mRNA_M-pyrifera_M_contig1178.3675.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: D7FVQ4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ4_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 8.870e-135 Identity = 213/237 (89.87%), Postives = 224/237 (94.51%), Query Frame = 1
Query: 1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR 711
RGVNFRAL ELF+LS+QD KEFQFRVSMLEVYNESIKDL VEPGRP +ANKHD+RLDK+G+VYVEGLVEC VETLEEVEEL +LGGRNRTVGNNNVNEHSSRSHLVLQV I STD+ TGYVQHG+LNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVIN+LGSG+KHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLG SRRLG R
Sbjct: 912 RGVNFRALGELFSLSNQDHTKEFQFRVSMLEVYNESIKDLFVEPGRPAAAANKHDVRLDKKGRVYVEGLVECEVETLEEVEELVVLGGRNRTVGNNNVNEHSSRSHLVLQVHITSTDVATGYVQHGKLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINSLGSGSKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGTSRRLGGR 1148
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A835Z6H9_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H9_9STRA) HSP 1 Score: 332 bits (850), Expect = 4.360e-103 Identity = 170/235 (72.34%), Postives = 195/235 (82.98%), Query Frame = 1
Query: 1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLG 705
RGVNFRALAELF + D + + F VSMLEVYNE I+DLL + N+H+IRLD+RG+VYVEGLVEC V L+EVE L LGGRNRTVGNNNVN HSSRSHLVLQV +A+T +G VQ GRL+LIDLAGSER+KSTAAEGQ+LKEAQNINRSLSALGDVI ALG+G++HVPYRNSKLTFLLQDSL + AKVLMFVN++P P SQGES CSLNFAKRCR+VQLG ++RL
Sbjct: 581 RGVNFRALAELFGRARDDATRSYAFTVSMLEVYNEEIRDLLAPASAAAAAENRHEIRLDRRGQVYVEGLVECAVTALDEVERLVELGGRNRTVGNNNVNLHSSRSHLVLQVAVAATYSASGAVQAGRLSLIDLAGSERLKSTAAEGQRLKEAQNINRSLSALGDVIAALGAGSRHVPYRNSKLTFLLQDSLGAGAKVLMFVNVSPHPASQGESVCSLNFAKRCRAVQLGQAKRLS 815
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S1TQ83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ83_9STRA) HSP 1 Score: 273 bits (697), Expect = 1.410e-78 Identity = 156/247 (63.16%), Postives = 184/247 (74.49%), Query Frame = 1
Query: 1 RGVNFRALAELFALSSQ-DEGKEFQFRVSMLEVYNESIKDLLVEPGRPIT-----------SANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLG 705
RGVNFRAL LF L+ E E F+VSMLEVYNE I+DLL PG P + S+ R K+G V+VEGL+EC V ++EVEE+ LGG +R+ +NNVNEHSSRSHLVLQV++ L G QHG L+LIDLAGSER+K+T+A+GQ+LKEAQNIN+SLSALGDVI ALGS HVPYRNSKLTFLLQDSL ++KVLMFVNINPA S GES+CSLNFA RCRSVQLG +RR+G
Sbjct: 1051 RGVNFRALKHLFDLAPVVGEEDEISFKVSMLEVYNEKIRDLLAPPGTPGSDDLSVRVLGGGSSGGSKRRGAKKG-VFVEGLLECEVNNVDEVEEIMSLGGEHRSTASNNVNEHSSRSHLVLQVKV----LRRGS-QHGLLSLIDLAGSERLKNTSAQGQRLKEAQNINKSLSALGDVIAALGSSQGHVPYRNSKLTFLLQDSLGPSSKVLMFVNINPAFNSAGESTCSLNFASRCRSVQLGPARRVG 1291
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2PFW9_9STRA (Kinesin-like protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFW9_9STRA) HSP 1 Score: 264 bits (674), Expect = 9.290e-77 Identity = 142/233 (60.94%), Postives = 170/233 (72.96%), Query Frame = 1
Query: 1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
RGVN RAL LF + + ++ F VS+LEVYNES++DLL K D+R+ G VYVEGL + VE+ +VE+L L NR NNN+N+ SSRSHLVL I T TG HG+LNLIDLAGSER+K+T AEG +LKEAQNINRSLSALGDV+ ALG+ +KHVPYRNSKLTFLLQ+SL +NAKVLMFVNINP+ + GES CSLNFAKRCRSVQLG +R+
Sbjct: 664 RGVNVRALESLFEIGKSSQDIDYTFSVSILEVYNESVRDLLSRENH-----TKLDVRMGSNG-VYVEGLTKHDVESGSDVEQLIALASSNRVTANNNINDLSSRSHLVLTCYITGTKTITGATIHGKLNLIDLAGSERLKNTEAEGLRLKEAQNINRSLSALGDVVAALGNNSKHVPYRNSKLTFLLQESLRTNAKVLMFVNINPSTDNAGESICSLNFAKRCRSVQLGKARK 890
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2WM98_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM98_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.420e-72 Identity = 122/170 (71.76%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 190 VYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
VYVEGL EC V++L VE+L GGRNR+VG+NNVN HSSRSHLVL V+I T +G HG+LNLIDLAGSER+KST AEGQ+LKEAQNIN+SLSALGDVINALG + HVPYRNSKL+FLLQDSLS++A+VLMFVNI PA +S GES CSLNFA RCR+VQLG +++
Sbjct: 10 VYVEGLTECQVDSLAAVEKLMSEGGRNRSVGSNNVNLHSSRSHLVLCVKIQGTS-HSGSTVHGKLNLIDLAGSERLKSTNAEGQRLKEAQNINKSLSALGDVINALGKNSTHVPYRNSKLSFLLQDSLSAHARVLMFVNITPALESAGESQCSLNFAGRCRAVQLGTAKK 178
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A2P4XLZ0_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLZ0_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.410e-71 Identity = 138/244 (56.56%), Postives = 176/244 (72.13%), Query Frame = 1
Query: 1 RGVNFRALAELFAL-SSQDEGKEFQ--FRVSMLEVYNESIKDLLVEPGRPITSANKH-----DIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGA 708
RGVNFRAL ELF++ + G F+ ++S+LEVYNE+I DLL GR I+ A+ D+R+ K G VYVE L+E V +V +L LG +R+VG+++ NEHSSRSHLVL ++I + + G + +L+LIDLAGSER+ TAA GQ+LKEAQNINRSLSALGDVI ALG+ +KHVPYRNSKLTFLLQDSLS N+KVLMFVN++P + E+ CSLNFA RCRSV LG ++ A
Sbjct: 159 RGVNFRALRELFSIRDDRMAGGNFECSMKLSILEVYNETIVDLLEGGGRTISGASPAVAKGLDVRVGKNG-VYVENLIEVEVFNEGDVLDLMRLGHSHRSVGSHDFNEHSSRSHLVLSIKIETGIKSDGRRRTSKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSKHVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKAATA 401
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2GFV3_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GFV3_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.300e-70 Identity = 130/233 (55.79%), Postives = 163/233 (69.96%), Query Frame = 1
Query: 1 RGVNFRALAELFALSSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRR 699
RGVN R + LF + + F +SMLEVYNE I DLL E ++R ++ ++YVEGLVE V ++ EVEE+ G R VGNN+VNEHSSRSHLVL V+I D T+ G+LNLIDLAGSER+K+T EG + +E ++INRSLSALGDV+ ALG G HVPYRNSKLTFLLQDSL +NA+VLMFVN+ P+ S ES+CSL FA+RCRSV+LG ++R
Sbjct: 234 RGVNMRTVQHLFDYADTNADSTCSFTISMLEVYNERIVDLLAEKE---DFPPDLEVRQGEKKQIYVEGLVELDVSSVAEVEEMTSRGMAQRHVGNNSVNEHSSRSHLVLTVKIKVKDKTSNKSHQGKLNLIDLAGSERLKNT--EGARAEETKHINRSLSALGDVVAALGRGGNHVPYRNSKLTFLLQDSLKANARVLMFVNVTPSAASANESACSLKFAERCRSVKLGSAKR 461
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2W0I4_9STRA (Kinesin-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0I4_9STRA) HSP 1 Score: 243 bits (620), Expect = 5.180e-70 Identity = 144/261 (55.17%), Postives = 175/261 (67.05%), Query Frame = 1
Query: 1 RGVNFRALAELFAL-SSQDEGKEFQFRVSMLEVYNESIKDLLVEPGR--PITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNK--HVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR*SLA*YTWLDRIIYVYLAD 768
RGVNFR+L ELF+L ++ E EF F +S LE+YNE I+DLLV+P R +K DIR G V V GL E V + +EV L G RTVG++++NEHSSRSH +L + LT G RLNLIDLAGSER+ T A G++LKEAQNINRSLSALGDVINALG K HVP+RNSKLT LLQDSLS N+KVLMF NI+PA + GE+ CSLNFA RCRSV+LG +R+ G L Y + + + LA
Sbjct: 468 RGVNFRSLEELFSLRDARAEEIEFSFVLSYLEIYNEQIRDLLVDPRRNGSADGKSKLDIRQSATGNV-VPGLTEVPVASTDEVAALMTRGAECRTVGSHDMNEHSSRSHSILTITAHGRSLTDGSTLTSRLNLIDLAGSERVSKTDATGERLKEAQNINRSLSALGDVINALGKKGKGGHVPFRNSKLTHLLQDSLSGNSKVLMFCNISPASYNVGETMCSLNFAARCRSVELGQARKGGESAELRKYKHMIQKLQDQLAS 727
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A7S2WAZ0_9STRA (Kinesin-like protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAZ0_9STRA) HSP 1 Score: 231 bits (589), Expect = 5.220e-67 Identity = 132/247 (53.44%), Postives = 169/247 (68.42%), Query Frame = 1
Query: 1 RGVNFRALAELFAL-SSQDEGKEFQFRVSMLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNK---HVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLGISRRLGAR*SLA*Y 729
RGVNFRAL +F + + + + +E VS+LE+YNE+++DLL E +K D+R++K GKV+V+GL E ++ +V + NR VG +N+NEHSSRSHLVL V I +T+ +G +G LNLIDLAGSERI T A G +LKEAQNIN+SLSALGDVI ALG G K HVPYRNSKLT LLQ+SL ++KV MFVNI+P + ES CSLNFA RCR VQLG +++ G L Y
Sbjct: 303 RGVNFRALERMFQIRNDRRDEEECSMTVSILEIYNETVRDLLGE------CRDKLDLRVNKEGKVFVQGLEENSANSMADVLNSMKIAQGNRAVGAHNMNEHSSRSHLVLTVHIETTNKVSGIKCNGSLNLIDLAGSERISKTDATGSRLKEAQNINKSLSALGDVIAALGEGGKKGQHVPYRNSKLTHLLQNSLGGDSKVAMFVNISPVRWNVSESICSLNFAARCRKVQLGQAKKNGDNQQLLKY 543
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Match: A0A3R7H6X9_9STRA (Kinesin-like protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H6X9_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.590e-66 Identity = 135/236 (57.20%), Postives = 168/236 (71.19%), Query Frame = 1
Query: 1 RGVNFRALAELFAL-SSQDEGKEF--QFRVSMLEVYNESIKDLLVEPGR----PITSANKHDIRLDKRGKVYVEGLVECVVETLEEVEELAILGGRNRTVGNNNVNEHSSRSHLVLQVQIASTDLTTGYVQHGRLNLIDLAGSERIKSTAAEGQQLKEAQNINRSLSALGDVINALGSGNKHVPYRNSKLTFLLQDSLSSNAKVLMFVNINPAPQSQGESSCSLNFAKRCRSVQLG 687
RGVNFRAL ELF++ + G F ++S+LEVYNE+I DLL GR + A D+R+ K G VYV+ L+E V +V +L LG +R+VG+++ NEHSSRSHLVL + I + G + +L+LIDLAGSER+ TAA GQ+LKEAQNINRSLSALGDVI ALG+ +KHVPYRNSKLTFLLQDSLS N+KVLMFVN++P + E+ CSLNFA RCRSV LG
Sbjct: 369 RGVNFRALRELFSIRDDRMAGGNFACSMKLSILEVYNETIMDLLEGGGRGTGQAASPAKGLDVRVGKTG-VYVDNLIEVEVFNEGDVLDLMRLGHSHRSVGSHDFNEHSSRSHLVLSILIETGLKAEGRRRVSKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGASSKHVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALG 603 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1178.3675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1178.3675.1 >prot_M-pyrifera_M_contig1178.3675.1 ID=prot_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp MLEVYNESIKDLLVEPGRPITSANKHDIRLDKRGKVYVEGLVECVVETLEback to top mRNA from alignment at M-pyrifera_M_contig1178:9350..12948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1178.3675.1 ID=mRNA_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3599bp|location=Sequence derived from alignment at M-pyrifera_M_contig1178:9350..12948- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1178:9350..12948- >mRNA_M-pyrifera_M_contig1178.3675.1 ID=mRNA_M-pyrifera_M_contig1178.3675.1|Name=mRNA_M-pyrifera_M_contig1178.3675.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig1178:9350..12948- (Macrocystis pyrifera P11B4 male)back to top |