mRNA_M-pyrifera_M_contig117684.3652.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117684.3652.1
Unique NamemRNA_M-pyrifera_M_contig117684.3652.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A7R9UKX1_DIALT (Sulfhydryl oxidase (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKX1_DIALT)

HSP 1 Score: 107 bits (267), Expect = 5.120e-27
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKGHEQC 291
            LHS+AAYYPD+P +E+Q+AA + +RA  LLYPC+ C   LQ  MA +PP + SR  F  W+CE HN VN+  GK   PC  ++LD  WR   ++C
Sbjct:  104 LHSIAAYYPDSPTDEQQQAAAQFLRAFPLLYPCKDCAHDLQIAMASTPPRLGSRAEFSLWMCELHNHVNEQVGKAPVPCDLRALDEAWRTPSKEC 198
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: M2RJ03_CERS8 (Sulfhydryl oxidase n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2RJ03_CERS8)

HSP 1 Score: 102 bits (254), Expect = 1.020e-25
Identity = 48/91 (52.75%), Postives = 56/91 (61.54%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAY+PD P   ++   L L+RAL  LYPC  C   L   MA  PPDVSSR A  RWLCE HN VN+  GK  F C  +SLD RW+ G
Sbjct:   44 LHTTAAYFPDRPSPTQRANMLMLLRALPTLYPCGHCADHLGSEMATHPPDVSSRAALSRWLCERHNEVNERLGKERFDCGLRSLDERWKDG 134
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A1M2VY43_TRAPU (Sulfhydryl oxidase n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VY43_TRAPU)

HSP 1 Score: 102 bits (254), Expect = 6.880e-25
Identity = 48/91 (52.75%), Postives = 56/91 (61.54%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYPDAP    +   L L+RAL +LYPC  C   L + M   PPDVSSR A  RWLCE HN VN   GK  F C+ + LD RW+ G
Sbjct:  119 LHTTAAYYPDAPTMAHRVNMLSLLRALPVLYPCSTCATHLGEEMKTRPPDVSSRGALSRWLCEQHNAVNARLGKERFECTVEKLDERWKDG 209
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A1Y2IU89_PYCCO (Sulfhydryl oxidase n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2IU89_PYCCO)

HSP 1 Score: 102 bits (254), Expect = 7.540e-25
Identity = 48/91 (52.75%), Postives = 56/91 (61.54%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYPD P    +   L L+RAL +LYPC  C   L + M   PPDVSSR A  RWLCE HN VN+  GK  F CS + LD RW+ G
Sbjct:  123 LHTTAAYYPDKPTMAHRVNMLSLLRALPVLYPCSVCATHLGETMKTHPPDVSSRAALSRWLCEQHNEVNERLGKEKFDCSIEKLDERWKDG 213
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A7S2SM51_9STRA (Sulfhydryl oxidase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM51_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.540e-25
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYPD P E+E++AA  L+  L+ LY C+ CR          PPDVSSR AF +WLCE HN VN+   KP F CS  S+  RWR G
Sbjct:   90 LHTTAAYYPDDPSEDEKKAAEGLINGLATLYACQHCRXXXXXXXXXHPPDVSSRVAFSKWLCETHNIVNKVLDKPQFDCSDASIQRRWRTG 180
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A060S801_PYCCI (Sulfhydryl oxidase n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S801_PYCCI)

HSP 1 Score: 101 bits (252), Expect = 1.500e-24
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYPD P    +   L L+RAL +LYPC  C   L + M   PPDVSSR A  RWLCE HN VN+  GK  F CS   LD RW+ G
Sbjct:  123 LHTTAAYYPDKPTMAHRVNMLSLLRALPVLYPCSVCATHLGETMKTHPPDVSSRAALSRWLCEQHNEVNERLGKEKFDCSIDKLDERWKDG 213
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: UPI0004621A22 (FAD-dependent thiol oxidase n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004621A22)

HSP 1 Score: 101 bits (252), Expect = 1.540e-24
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYPDAP    +   L L+RAL +LYPC  C   L + M   PPDVSSR A  RWLCE HN VN   GK  F C  + LD RW+ G
Sbjct:  124 LHTTAAYYPDAPTMAHRVNMLSLLRALPVLYPCSTCATHLGEEMKTRPPDVSSRGALSRWLCEQHNAVNTRLGKERFECMVEKLDERWKDG 214
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A5C2SR18_9APHY (Sulfhydryl oxidase n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2SR18_9APHY)

HSP 1 Score: 100 bits (249), Expect = 2.850e-24
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYP+ P  + +   L L+RAL +LYPC  C   L ++M   PPDVSSR A  +WLCE HN VN+  GK  F C+ + LD RW+ G
Sbjct:  106 LHTTAAYYPEKPTMQHRVNMLSLLRALPVLYPCSTCAQHLGENMKAHPPDVSSRTALSKWLCEEHNEVNERLGKEKFECTIEKLDERWKDG 196
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A550CL02_9AGAR (Sulfhydryl oxidase n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550CL02_9AGAR)

HSP 1 Score: 98.6 bits (244), Expect = 1.420e-23
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKG 279
            LH+ AAYYP+ P   ++   L L+ AL +LYPC  C     + +  +PPDVSSR A  RWLCE HN VN+  GK  F C+ +S D RW+ G
Sbjct:  101 LHTTAAYYPERPTARQRAHMLSLIHALPVLYPCSHCAGDFDEDVKGNPPDVSSRGALSRWLCERHNAVNEKLGKTRFDCAIESTDARWKDG 191
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BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Match: A0A196SDZ5_BLAHN (Sulfhydryl oxidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SDZ5_BLAHN)

HSP 1 Score: 99.8 bits (247), Expect = 2.130e-23
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    7 LHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESPPDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKGHEQCLKS 300
            LHS+AAYYPD P EE+++ A E + + + LYPC+ CRA LQ+ M + PP V SR+ F  +LC  HN VN+   KP +PC+ + L+ RW  G  +C  S
Sbjct:  144 LHSIAAYYPDNPSEEDKKYAREFLESFAHLYPCKTCRAHLQKSMQKYPPKVDSRKDFMLYLCTLHNIVNRTLLKPVYPCNIELLEERWHTGCAECWSS 241
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117684.3652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9UKX1_DIALT5.120e-2749.47Sulfhydryl oxidase (Fragment) n=2 Tax=Diacronema l... [more]
M2RJ03_CERS81.020e-2552.75Sulfhydryl oxidase n=1 Tax=Ceriporiopsis subvermis... [more]
A0A1M2VY43_TRAPU6.880e-2552.75Sulfhydryl oxidase n=1 Tax=Trametes pubescens TaxI... [more]
A0A1Y2IU89_PYCCO7.540e-2552.75Sulfhydryl oxidase n=1 Tax=Trametes coccinea BRFM3... [more]
A0A7S2SM51_9STRA8.540e-2551.65Sulfhydryl oxidase n=1 Tax=labyrinthulid quahog pa... [more]
A0A060S801_PYCCI1.500e-2452.75Sulfhydryl oxidase n=1 Tax=Pycnoporus cinnabarinus... [more]
UPI0004621A221.540e-2452.75FAD-dependent thiol oxidase n=1 Tax=Trametes versi... [more]
A0A5C2SR18_9APHY2.850e-2449.45Sulfhydryl oxidase n=2 Tax=Lentinus tigrinus TaxID... [more]
A0A550CL02_9AGAR1.420e-2347.25Sulfhydryl oxidase n=1 Tax=Auriculariopsis ampla T... [more]
A0A196SDZ5_BLAHN2.130e-2346.94Sulfhydryl oxidase n=1 Tax=Blastocystis sp. subtyp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117684contigM-pyrifera_M_contig117684:221..541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue2.8e-22
Seed eggNOG ortholog36331.EPrPI00000014397
Preferred nameGFER
KEGG koko:K17783
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001889,GO:0001910,GO:0001911,GO:0002237,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002715,GO:0002716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009636,GO:0009719,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010556,GO:0010557,GO:0010604,GO:0010941,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0016670,GO:0016971,GO:0016972,GO:0019219,GO:0019222,GO:0031099,GO:0031100,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031342,GO:0031347,GO:0031348,GO:0032496,GO:0032501,GO:0032502,GO:0033993,GO:0034097,GO:0034612,GO:0036094,GO:0040007,GO:0042060,GO:0042221,GO:0042246,GO:0042269,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045088,GO:0045824,GO:0045935,GO:0045953,GO:0046677,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048731,GO:0048732,GO:0048856,GO:0050660,GO:0050662,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071396,GO:0071417,GO:0071495,GO:0072716,GO:0072717,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097237,GO:0097421,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903203,GO:1903204,GO:2000112,GO:2000278,GO:2000573
EggNOG free text desc.Augmenter of liver regeneration. Source PGD
EggNOG OGs1MAAK@121069,COG5054@1,KOG3355@2759
EC1.8.3.2
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Exons1
Model size321
Cds size321
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.3799286-CDS-M-pyrifera_M_contig117684:220..5411622815694.3799286-CDS-M-pyrifera_M_contig117684:220..541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117684 221..541 +
1692277525.2914057-CDS-M-pyrifera_M_contig117684:220..5411692277525.2914057-CDS-M-pyrifera_M_contig117684:220..541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117684 221..541 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117684.3652.1prot_M-pyrifera_M_contig117684.3652.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117684 221..541 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117684.3652.1

>prot_M-pyrifera_M_contig117684.3652.1 ID=prot_M-pyrifera_M_contig117684.3652.1|Name=mRNA_M-pyrifera_M_contig117684.3652.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
MQLHSVAAYYPDAPGEEEQRAALELVRALSLLYPCEACRAGLQQHMAESP
PDVSSREAFGRWLCEHHNRVNQWQGKPTFPCSQKSLDVRWRKGHEQCLKS
ETEREE*
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mRNA from alignment at M-pyrifera_M_contig117684:221..541+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117684.3652.1 ID=mRNA_M-pyrifera_M_contig117684.3652.1|Name=mRNA_M-pyrifera_M_contig117684.3652.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig117684:221..541+ (Macrocystis pyrifera P11B4 male)
ATGCAGTTGCATAGCGTGGCTGCGTATTATCCGGATGCGCCTGGGGAGGA
GGAGCAGCGAGCAGCGTTGGAATTGGTGCGTGCTTTGTCATTGCTTTACC
CTTGTGAGGCATGCAGAGCTGGGTTGCAACAGCACATGGCTGAGAGTCCT
CCTGACGTGTCTTCCAGAGAGGCGTTTGGGAGGTGGCTCTGTGAGCACCA
CAACAGAGTCAACCAGTGGCAGGGCAAACCCACCTTCCCCTGCTCTCAGA
AATCCCTCGATGTGCGGTGGAGGAAAGGACACGAGCAATGCCTCAAGAGC
GAAACGGAAAGGGAAGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117684:221..541+

>mRNA_M-pyrifera_M_contig117684.3652.1 ID=mRNA_M-pyrifera_M_contig117684.3652.1|Name=mRNA_M-pyrifera_M_contig117684.3652.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig117684:221..541+ (Macrocystis pyrifera P11B4 male)
ATGCAGTTGCATAGCGTGGCTGCGTATTATCCGGATGCGCCTGGGGAGGA
GGAGCAGCGAGCAGCGTTGGAATTGGTGCGTGCTTTGTCATTGCTTTACC
CTTGTGAGGCATGCAGAGCTGGGTTGCAACAGCACATGGCTGAGAGTCCT
CCTGACGTGTCTTCCAGAGAGGCGTTTGGGAGGTGGCTCTGTGAGCACCA
CAACAGAGTCAACCAGTGGCAGGGCAAACCCACCTTCCCCTGCTCTCAGA
AATCCCTCGATGTGCGGTGGAGGAAAGGACACGAGCAATGCCTCAAGAGC
GAAACGGAAAGGGAAGAGTGAATGCAGTTGCATAGCGTGGCTGCGTATTA
TCCGGATGCGCCTGGGGAGGAGGAGCAGCGAGCAGCGTTGGAATTGGTGC
GTGCTTTGTCATTGCTTTACCCTTGTGAGGCATGCAGAGCTGGGTTGCAA
CAGCACATGGCTGAGAGTCCTCCTGACGTGTCTTCCAGAGAGGCGTTTGG
GAGGTGGCTCTGTGAGCACCACAACAGAGTCAACCAGTGGCAGGGCAAAC
CCACCTTCCCCTGCTCTCAGAAATCCCTCGATGTGCGGTGGAGGAAAGGA
CACGAGCAATGCCTCAAGAGCGAAACGGAAAGGGAAGAGTGA
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