prot_M-pyrifera_M_contig117592.3635.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117592.3635.1
Unique Nameprot_M-pyrifera_M_contig117592.3635.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length184
Homology
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A7S4P577_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P577_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 8.600e-24
Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    1 TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLSWSKNLEDPAINGIAQGCPRLEDIDLAWCSKLTGNAVHKL 184
            T+R++  L+R+C+ LTSLD+S+C+G+ D  + QL  G   L+ L L E+    +T  A    C  L  + L+  +  +D  L QL  GCP L ++D+ +C  IT+  ++ A+     L  L ++ +  + ++   HP+L  L +S+ K L    +   A  C  L  +DLAWCSK+    V++L
Sbjct:    9 TDRSLVALARHCRKLTSLDVSWCDGVTDDGILQLRDGTRSLKHLNLGELRFRPSTVSALAARCGWLRSVILSDTS-MEDEALFQLATGCPRLTNLDVGSCQGITIMGLNRALSLLQDLRILRVQWLECINSEGLIHPKLEVLDMSFCKYLTREGLLMTAGRCVSLVHVDLAWCSKVADGEVYEL 191          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: C3XX63_BRAFL (F-box domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XX63_BRAFL)

HSP 1 Score: 61.6 bits (148), Expect = 7.460e-8
Identity = 46/174 (26.44%), Postives = 78/174 (44.83%), Query Frame = 0
Query:    1 TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGM-----ATLTTQSFAHPELRRLVLSWSKNLEDPAINGIAQGCPRLEDID 169
            T+ ++  ++ +C  L  LD+SFCEG+ D +++ +P+   ++  LF  E           LGG   L  L L  C   ++ V+ ++ + C  LR + L  C  IT   +   +    +LH L L G+     A LT    A P L  L L     ++D  ++ +      L  +D
Sbjct:  340 TDASIAAVTDSCSQLELLDISFCEGVTDYSVQNIPLSTAVMLHLFRSE----------TLGG---LTYLNLTECTAVNNGVVGRIAKCCLALRELHLCWCWDITEEGLEHIINNLSNLHHLDLTGLDKITGACLTKVPSALPHLTFLNLQQCNTVQDEVLSTLVAMVTDLTIVD 500          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A8B8DJL8_CRAVI (F-box/LRR-repeat protein 2-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DJL8_CRAVI)

HSP 1 Score: 60.1 bits (144), Expect = 2.500e-7
Identity = 52/174 (29.89%), Postives = 82/174 (47.13%), Query Frame = 0
Query:    1 TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGGCHKLEEL-KLAYCAGTD--DSVLAQLGQGC-PMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAH-----PELRRLVLSWSKNLEDPAINGIAQGCPRL 165
            T+R++  ++R C  L  L +SFCEG+ D ALR +      LR+L + +  N S   L +L  C  +  L +L +   T   D  + Q+ + C P LR++ LS C  I+ P +   V    +L  L + G+  +T   F       P+LR L L     + D  I  + +  P L
Sbjct:  303 TDRSIHYIAR-CTNLCKLQISFCEGLSDQALRYIQT-LQKLRNLKMRKGLNFSTEGLLSLFSCQSMAGLVELDFSENTQFVDDCVMQMTKCCGPRLRNLALSWCWDISDPGIISIVDHCRNLEVLDIIGLHKITGTYFIRIPEDMPKLRLLNLQQCNRIIDELIEDVIRKKPDL 474          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A162V731_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162V731_PHYB8)

HSP 1 Score: 57.8 bits (138), Expect = 1.470e-6
Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = 0
Query:   14 GLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGG-CHKLEELKLAYCAGTDDSVLAQLGQGCPM-LRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLSWSKNLEDPAINGIAQGCPRLEDIDLAWCSKLTGNAVHKL 184
            G+ +LD+S+C+ ++ A L QL    P LRS+ L+ +    +  + AL   C KLE + L  C    D+ L  L +     LRS+DLS C +IT   +         LHTL L   +         PE+    +S   N +             L  +D++ C+ L G+ + K+
Sbjct:  144 GVETLDISYCDHMNQAILMQLADALPALRSIVLDGLKCQISRGVDALSDRCDKLETISLKSCPTLSDNCLVSLAKFRKHHLRSLDLSGCRQITNKGLMLTAKYNIKLHTLLLANTS-------CSPEIVLEFVSGPLNRK------------YLRQLDISNCANLNGSQLIKV 297          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: UPI00160192BD (uncharacterized protein LOC118419265 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160192BD)

HSP 1 Score: 57.8 bits (138), Expect = 1.730e-6
Identity = 49/180 (27.22%), Postives = 80/180 (44.44%), Query Frame = 0
Query:    1 TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALA------ALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGM-----ATLTTQSFAHPELRRLVLSWSKNLEDPAINGIAQGCPRLEDID 169
            T+ ++  ++ +C  L  LD+SFCEG+ D +++ +P     LR L L+    LS   +        LGG   L  L L  C   ++ V+ ++ + C  LR + L  C  IT   +   +    +LH L L G+     A LT    A P L  L L     ++D  ++ +      L  +D
Sbjct:  629 TDASIAAVTDSCSQLELLDISFCEGVTDYSVQNIP-RLQHLRHLRLKRGFQLSTAVMLHLFRSETLGG---LTYLNLTECTAVNNGVVGRIAKCCLALRELHLCWCWDITEEGLEHIINNLSNLHHLDLTGLDKITGACLTKVPSALPHLTFLNLQQCNTVQDEVLSTLVAMVTDLTIVD 804          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A8B8QCG4_9MYRT (F-box/LRR-repeat protein 3 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8QCG4_9MYRT)

HSP 1 Score: 57.0 bits (136), Expect = 3.050e-6
Identity = 54/185 (29.19%), Postives = 77/185 (41.62%), Query Frame = 0
Query:   12 CQGLTSLDLSFCEGIDDAALRQL---PVGFPLLRSLFLEEIPNLSATALAALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLSWSKNLEDPAINGIA---------QGCPRLEDIDLAWCSKLTGNAVHKL 184
            C  L  + L +C  I D  +  L    VG   L   +L+   N    +L ++G   KLE L L  C+  DD+ L  LG GCP+LR +D+S C  I+   +   V    H + + L    +LT  S +   L      W KNL    I+G             C  L +I L  C  +T   +  L
Sbjct:  186 CGRLEKVSLKWCMEISDLGVDLLCKKSVGLKFLDLSYLKVTNN----SLRSIGSLPKLEVLALVGCSLIDDAGLQFLGDGCPLLRVIDMSRCNGISSSGLVSVVKG--HEYLVHLNASCSLTECSSS---LLHCFKDW-KNLNTIKIDGARVSDSVLKTLSNCTALVEIGLGKCIGVTNLGLMHL 360          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A3S3NG43_9MAGN (F-box/LRR-repeat protein 3-like protein isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NG43_9MAGN)

HSP 1 Score: 56.2 bits (134), Expect = 5.550e-6
Identity = 49/181 (27.07%), Postives = 85/181 (46.96%), Query Frame = 0
Query:   30 ALRQLPVGFPLLRSLFLEEIPNLSATALAALG-GCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLS-------------------------WSKNLEDPAINGIAQGCPRLEDIDLAWCSKLTGNAVHKL 184
            AL    V  P L+ + L+   +++ + L A+G GC  LEEL L+ C+G  D  L+ L      L+ +D++ C KIT  +VS  +    +L +L ++  + ++ ++F     R  +L                           S  + D  I  IAQGCP L+ I+LA+C  ++ +++  L
Sbjct:  293 ALATSLVKLPKLQVIKLDSC-HVTCSGLKAIGKGCISLEELSLSKCSGVTDEGLSFLVTKHKGLKKLDITCCTKITDISVSS-ITSCSNLTSLKMESCSLVSKEAFVLIGQRCHLLEELDLTENEIDNEGFSIDLPFVNIKIQSVGITDCGIAAIAQGCPMLQIINLAYCKDISDDSLRSL 471          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A7I1A401_DANPL (S-phase kinase-associated protein 2 isoform X1 n=3 Tax=Danaus TaxID=13036 RepID=A0A7I1A401_DANPL)

HSP 1 Score: 55.5 bits (132), Expect = 9.580e-6
Identity = 47/167 (28.14%), Postives = 77/167 (46.11%), Query Frame = 0
Query:   18 LDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLSWSKNLEDPAINGIAQGCPRLEDIDLAWCSKLTGNAVHKL 184
            LDLS C  ID   L  L      L+ L LE +  LS  +   +G       L LA   G   + L  + +GCP L S+++S                W +L   AL+ + T   Q     +L RL +S ++++ D  +  ++  CPRL ++D++ CS+L+  ++  L
Sbjct:  268 LDLSMCT-IDYRTLESLLSRCSGLKKLSLENV-KLSEYSQELIGXXXXXXTLNLAMAQGITATGLTNILEGCPGLSSLNIS----------------WCNLSEAALEVLVTRLPQ-----KLSRLNISGARSMTDENVQALSCRCPRLLELDVSDCSRLSACSLSAL 411          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: L8H8Y6_ACACA (Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8Y6_ACACA)

HSP 1 Score: 55.1 bits (131), Expect = 1.020e-5
Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 0
Query:    1 TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAAL-GGCHKLEELKLAYCAGTDDSVLAQLGQG----CPMLRSVDLSNCPKITMPAVSDAVLRWPHLHTLALKGMATL------TTQSFAHPELRRLVLSWSKNLEDPAINGI----AQGCPRLEDIDLAWCSKLTGNAVHKL 184
            T+  V  + ++C  L +L    C  I DAALR +    P LR+L L +   ++ + +  L     +L+ L ++ C       + +LG G       LR +D+S    I   A++D   R+P L  L L+  + +      T  S   P L  L LSW+ ++ D  +  +    A  CPRLE++ L  C K+T + +  L
Sbjct:   55 TSADVGAILKSCPQLQALHFEGCR-IADAALRAIIAANPPLRALNLRDCKMVTDSGMKDLFAHFAQLQYLNVSGCK------IQRLGIGEAESQDSLRLLDISRTT-IRGEALTDIAKRFPRLFHLNLEECSQVNEAWLKTCFSSPCPALTSLNLSWNSSVTDDCLESVTKLVATHCPRLENLQLEQCYKITDHCLTLL 245          
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Match: A0A7S0VYA1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYA1_9CRYP)

HSP 1 Score: 52.0 bits (123), Expect = 1.700e-5
Identity = 32/96 (33.33%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    7 VLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIPNLSATALAALGGC--HKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNC 100
            + +R    LTSLDLSF +G+ D  +  +    P L SL LE+ P ++  +L AL GC    L +L LA+C    ++ + +    C  LR+++++ C
Sbjct:   20 IAARLKTSLTSLDLSFLDGVTDDGVELIAQLCPRLSSLSLEQSPQVTDRSLGALSGCLGTTLRDLNLAFCHLVGEAAVLRTYTTCK-LRNLNVTQC 114          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117592.3635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A7S4P577_9EUKA8.600e-2432.61Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
C3XX63_BRAFL7.460e-826.44F-box domain-containing protein n=1 Tax=Branchiost... [more]
A0A8B8DJL8_CRAVI2.500e-729.89F-box/LRR-repeat protein 2-like n=1 Tax=Crassostre... [more]
A0A162V731_PHYB81.470e-628.32Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
UPI00160192BD1.730e-627.22uncharacterized protein LOC118419265 n=1 Tax=Branc... [more]
A0A8B8QCG4_9MYRT3.050e-629.19F-box/LRR-repeat protein 3 n=1 Tax=Rhodamnia argen... [more]
A0A3S3NG43_9MAGN5.550e-627.07F-box/LRR-repeat protein 3-like protein isoform X1... [more]
A0A7I1A401_DANPL9.580e-628.14S-phase kinase-associated protein 2 isoform X1 n=3... [more]
L8H8Y6_ACACA1.020e-528.14Leucine rich repeat domain containing protein n=1 ... [more]
A0A7S0VYA1_9CRYP1.700e-533.33Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 63..88
e-value: 34.0
score: 10.4
coord: 162..184
e-value: 44.0
score: 9.5
coord: 89..114
e-value: 5.1
score: 16.1
coord: 136..161
e-value: 11.0
score: 14.3
coord: 12..37
e-value: 0.078
score: 22.1
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 11..32
e-value: 0.017
score: 15.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..133
e-value: 1.2E-23
score: 85.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 134..184
e-value: 6.0E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 1..128
coord: 130..184
NoneNo IPR availablePANTHERPTHR13382:SF6SCF E3 UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1coord: 1..128
coord: 130..184
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 9..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117592contigM-pyrifera_M_contig117592:1..552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117592.3635.1mRNA_M-pyrifera_M_contig117592.3635.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117592 1..552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117592.3635.1 ID=prot_M-pyrifera_M_contig117592.3635.1|Name=mRNA_M-pyrifera_M_contig117592.3635.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp
TNRTVFVLSRNCQGLTSLDLSFCEGIDDAALRQLPVGFPLLRSLFLEEIP
NLSATALAALGGCHKLEELKLAYCAGTDDSVLAQLGQGCPMLRSVDLSNC
PKITMPAVSDAVLRWPHLHTLALKGMATLTTQSFAHPELRRLVLSWSKNL
EDPAINGIAQGCPRLEDIDLAWCSKLTGNAVHKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf