mRNA_M-pyrifera_M_contig117786.3671.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: L1IRF6_GUITC (DUF4392 domain-containing protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1IRF6_GUITC) HSP 1 Score: 112 bits (281), Expect = 2.700e-27 Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMP---DVSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAG--VAAHAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDM 453
G A DG +YTMR R M ++ L+ +F ++ S+V I VGDGGNE+G G+ + L+R+H+PLGD IAC HL+ AGVSNWGG+ALA ++ +H+ + + + E+ + A+ AAG RDGV SVD +P H E+L+ M
Sbjct: 139 GPAEDGGYYTMRGRDMSLSVPIAKLESLFA-CTSKDGKSLVTIGVGDGGNEVGMGKR--IKLVRAHVPLGDKIACTVKADHLIVAGVSNWGGWALALALMISQQSHTDPHVLSLDGEKRILQAMIAAGARDGVTSSDQLSVDGMPWETHEELLKTM 291
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A1V9YVT4_9STRA (DUF4392 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVT4_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.730e-25 Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD-VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMREQV 465
GAA DGR+YTMRAR M V+PLD F A A+S H + IA+GDGGNE+G G V ++ + G+TIA C HL+ A +S+WG YAL AG+A + DA+ T E ++ A+ AAG RDG+ G D VD LP + ++ MR V
Sbjct: 145 GAAEDGRYYTMRARDMTAIVAPLDQCF--AYAKS-HGIPTIAIGDGGNELGMGN--VSAATKAKVRNGETIAAKLGCDHLIVACISDWGAYALCAGLALRHRNSDALLTRETVVAIANAMIAAGARDGILGCQDTFVDGLPLVETLNLVHAMRHCV 295
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A7S3PK60_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PK60_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.930e-25 Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD--VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHS----------LDA-MPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMREQV 465
G A DG YTM R + + ++PL +F E ++ +GDGGNE+G G+ + L I SH+ G+ IACV PCH+L+ A VSNWGGYAL+A +A A S LD M TE+E V A +AG DG GK SVD+ +M++ R +R+ V
Sbjct: 118 GPAKDGNCYTMNGREISEKVLAPLHQLFNPVRLEKFPNIRTTGIGDGGNEVGMGKKEALLAIESHVKHGEKIACVLPCHNLVVATVSNWGGYALSAALAIVAVSEGKFEPSERILDLFMGTEQEAICVLEACISAGAWDGKTGKPGKSVDSFSFEENMKVFRQIRQIV 285
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A7S3PK84_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PK84_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.350e-24 Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD--VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHS----------LDA-MPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMREQV 465
G A DG YTM R + + ++PL +F E ++ +GDGGNE+G G+ + L I SH+ G+ IACV PCH+L+ A VSNWGGYAL+A +A A S LD M TE+E V A +AG DG GK SVD+ +M++ R +R+ V
Sbjct: 348 GPAKDGNCYTMNGREISEKVLAPLHQLFNPVRLEKFPNIRTTGIGDGGNEVGMGKKEALLAIESHVKHGEKIACVLPCHNLVVATVSNWGGYALSAALAIVAVSEGKFEPSERILDLFMGTEQEAICVLEACISAGAWDGKTGKPGKSVDSFSFEENMKVFRQIRQIV 515
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A448Z7C7_9STRA (DUF4392 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7C7_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.220e-23 Identity = 68/165 (41.21%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD---VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVA-AHAHSLDA---------MPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMR 456
G AADG YTMR +M + ++PL +F +E A+GDGGNE+G G+ I G TI CV L+ A VSNWGGYALAAG A A A + A +PTE +E + AAG RDGV GK + +VD +P +E LRD+R
Sbjct: 194 GPAADGNSYTMRGISMTERGLIAPLHRLF------TETDCPTXAIGDGGNELGMGKVFDQVANNPKISNGATIGCVVAADRLVAASVSNWGGYALAAGAALASARARGAAVGEWVDRCLPTERDERALLDRCVAAGCRDGVTGKKEATVDGMPLETSLECLRDVR 352
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A7S2UEM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEM5_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-22 Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 55 VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHSLD-----------AMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMRE 459
++P+ + + A++ H +A+GDGGNE+G G+ L I G+TI V HL+ A VSNWGGYALAAG A + D +PTE EE + A AAG RDGV+G ++ +VD +P +E LR++R+
Sbjct: 10 IAPIHTLVELAMS---HGTPFLAIGDGGNELGMGKVYAAILANPQIQKGETIGAVLAADHLVAASVSNWGGYALAAGAALVRATEDNTKTVQEWVEACLPTEAEEMALLAKCVAAGCRDGVSGLMESTVDGMPLERSLECLRNIRQ 152
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A7J2WRV8_9ARCH (DUF4392 domain-containing protein n=2 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A7J2WRV8_9ARCH) HSP 1 Score: 99.4 bits (246), Expect = 4.110e-22 Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPDVS-PLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILR 447
G A++GR++TMR + D ++ + +RA ++ + +A+GDGGNE+G G + + +P G+ IA V+ L+ A VSNWGGY L+A ++ +A+ T E+EE + + AG DGV GK + SVDN+P +VH I+R
Sbjct: 163 GMASNGRYHTMRGYDITDFHIKVEALLERA---KKNGALTVAIGDGGNEVGMGN--IREAVERDVPNGEKIAAVSRVDRLICAAVSNWGGYGLSAALSMIGGVKEALHTPEQEELMLRNILEAGAVDGVTGKREESVDNIPMKVHSSIIR 307
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: T0QVK4_SAPDV (DUF4392 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QVK4_SAPDV) HSP 1 Score: 100 bits (250), Expect = 5.560e-22 Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD-VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMR 456
GAA DG +YTMRAR M V+PLD F A A H V IA+GDGGNE+G G V ++ + G TIA C HLL A +S+WG YAL AG+AA+ + + V+ A+ AAG RDG+ D VD LP + +L +R
Sbjct: 145 GAADDGHYYTMRARDMTAIVAPLDECFAHARA---HGVPTIAIGDGGNELGMGN--VAATTKAKVRNGATIATKQDCDHLLVACISDWGAYALCAGLAAYEGDVGVLVPTHAVVAVANAMMAAGARDGILACQDTFVDGLPLVETLNLLHALR 292
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: A0A067CX16_SAPPC (DUF4392 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX16_SAPPC) HSP 1 Score: 96.7 bits (239), Expect = 1.840e-20 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD-VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAAHAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLPHRVHMEILRDMR 456
GAA DG +YTMRAR M V+PLD F A A H V IA+GDGGNE+G G V ++ + G IA C HL+ A +S+WG YAL AG+A + + V+ A+ AAG RDG+ D VD LP + +L +R
Sbjct: 146 GAADDGHYYTMRARDMTAMVAPLDECFAHARA---HGVPTIAIGDGGNELGMGN--VAATTKAKVRNGAIIATTQDCDHLIVACISDWGAYALCAGLAVRESDVAVLVDAHAVVAVANAMVAAGARDGILACQDTFVDGLPLVETLNLLHALR 293
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Match: UPI00186539E1 (D-glutamate cyclase, mitochondrial n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186539E1) HSP 1 Score: 95.1 bits (235), Expect = 8.390e-20 Identity = 61/178 (34.27%), Postives = 88/178 (49.44%), Query Frame = 1
Query: 1 GAAADGRHYTMRARAMPD-VSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIRSHIPLGDTIACVTPCHHLLFAGVSNWGGYALAAGVAA-----------------------HAHSLDAMPTEEEEEEVSAAVAAAGIRDGVNGKLDGSVDNLP-HRVHMEILRDMRE 459
G AADG +Y MR + V P+D +F A A + + +GDGGNE+G G+ V +R+H+P G IAC + AGVSNWGGYA+A + H +++PT +EEE+ A + G+R G G L VD LP H H ++++ +RE
Sbjct: 441 GRAADGNYYNMRGVNIKHLVDPIDDLFTAATAIA--GITTTGIGDGGNELGMGK--VREAVRTHMPNGSLIACDVAADFAITAGVSNWGGYAVACALCILALCPVHERYLRRGLGFPATPERHRDWANSLPTVAKEEELLAVLVKHGVRSGKTGNLAMEVDGLPFHPTHSDLIQQLRE 614 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117786.3671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117786.3671.1 >prot_M-pyrifera_M_contig117786.3671.1 ID=prot_M-pyrifera_M_contig117786.3671.1|Name=mRNA_M-pyrifera_M_contig117786.3671.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp MRARAMPDVSPLDVIFQRAVAESEHSVVAIAVGDGGNEMGCGRADVLPLIback to top mRNA from alignment at M-pyrifera_M_contig117786:83..553- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117786.3671.1 ID=mRNA_M-pyrifera_M_contig117786.3671.1|Name=mRNA_M-pyrifera_M_contig117786.3671.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig117786:83..553- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117786:83..553- >mRNA_M-pyrifera_M_contig117786.3671.1 ID=mRNA_M-pyrifera_M_contig117786.3671.1|Name=mRNA_M-pyrifera_M_contig117786.3671.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig117786:83..553- (Macrocystis pyrifera P11B4 male)back to top |