mRNA_M-pyrifera_M_contig117638.3642.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117638.3642.1
Unique NamemRNA_M-pyrifera_M_contig117638.3642.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: K3W961_GLOUD (Diphthine methyl ester synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W961_GLOUD)

HSP 1 Score: 139 bits (349), Expect = 5.120e-38
Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKI 384
            S YE+I  N+  G   +H+L LLDIKVKEPDFE + R GK  YLPPRFMT+ + + QL  +EE +QEG   RD+  +G+AR+GQ  Q I+AGT+EEL T DFG PLH LV+ GD+  LEE M ++F+I
Sbjct:  145 SFYEKILYNKKGG---MHTLCLLDIKVKEPDFEAMCR-GKIVYLPPRFMTVNQAVEQLIEVEEKRQEGAYTRDSLCVGMARLGQKDQTIIAGTMEELLTADFGAPLHCLVIAGDVHPLEEEMLKQFRI 268
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A024TAC1_9STRA (Diphthine methyl ester synthase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAC1_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.400e-38
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKIDAKGP 399
            S Y++I  N+  G   LH+L LLDIKVKEPDFE +AR G+  +LPPRFMT+ + + QL  +E+ +QEGV  RDT  +G+AR+GQ  Q IVAGT+ EL TVDFG PLHSLV+ GD+  LE+ M  +F +    P
Sbjct:  145 SFYDKIAFNRKGG---LHTLCLLDIKVKEPDFEAMAR-GRTVFLPPRFMTVNQAVEQLLEVEDKRQEGVYSRDTLCVGLARLGQTDQKIVAGTMAELLTVDFGAPLHSLVIAGDVHVLEQEMLAQFSVKLLQP 273
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: T0PY96_SAPDV (Diphthine methyl ester synthase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0PY96_SAPDV)

HSP 1 Score: 137 bits (346), Expect = 1.840e-37
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKI 384
            S Y+++  N+  G   LH+L LLDIKVKEPDFE +AR G+  YLPPRFMT+ E + QL  +E+ +QE V  RDT  +G+AR+GQ +Q IVAGT++EL TVDFG PLH L + GD+  LE+ M + F +
Sbjct:  145 SFYDKVAFNRKGG---LHTLCLLDIKVKEPDFEAMAR-GRTVYLPPRFMTVNEALEQLLEIEDRRQENVYSRDTMCVGMARLGQPTQCIVAGTMQELLTVDFGGPLHCLAIAGDVHILEQEMLDHFSV 268
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A1Y1I3P3_KLENI (Diphthine methyl ester synthase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3P3_KLENI)

HSP 1 Score: 137 bits (346), Expect = 2.180e-37
Identity = 69/133 (51.88%), Postives = 97/133 (72.93%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKIDAKGP 399
            S Y++I+ N+ +G   LH+L LLDI+VKEP FE LAR GK+ Y PPR+M++   + QL  +E+ ++EGV GR+T A+GVARIG DSQ I++GTLEEL TVD+GPPLHSLV+ G++  +E+ +   F  +   P
Sbjct:  144 SFYDKIKKNRDMG---LHTLCLLDIRVKEPCFEALAR-GKKVYEPPRYMSVNTAVEQLLDIEDRRKEGVYGRETTAVGVARIGTDSQCIISGTLEELLTVDYGPPLHSLVVPGELHVMEQELLATFACNESTP 272
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A8K1CB37_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB37_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 2.950e-37
Identity = 68/131 (51.91%), Postives = 93/131 (70.99%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKIDAK 393
            S YE+I  N+  G   +H+L LLDIKVKEPDF+ +AR G+  YLPPRFMT+ + + QL  +EE +QEG   +DT  +G+AR+GQ  Q IVAGT+EEL  VDFG PLH LV+ GD+  +EE M ++F++  +
Sbjct:  145 SFYEKILYNKKGG---MHTLALLDIKVKEPDFDAMAR-GRIVYLPPRFMTVNQAVEQLIEIEEKRQEGAYSKDTLCVGMARLGQSDQKIVAGTMEELRHVDFGAPLHCLVIAGDVHLMEEEMLKQFRVSEQ 271
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A4V6WJR9_9PEZI (Diphthine methyl ester synthase n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4V6WJR9_9PEZI)

HSP 1 Score: 136 bits (343), Expect = 5.850e-37
Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGD-MEDLEEAMFERFKIDAK 393
            S Y+R+  N  +G   LH+L+LLDIKVKEPD + +AR GK  Y PPRFMT+ +C  Q+  +EE +Q+G+ G++  A+GVAR+G + +LIVAGTLEELA VD G PLHSLVLCG  M ++E      F +D K
Sbjct:  146 SFYDRVADNATLG---LHTLVLLDIKVKEPDLKAMAR-GKIIYEPPRFMTVAQCAQQMLEVEEERQQGICGKEALAVGVARLGSEDELIVAGTLEELAQVDMGRPLHSLVLCGKKMHEMEWEYVRGFAVDQK 273
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A6G0WFG2_9STRA (Diphthine methyl ester synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFG2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.170e-37
Identity = 70/128 (54.69%), Postives = 92/128 (71.88%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKI 384
            S Y++I  N+  G   LH+L LLDIKVKEPDFE +AR G+  YLPPRFMT+ + I QL  +E+ +QEGV  R T  +G+AR+GQ +Q IV+GT+EEL TVDF  PLHSLV+ G++  LEE M  +F +
Sbjct:  145 SFYDKIAFNRKGG---LHTLCLLDIKVKEPDFEAMAR-GRTVYLPPRFMTVNQAIEQLLEIEDKRQEGVYSRSTVCVGLARLGQPTQQIVSGTMEELLTVDFCAPLHSLVIAGEVHCLEEDMLRQFSV 268
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A6A6D2J6_9PEZI (Diphthine methyl ester synthase n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6D2J6_9PEZI)

HSP 1 Score: 136 bits (342), Expect = 8.650e-37
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGD-MEDLEEAMFERFKIDAKG 396
            S Y+RI  N  +G   LH+L+LLDIKVKEPD + LAR GK  Y PPRFM++ +C +Q+  +EE +Q+ V G++  AIGVAR+G D + IVAGTL+EL+  D GPPLHSLVLCG  M ++E      F ID +G
Sbjct:  146 SFYDRIAENNTLG---LHTLVLLDIKVKEPDLKALAR-GKIIYEPPRFMSVAQCASQMVEVEETRQQSVCGKEKLAIGVARLGSDGERIVAGTLQELSDADLGPPLHSLVLCGKRMHEMEWEYAREFAIDREG 274
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: A0A2P6THK5_CHLSO (Diphthine methyl ester synthase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THK5_CHLSO)

HSP 1 Score: 136 bits (342), Expect = 9.970e-37
Identity = 70/132 (53.03%), Postives = 89/132 (67.42%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKIDAKG 396
            S Y+RI +N+  G   LH+L LLDIKVKEP  E LAR GK+ Y PPRFM++   + QL  +EE +  G  G DT  +GVARIG DSQ IVAGT+++L  VDFGPPLHSLV+ GD   +E+   E+F +   G
Sbjct:  145 SFYDRIAANRRAG---LHTLCLLDIKVKEPSLESLAR-GKKVYEPPRFMSVGTALQQLLEIEETRGGGAYGPDTLCVGVARIGSDSQRIVAGTMQQLLDVDFGPPLHSLVIAGDTHHIEQEYLEQFMVGRPG 272
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BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Match: M4C0V3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0V3_HYAAE)

HSP 1 Score: 132 bits (331), Expect = 1.160e-36
Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1 
Query:    1 SIYERIQSNQMVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFALEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLVLCGDMEDLEEAMFERFKI 384
            S YE+IQ N+  G   +H+L LLDIKVKEPDFE + R G+  +LPPRFMT+ + + QL  +EE +QEG   +DT  +G+AR+GQ  Q I+AGT+EEL   DFG PLH L + G++  LEE M ++F +
Sbjct:   31 SFYEKIQYNRRGG---MHTLCLLDIKVKEPDFEAMCR-GRTVFLPPRFMTVNQALEQLLEIEEKRQEGAYTKDTMCVGMARLGQKDQTILAGTMEELFAADFGAPLHCLAITGEVHPLEEEMLKQFLV 154
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117638.3642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3W961_GLOUD5.120e-3854.69Diphthine methyl ester synthase n=1 Tax=Globispora... [more]
A0A024TAC1_9STRA7.400e-3853.38Diphthine methyl ester synthase n=3 Tax=Aphanomyce... [more]
T0PY96_SAPDV1.840e-3753.13Diphthine methyl ester synthase n=3 Tax=Saprolegni... [more]
A0A1Y1I3P3_KLENI2.180e-3751.88Diphthine methyl ester synthase n=1 Tax=Klebsormid... [more]
A0A8K1CB37_PYTOL2.950e-3751.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4V6WJR9_9PEZI5.850e-3753.03Diphthine methyl ester synthase n=1 Tax=Salinomyce... [more]
A0A6G0WFG2_9STRA6.170e-3754.69Diphthine methyl ester synthase n=1 Tax=Aphanomyce... [more]
A0A6A6D2J6_9PEZI8.650e-3753.38Diphthine methyl ester synthase n=1 Tax=Zasmidium ... [more]
A0A2P6THK5_CHLSO9.970e-3753.03Diphthine methyl ester synthase n=1 Tax=Chlorella ... [more]
M4C0V3_HYAAE1.160e-3650.78Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117638contigM-pyrifera_M_contig117638:57..476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score136.7
Seed ortholog evalue7.6e-30
Seed eggNOG ortholog157072.XP_008880785.1
Preferred nameDPH5
KEGG rclassRC00003,RC03382
KEGG koko:K00586,ko:K07870,ko:K17081
KEGG ReactionR11165
KEGG Pathwayko04137,ko04214,map04137,map04214
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004164,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0006448,GO:0006464,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009056,GO:0009058,GO:0009109,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017144,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0042737,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044273,GO:0044424,GO:0044444,GO:0044464,GO:0046500,GO:0050789,GO:0050794,GO:0050843,GO:0051171,GO:0051186,GO:0051187,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:1901575,GO:2000112,GO:2000765
EggNOG free text desc.diphthine synthase activity
EggNOG OGsCOG1798@1,KOG3123@2759
EC2.1.1.314
COG Functional cat.J
BiGG ReactioniMM904.YLR172C,iND750.YLR172C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03029,ko04031,ko04147
Exons1
Model size420
Cds size390
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815693.9888031-UTR-M-pyrifera_M_contig117638:56..861622815693.9888031-UTR-M-pyrifera_M_contig117638:56..86Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig117638 57..86 +
1692277525.120824-UTR-M-pyrifera_M_contig117638:56..861692277525.120824-UTR-M-pyrifera_M_contig117638:56..86Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig117638 57..86 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.0021422-CDS-M-pyrifera_M_contig117638:86..4761622815694.0021422-CDS-M-pyrifera_M_contig117638:86..476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117638 87..476 +
1692277525.1333778-CDS-M-pyrifera_M_contig117638:86..4761692277525.1333778-CDS-M-pyrifera_M_contig117638:86..476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117638 87..476 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117638.3642.1prot_M-pyrifera_M_contig117638.3642.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117638 87..476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117638.3642.1

>prot_M-pyrifera_M_contig117638.3642.1 ID=prot_M-pyrifera_M_contig117638.3642.1|Name=mRNA_M-pyrifera_M_contig117638.3642.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
MVGGEKLHSLLLLDIKVKEPDFEYLARTGKRRYLPPRFMTIPECIAQLFA
LEELKQEGVVGRDTKAIGVARIGQDSQLIVAGTLEELATVDFGPPLHSLV
LCGDMEDLEEAMFERFKIDAKGPWPTPYP*
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mRNA from alignment at M-pyrifera_M_contig117638:57..476+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117638.3642.1 ID=mRNA_M-pyrifera_M_contig117638.3642.1|Name=mRNA_M-pyrifera_M_contig117638.3642.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig117638:57..476+ (Macrocystis pyrifera P11B4 male)
TCGATTTATGAGCGTATTCAATCGAATCAAATGGTGGGTGGGGAGAAGTT
ACACTCTCTCTTATTGCTGGATATCAAAGTCAAGGAACCAGACTTTGAAT
ACTTGGCAAGGACAGGAAAGCGAAGATATCTCCCCCCACGCTTTATGACG
ATTCCTGAATGCATTGCTCAATTGTTTGCTTTGGAGGAATTGAAGCAAGA
AGGAGTGGTGGGAAGAGACACAAAAGCGATTGGAGTGGCTCGCATTGGAC
AAGACTCCCAGCTCATCGTCGCAGGAACCTTGGAAGAATTAGCCACAGTT
GATTTTGGACCTCCTCTCCACTCTCTTGTCCTTTGCGGGGATATGGAAGA
TTTGGAAGAAGCCATGTTTGAGCGATTCAAAATCGATGCAAAAGGACCAT
GGCCAACTCCTTACCCATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117638:57..476+

>mRNA_M-pyrifera_M_contig117638.3642.1 ID=mRNA_M-pyrifera_M_contig117638.3642.1|Name=mRNA_M-pyrifera_M_contig117638.3642.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig117638:57..476+ (Macrocystis pyrifera P11B4 male)
ATGGTGGGTGGGGAGAAGTTACACTCTCTCTTATTGCTGGATATCAAAGT
CAAGGAACCAGACTTTGAATACTTGGCAAGGACAGGAAAGCGAAGATATC
TCCCCCCACGCTTTATGACGATTCCTGAATGCATTGCTCAATTGTTTGCT
TTGGAGGAATTGAAGCAAGAAGGAGTGGTGGGAAGAGACACAAAAGCGAT
TGGAGTGGCTCGCATTGGACAAGACTCCCAGCTCATCGTCGCAGGAACCT
TGGAAGAATTAGCCACAGTTGATTTTGGACCTCCTCTCCACTCTCTTGTC
CTTTGCGGGGATATGGAAGATTTGGAAGAAGCCATGTTTGAGCGATTCAA
AATCGATGCAAAAGGACCATGGCCAACTCCTTACCCATGAATGGTGGGTG
GGGAGAAGTTACACTCTCTCTTATTGCTGGATATCAAAGTCAAGGAACCA
GACTTTGAATACTTGGCAAGGACAGGAAAGCGAAGATATCTCCCCCCACG
CTTTATGACGATTCCTGAATGCATTGCTCAATTGTTTGCTTTGGAGGAAT
TGAAGCAAGAAGGAGTGGTGGGAAGAGACACAAAAGCGATTGGAGTGGCT
CGCATTGGACAAGACTCCCAGCTCATCGTCGCAGGAACCTTGGAAGAATT
AGCCACAGTTGATTTTGGACCTCCTCTCCACTCTCTTGTCCTTTGCGGGG
ATATGGAAGATTTGGAAGAAGCCATGTTTGAGCGATTCAAAATCGATGCA
AAAGGACCATGGCCAACTCCTTACCCATGA
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