKFAEETGRELKLEIEPGTFLVANAGSMVCTVQ 510
G+ +NACSLSQL PG+ VG+RFNPGLGSGGT TNVGGPSSSFGIW+E E KEI L V R+HTHIGSGSDPAVWQK SGMSLDL RQFP V TLNLGGGYK GRMS E+STDLQ +G+PVK F KFAEETGRELKLEIEPGTFL+AN+ ++VCTVQ
Sbjct: 118 GLKVNACSLSQLEAYGIMFPGAKVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPEAKEIVERHGLIVDRIHTHIGSGSDPAVWQKTSGMSLDLCRQFPTVETLNLGGGYKVGRMSYEKSTDLQVVGSPVKELFQKFAEETGRELKLEIEPGTFLLANSCAVVCTVQ 286 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11782.3688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11782.3688.1 >prot_M-pyrifera_M_contig11782.3688.1 ID=prot_M-pyrifera_M_contig11782.3688.1|Name=mRNA_M-pyrifera_M_contig11782.3688.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MGVGINACSLSQLRRLAQEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFback to top mRNA from alignment at M-pyrifera_M_contig11782:5110..9502+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11782.3688.1 ID=mRNA_M-pyrifera_M_contig11782.3688.1|Name=mRNA_M-pyrifera_M_contig11782.3688.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4393bp|location=Sequence derived from alignment at M-pyrifera_M_contig11782:5110..9502+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11782:5110..9502+ >mRNA_M-pyrifera_M_contig11782.3688.1 ID=mRNA_M-pyrifera_M_contig11782.3688.1|Name=mRNA_M-pyrifera_M_contig11782.3688.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig11782:5110..9502+ (Macrocystis pyrifera P11B4 male)back to top |