mRNA_M-pyrifera_M_contig117594.3636.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7Y2EWT7_9ACTN (MFS transporter n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y2EWT7_9ACTN) HSP 1 Score: 223 bits (569), Expect = 1.260e-68 Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQR-WTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N FAGPPL A L+ V FSLPF+VDAATF +SA ++ I P++R W ELAEGFRWLW+H+LLRPMAIILGLLN +G MS A+LVL+AQEVL+T+ TEFALL TGGAIGGVIGGW A +A +IG+GPSLW+T+LGG + IGF WW L W MF+++M+LAVLWNVITVSL
Sbjct: 140 ANMFAGPPLAAFLLAVAFSLPFWVDAATFGISAALVWWIPKPPPRPTTTPVPERRPWKTELAEGFRWLWHHDLLRPMAIILGLLNAIGMMSFAILVLFAQEVLNTTPTEFALLSTGGAIGGVIGGWTASRIAKKIGSGPSLWITMLGGGASTFAIGFMTWWPLVWAMFSIYMLLAVLWNVITVSL 324
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A351EUN5_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EUN5_9ACTN) HSP 1 Score: 218 bits (554), Expect = 5.540e-66 Identity = 119/186 (63.98%), Postives = 144/186 (77.42%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAA-PQQR-WTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+NT AGP GA L+ F+ PFFVDA TFALSA++I + +PKA AA P++R W +ELAEG RWLWNHELLRP+AI LGLLNGLGT++GA LVL+AQEVL TS TEFA+L TGGA+GG++GGW A +V+ R+G+GPSLW TL G VT+ +IG T WW L WLMF M +AVLWNVITVSL
Sbjct: 181 ANTVAGPAAGAALLAFAFAAPFFVDAVTFALSALLIFLLP---RPKAVTAARPERRPWKSELAEGCRWLWNHELLRPLAITLGLLNGLGTVAGATLVLFAQEVLLTSPTEFAILSTGGAVGGIVGGWTASAVSQRLGSGPSLWATLTVGGVTSIIIGLTSWWPLVWLMFTTSMYVAVLWNVITVSL 363
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7V9IJG9_9ACTN (MFS transporter n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IJG9_9ACTN) HSP 1 Score: 215 bits (547), Expect = 4.050e-65 Identity = 112/184 (60.87%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N F GPPLG+LL+ + F++PFFVDA TFA+SA +I ++SA P ++ AP++ W EL EGF WLW+H+LLRPMAI+LG LNGLG +S A+LVL++QEVL TSATEFA+L T GA+GGV+GGW A V+ RIG+GPSLW+T+LGGA T+ VIG W + WLMF + AVLWNVITVSL
Sbjct: 163 TNQFLGPPLGSLLLAIGFAVPFFVDAGTFAVSAALI--FAISATPPRSEPAPRRPWRVELREGFGWLWHHDLLRPMAIVLGGLNGLGAVSAAVLVLFSQEVLGTSATEFAVLSTAGAVGGVLGGWTASWVSKRIGSGPSLWVTMLGGAGTSAVIGAVSLWPIVWLMFGFYAFSAVLWNVITVSL 344
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7X5WV85_9ACTN (MFS transporter (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WV85_9ACTN) HSP 1 Score: 209 bits (531), Expect = 2.800e-63 Identity = 114/184 (61.96%), Postives = 140/184 (76.09%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N FAGPPLGA+L+ V FS+PFFVDAATFA+SA +I I+ A P A ++ W E EGF WLW+H+LLRP+AI LGLLN LG MS + VL+AQEVLDT+ATEFA+L TGGA+GGVIGGWAA +++ R+G GPSL +TLLGG + V G W L WL+ A+FM+LAVLWNVITVSL
Sbjct: 140 ANAFAGPPLGAVLVAVAFSMPFFVDAATFAVSAALITLIARPA-PAHRPVADRRPWREEAREGFDWLWHHDLLRPLAITLGLLNALGMMSYGIFVLFAQEVLDTTATEFAVLMTGGAVGGVIGGWAASAISRRLGPGPSLIVTLLGGGAVSVVTGVMNRWPLVWLLTAVFMLLAVLWNVITVSL 322
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A6C7E2B0_ILUCY (Putative major facilitator superfamily transporter n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E2B0_ILUCY) HSP 1 Score: 192 bits (489), Expect = 1.060e-55 Identity = 121/246 (49.19%), Postives = 141/246 (57.32%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQ--------------------------------------------------------------RWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+NTF GPPLGALL+V FS+PFF DAATFA+SA +IA I + + + A P W EL EGF WLW+H+LLRPMAIILGLLN LGTMS A +VL+AQEVL+T+ TEFALLETGGAIGGVIGGW A +A +IGAGPSL LTL G T V+G W L WLMFA+ M++AVLWNVITVSL
Sbjct: 188 ANTFVGPPLGALLLVAAFSVPFFFDAATFAVSAALIALIPATKRRSKSRAVPAPGAPATGTPATEHGAEGDQTPDHELAVGPRQSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWKDELREGFAWLWSHDLLRPMAIILGLLNMLGTMSVATMVLFAQEVLETTPTEFALLETGGAIGGVIGGWTASRIAKKIGAGPSLSLTLTVGGATTCVMGIANSWYLVWLMFAIAMLVAVLWNVITVSL 433
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7W1LSE4_9ACTN (MFS transporter n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LSE4_9ACTN) HSP 1 Score: 190 bits (482), Expect = 3.000e-55 Identity = 102/184 (55.43%), Postives = 136/184 (73.91%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N FAGPPL + L+VV F+LPF +DA TFA+SA +I ++ A P+ +AA ++ W ELAEGF+WLW H +LR +AI LGL N LG +SGA+ VL+AQEVL T+ TEFA+L GGAIG ++GGW+A +V +RIGAG +LW+ ++ G VT+ VIG T W L ++MFA F VLWNV+TVSL
Sbjct: 163 ANNFAGPPLASALLVVGFALPFVLDAGTFAISAALI--FAIKATPRVTEAAARRPWREELAEGFQWLWRHPVLRSLAITLGLANLLGNVSGAVFVLFAQEVLSTNTTEFAILGAGGAIGAILGGWSASAVTTRIGAGATLWVCIVCGVVTSVVIGATSSWLLVFVMFAAFSFTVVLWNVLTVSL 344
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7V9C7N5_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9C7N5_9ACTN) HSP 1 Score: 181 bits (458), Expect = 4.310e-53 Identity = 100/184 (54.35%), Postives = 129/184 (70.11%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N FAGPPLG+LLI F+LPFFVDA TFA++A ++ ++ + D + W E+ EGFRWLW H LLRPMAIILG LNGLG++ A VL+AQEVL A FAL+ TGGAIGGV+G W A ++ R+G+G SL++TL+ G +T+ +IG T W +AW+MF AVLWNVITVSL
Sbjct: 16 ANAFAGPPLGSLLIGAMFALPFFVDAGTFAVAAGLMFMMTGDFRTAREDLGTRVGWKTEIGEGFRWLWQHPLLRPMAIILGCLNGLGSVVFATFVLFAQEVLAVDAFVFALIGTGGAIGGVLGSWLAPRISRRLGSGTSLYVTLVSGVITSLIIGLTSSWVVAWVMFTAETFGAVLWNVITVSL 199
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7Y3GGV7_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3GGV7_9ACTN) HSP 1 Score: 183 bits (465), Expect = 8.560e-53 Identity = 104/183 (56.83%), Postives = 132/183 (72.13%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVS 549
+N+FAGPPLG+LLI V F+LPFFVDA TFAL+A +I + + + + + W E++EGFRWLW HE+LRPMAIILGLLNGLG M+ A VL+AQEVL A FALL T GA GGVIG +A +V+ R+G+G SL + L+G +T+ VIG WW + W+MFA +LAVLWNVITVS
Sbjct: 177 ANSFAGPPLGSLLIGVLFALPFFVDAGTFALAAGLIFLMKGNFQTTPGEG--KVAWRQEISEGFRWLWRHEVLRPMAIILGLLNGLGMMTFATFVLFAQEVLGVDAFAFALLMTAGAAGGVIGSVSASAVSKRLGSGTSLVVVLVGSVITSFVIGTAGWWPIVWIMFAASSLLAVLWNVITVS 357
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7Y1TZE1_9ACTN (MFS transporter n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1TZE1_9ACTN) HSP 1 Score: 177 bits (449), Expect = 1.730e-50 Identity = 104/187 (55.61%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASI---SVSAKPKAADAAPQQRWTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N FAGP LGALL+ V+FSLPFFVDA TFALSAV+I+ I S+ +P A+ + E+ EGFRWLW H+LLRP+AIILGLLN T+ A VLYAQEVL+TS TEFALL TG IGG+ V+ R+G GPSLW TL+ G + + ++G T W LA ++F +F + A LWNVITVSL
Sbjct: 172 ANNFAGPVLGALLLTVSFSLPFFVDAMTFALSAVLISLIPLASIRERP-ASSSTSGSSLRDEVKEGFRWLWGHDLLRPLAIILGLLNMSATIGLAAFVLYAQEVLETSPTEFALLNTGAVIGGIXXXXXXXXVSERLGPGPSLWFTLISGGIVSIILGLTSSWPLALVLFGIFRLGATLWNVITVSL 357
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Match: A0A7K1DUX6_9ACTN (MFS transporter n=2 Tax=root TaxID=1 RepID=A0A7K1DUX6_9ACTN) HSP 1 Score: 176 bits (446), Expect = 4.050e-50 Identity = 98/186 (52.69%), Postives = 131/186 (70.43%), Query Frame = 1
Query: 1 SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAAPQQR--WTAELAEGFRWLWNHELLRPMAIILGLLNGLGTMSGALLVLYAQEVLDTSATEFALLETGGAIGGVIGGWAAGSVASRIGAGPSLWLTLLGGAVTNTVIGFTRWWGLAWLMFALFMMLAVLWNVITVSL 552
+N+F GPPLG+LLI V LPFF DA +F ++ ++AS+S S +P D P+++ + AE+ EGF WLW H LLRPMAIILG LNG+GTM GA+ +LYAQEVL T+ FA+L TGGA+GG++GG A +++ +G+GPSLWL L + N +IG T W + W++ A LAVLWN ITVSL
Sbjct: 167 TNSFIGPPLGSLLIGVAIFLPFFFDAISFFIAVALVASLSGSFEPIEGDE-PREKINFKAEIKEGFAWLWAHPLLRPMAIILGCLNGIGTMVGAVFILYAQEVLHTTVFIFAILGTGGAVGGILGGIFAPKISTALGSGPSLWLALASVPIANLIIGMTTSWQVVWIVMAFETFLAVLWNTITVSL 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117594.3636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117594.3636.1 >prot_M-pyrifera_M_contig117594.3636.1 ID=prot_M-pyrifera_M_contig117594.3636.1|Name=mRNA_M-pyrifera_M_contig117594.3636.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp SNTFAGPPLGALLIVVTFSLPFFVDAATFALSAVIIASISVSAKPKAADAback to top mRNA from alignment at M-pyrifera_M_contig117594:2..553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117594.3636.1 ID=mRNA_M-pyrifera_M_contig117594.3636.1|Name=mRNA_M-pyrifera_M_contig117594.3636.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117594:2..553+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117594:2..553+ >mRNA_M-pyrifera_M_contig117594.3636.1 ID=mRNA_M-pyrifera_M_contig117594.3636.1|Name=mRNA_M-pyrifera_M_contig117594.3636.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig117594:2..553+ (Macrocystis pyrifera P11B4 male)back to top |