prot_M-pyrifera_M_contig117798.3674.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117798.3674.1
Unique Nameprot_M-pyrifera_M_contig117798.3674.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length48
Homology
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Match: A0A383VRV5_TETOB (Transmembrane protein 231 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRV5_TETOB)

HSP 1 Score: 63.2 bits (152), Expect = 1.850e-10
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 SYRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDTFTVQD 48
            SYRP   E+LKW WVQ     W VW+LL WL RLVF HR+++T  + D
Sbjct:  258 SYRPSTSEMLKWGWVQFACALWPVWWLLRWLERLVFGHRVLETRVIAD 305          
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Match: A0A0S4J387_BODSA (Transmembrane protein 231 n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J387_BODSA)

HSP 1 Score: 53.1 bits (126), Expect = 7.490e-7
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 SYRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDTFTVQD 48
            SYRP  GE+LKWAWVQ F VA+++++ + W R L     +++T  V +
Sbjct:  290 SYRPGYGEILKWAWVQYFTVAYVIYWFVQWARWLFVKQALINTIAVWE 337          
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Match: W6KFF3_9TRYP (Transmembrane protein 231 n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KFF3_9TRYP)

HSP 1 Score: 47.8 bits (112), Expect = 6.070e-5
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 YRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDT 43
            YRP   E LK AWVQ FA+A+++ ++L W+R  V V+ +VDT
Sbjct:  274 YRPSFAEALKSAWVQYFAIAYVIQWVLWWVRGFVVVNGVVDT 315          
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Match: A0A7S3QT75_DUNTE (Transmembrane protein 231 n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QT75_DUNTE)

HSP 1 Score: 47.4 bits (111), Expect = 7.500e-5
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    1 SYRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDTFTVQD 48
            + RP V E+LK+AW+Q  A    +WF   WL+  VF +RI DT  V D
Sbjct:  190 TVRPQVIEMLKFAWIQFLATFVAIWFFFHWLQIFVFRYRIFDTRAVSD 237          
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Match: A0A7S3QTU9_DUNTE (Transmembrane protein 231 n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QTU9_DUNTE)

HSP 1 Score: 47.4 bits (111), Expect = 8.280e-5
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    1 SYRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDTFTVQD 48
            + RP V E+LK+AW+Q  A    +WF   WL+  VF +RI DT  V D
Sbjct:  258 TVRPQVIEMLKFAWIQFLATFVAIWFFFHWLQIFVFRYRIFDTRAVSD 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117798.3674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A383VRV5_TETOB1.850e-1054.17Transmembrane protein 231 n=1 Tax=Tetradesmus obli... [more]
A0A0S4J387_BODSA7.490e-743.75Transmembrane protein 231 n=1 Tax=Bodo saltans Tax... [more]
W6KFF3_9TRYP6.070e-550.00Transmembrane protein 231 n=1 Tax=Phytomonas sp. i... [more]
A0A7S3QT75_DUNTE7.500e-545.83Transmembrane protein 231 n=1 Tax=Dunaliella terti... [more]
A0A7S3QTU9_DUNTE8.280e-545.83Transmembrane protein 231 n=1 Tax=Dunaliella terti... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019306Transmembrane protein 231PFAMPF10149TM231coord: 2..44
e-value: 8.5E-8
score: 31.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117798contigM-pyrifera_M_contig117798:246..446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117798.3674.1mRNA_M-pyrifera_M_contig117798.3674.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117798 246..446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117798.3674.1 ID=prot_M-pyrifera_M_contig117798.3674.1|Name=mRNA_M-pyrifera_M_contig117798.3674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=48bp
SYRPDVGEVLKWAWVQVFAVAWIVWFLLSWLRRLVFVHRIVDTFTVQD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019306TMEM231