prot_M-pyrifera_M_contig117657.3647.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117657.3647.1
Unique Nameprot_M-pyrifera_M_contig117657.3647.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig117657.3647.1 vs. uniprot
Match: A0A517PGN0_9PLAN (Protein O-GlcNAc transferase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517PGN0_9PLAN)

HSP 1 Score: 114 bits (284), Expect = 1.810e-26
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:   24 AEDPEAEFEYQAALELAPGNLDTLKNYAVFLSAQNRNEQAIQILREAAALQRDSWEI 80
            AEDPEAEFEYQAALELAPGNLDTLKNYAVFLSAQNRNEQAIQILREAAALQRDSWEI
Sbjct:  187 AEDPEAEFEYQAALELAPGNLDTLKNYAVFLSAQNRNEQAIQILREAAALQRDSWEI 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig117657.3647.1 vs. uniprot
Match: A0A6I6ACV5_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6ACV5_9PLAN)

HSP 1 Score: 85.9 bits (211), Expect = 1.190e-16
Identity = 43/47 (91.49%), Postives = 46/47 (97.87%), Query Frame = 0 
Query:   24 AEDPEAEFEYQAALELAPGNLDTLKNYAVFLSAQNRNEQAIQILREA 70
            AEDPEAE EYQAALELAPG+LDTLKNYAVFLSA+NRNEQAI+ILREA
Sbjct:  187 AEDPEAEDEYQAALELAPGHLDTLKNYAVFLSARNRNEQAIEILREA 233
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117657.3647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A517PGN0_9PLAN1.810e-26100.00Protein O-GlcNAc transferase n=5 Tax=Gimesia TaxID... [more]
A0A6I6ACV5_9PLAN1.190e-1691.49Tetratricopeptide repeat protein n=1 Tax=Gimesia b... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 112..145
e-value: 3.6
score: 16.6
coord: 78..111
e-value: 5.8E-9
score: 45.8
coord: 11..43
e-value: 46.0
score: 9.1
coord: 44..77
e-value: 66.0
score: 7.8
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 115..145
e-value: 0.054
score: 14.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 44..77
score: 5.812
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 112..145
score: 7.788
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 78..111
score: 14.16
NoneNo IPR availablePFAMPF13374TPR_10coord: 45..75
e-value: 0.0051
score: 16.6
NoneNo IPR availablePANTHERPTHR44943FAMILY NOT NAMEDcoord: 81..146
coord: 2..111
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 79..111
e-value: 2.9E-11
score: 42.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..149
e-value: 5.4E-34
score: 119.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..147
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..145
score: 28.63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117657contigM-pyrifera_M_contig117657:49..495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117657.3647.1mRNA_M-pyrifera_M_contig117657.3647.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117657 49..495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117657.3647.1 ID=prot_M-pyrifera_M_contig117657.3647.1|Name=mRNA_M-pyrifera_M_contig117657.3647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
RQVVELAPQLHLSHFNLANTLAKAEDPEAEFEYQAALELAPGNLDTLKNY
AVFLSAQNRNEQAIQILREAAALQRDSWEILNNLGILYAEQENFEKALSC
FREALRLNPDNIEIQFHIGKALEESKQIQDAMIVYREVLGKHPNHPGAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom