mRNA_M-pyrifera_M_contig117489.3616.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A5A8B7Z5_9PLAN (O-antigen ligase family protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A5A8B7Z5_9PLAN) HSP 1 Score: 341 bits (875), Expect = 7.750e-114 Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 1
Query: 1 PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
PQSIIGGNSAPHNA ILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTST+AFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN
Sbjct: 42 PQSIIGGNSAPHNAYILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTIAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 225
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A518A7R9_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7R9_9PLAN) HSP 1 Score: 325 bits (834), Expect = 1.080e-107 Identity = 170/184 (92.39%), Postives = 180/184 (97.83%), Query Frame = 1
Query: 1 PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
PQSIIGG+SAPHNA ILFL+VN+ LFLRPAEL+PALKGLPIYEVLILSSFFLSL+QIKRVVQFP LKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTST+AFLKTLIYYILL+SIIDSP+RLKGLLKTVAISSS+MILLCVIDYAGI+DFEFIKHVSDRDGVSDAGE IRVFRMRGTGIFQDPN
Sbjct: 38 PQSIIGGSSAPHNAYILFLMVNVTLFLRPAELIPALKGLPIYEVLILSSFFLSLEQIKRVVQFPMLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTIAFLKTLIYYILLLSIIDSPQRLKGLLKTVAISSSLMILLCVIDYAGIVDFEFIKHVSDRDGVSDAGETIRVFRMRGTGIFQDPN 221
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A6CBU1_9PLAN (O-antigen polymerase family protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6CBU1_9PLAN) HSP 1 Score: 298 bits (764), Expect = 4.320e-97 Identity = 158/184 (85.87%), Postives = 169/184 (91.85%), Query Frame = 1
Query: 1 PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
P SI+GG+SA NA LFLLVNI LFLRPAEL+PAL LPIYEVLILSSFFLSLDQIKR V+ P LKRQPITLCV GVLVAVA+SH SHMY YG+RTSTV FLKTL+YY+LLISIIDSP+RLKGLLKT+AISSSVMILLCVIDYAGI+DFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN
Sbjct: 41 PLSIMGGSSASKNAYTLFLLVNITLFLRPAELIPALANLPIYEVLILSSFFLSLDQIKRTVRLPMLKRQPITLCVFGVLVAVALSHASHMYFYGIRTSTVMFLKTLMYYLLLISIIDSPQRLKGLLKTIAISSSVMILLCVIDYAGILDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 224
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A518IDQ4_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518IDQ4_9PLAN) HSP 1 Score: 298 bits (764), Expect = 1.000e-96 Identity = 157/184 (85.33%), Postives = 168/184 (91.30%), Query Frame = 1
Query: 1 PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
P SIIGG SAP NA LFLLVNI LFLRPAELVPAL LPIYEVLI+SSFFLSLDQIKR +Q P LKRQPITLCVIGVLVAVA+SH SHMY YG+RTST+AFLKTLIYY+LL+SIIDSP+RLKGLLK VAISSS+MILLCVIDY+G+ DFEFIKHVSDRDGVSDAGE IRVFRMRGTGIFQDPN
Sbjct: 71 PTSIIGGTSAPDNAYYLFLLVNITLFLRPAELVPALANLPIYEVLIVSSFFLSLDQIKRNLQMPMLKRQPITLCVIGVLVAVALSHASHMYFYGIRTSTIAFLKTLIYYMLLVSIIDSPQRLKGLLKAVAISSSIMILLCVIDYSGLFDFEFIKHVSDRDGVSDAGETIRVFRMRGTGIFQDPN 254
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A517VWC4_9PLAN (Uncharacterized protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VWC4_9PLAN) HSP 1 Score: 278 bits (712), Expect = 5.450e-89 Identity = 142/184 (77.17%), Postives = 163/184 (88.59%), Query Frame = 1
Query: 1 PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
P SI+GG+SAP A LFL+VNI LFLRPAEL+P+L+ LPIYEVLI+SSF SLDQIKR +Q P LKRQPIT CVIG+L AVA+SH SHMY YG+ TST AFLKTLIYY+LL+SIIDSP+RLKGLLKTVAI++S+MIL CV+DY+G+ DFEFIKHVSDRDGVSDAGE +RVFRMRGTGIFQDPN
Sbjct: 64 PLSIMGGSSAPDYAYYLFLMVNITLFLRPAELIPSLENLPIYEVLIVSSFLFSLDQIKRTLQVPMLKRQPITFCVIGLLAAVALSHASHMYFYGIHTSTFAFLKTLIYYLLLVSIIDSPQRLKGLLKTVAIAASIMILFCVVDYSGVFDFEFIKHVSDRDGVSDAGEDLRVFRMRGTGIFQDPN 247
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: UPI000299F99A (O-antigen ligase family protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI000299F99A) HSP 1 Score: 172 bits (437), Expect = 1.030e-48 Identity = 94/173 (54.34%), Postives = 121/173 (69.94%), Query Frame = 1
Query: 37 NAC-ILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
N C LF L LFLRPAEL L PIYE LILS+ FLSL I+ + L+RQPITLCV VL A+ +SHL H+Y+ G F+KTLIYY LL+++++SP RL+G + VA+ ++ M++LCVID+ I+DFEFI+H+ D D V+D GEV+ V RMRGTGIFQDPN
Sbjct: 8 NLCYFLFTLTTATLFLRPAELFIWLADWPIYESLILSTLFLSLQSIQGHFSWFYLQRQPITLCVTAVLPAIIVSHLQHVYIGGAIEGATLFVKTLIYYGLLVTVVNSPSRLRGFMLVVAMCATTMVMLCVIDFFEIVDFEFIQHLDDNDSVTDEGEVVTVLRMRGTGIFQDPN 180
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A3M1V748_9BACT (O-antigen ligase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1V748_9BACT) HSP 1 Score: 172 bits (435), Expect = 2.030e-48 Identity = 89/169 (52.66%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 49 LFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDR-DGVSDAGEVIRVFRMRGTGIFQDPN 552
LFLLVN L +RPAE++ L LPIYE LIL + S I +Q+P LK+QPITLC +G+L AVA SH SH+YLYG+RTSTV F KTL+YY+L ++++D+PKR++ ++ VA+ S++ + LCV+DY +D +FIKH+ D D + GE +RV RM+GTG+F+DPN
Sbjct: 12 LFLLVNATLIIRPAEIIEELAALPIYEFLILGAVAASYRPILYHLQWPALKQQPITLCAVGMLFAVAASHASHLYLYGLRTSTVMFAKTLVYYLLFVAVVDTPKRMRAVMLVVAVVSTITVGLCVLDYMQWMDIKFIKHIKDHTDMRTYTGEELRVERMKGTGLFEDPN 180
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A3B1DK20_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DK20_9ZZZZ) HSP 1 Score: 165 bits (418), Expect = 1.150e-45 Identity = 86/173 (49.71%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 40 ACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSD--AGEVIRVFRMRGTGIFQDPN 552
A +FLLVN+ LF+RP+EL+PAL+G +YE+LIL + L++ I+ +++ L++QPI LC +G++ A+ +SH +H YL GV F K L+Y+ILL+S+I +P+RLK TVA+S+S+MI CV+DY GI DF+FI HV D+ D G+ +RV RMRGTG+FQDPN
Sbjct: 38 AYFVFLLVNLVLFIRPSELIPALQGTELYEMLILGALLLNIKNIQPQLRYRELRKQPIVLCAVGLIFAIMLSHATHFYLGGVVEGAEMFFKVLVYFILLVSLITTPQRLKWFAMTVALSASLMITFCVVDYLGIHDFKFITHVVDQADDYDEITGQRLRVVRMRGTGLFQDPN 210
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: UPI00199654EB (O-antigen ligase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI00199654EB) HSP 1 Score: 162 bits (410), Expect = 1.100e-44 Identity = 84/168 (50.00%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 49 LFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
L L V + LRPAEL P L LPIYEVLI+ + + +++R ++ NLK+QP +CVIGVL+A+ +SHL YL+GV+ ++ FLK L+ + L++S D+ R K LL +A+++++ + LCV+DY G++DFEFI H+SD DG++DA E+ RV RMRGTGIFQDPN
Sbjct: 17 LLLGVCAVMILRPAELFPVLDVLPIYEVLIVGALVCGVRELQRHFRWANLKQQPAMMCVIGVLLAIVISHLQRFYLHGVKEGSIDFLKVLLLFGLIVSQTDTVFRFKTLLTVIAVTATITVSLCVLDYYGVVDFEFITHISDVDGITDANELRRVSRMRGTGIFQDPN 184
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Match: A0A5C9CP60_9BACT (O-antigen polymerase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CP60_9BACT) HSP 1 Score: 157 bits (398), Expect = 6.490e-43 Identity = 83/171 (48.54%), Postives = 122/171 (71.35%), Query Frame = 1
Query: 40 ACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFFLSLDQIKRVVQFPNLKRQPITLCVIGVLVAVAMSHLSHMYLYGVRTSTVAFLKTLIYYILLISIIDSPKRLKGLLKTVAISSSVMILLCVIDYAGIIDFEFIKHVSDRDGVSDAGEVIRVFRMRGTGIFQDPN 552
A +L L V + LRPAEL PAL +PIYE LI+ + + +++ Q+ +L +QP +CVIGVL+A+A+SHL YL GV++ ++ FLK ++ + L++S D+ RLK LL +A+++++M+ +CVID+ G++DFEFI H+SD DGVSD+ RV RMRGTGIFQDPN
Sbjct: 15 AFLLLLSVCAVMILRPAELFPALDVIPIYESLIVGALICGVAGLRQHFQWRHLTQQPTMVCVIGVLIAIAISHLQRFYLGGVKSGSIDFLKVVLLFGLIVSQTDTVSRLKTLLAVIAVTATIMVAMCVIDFYGVVDFEFITHISDVDGVSDSNMQQRVSRMRGTGIFQDPN 185 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117489.3616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117489.3616.1 >prot_M-pyrifera_M_contig117489.3616.1 ID=prot_M-pyrifera_M_contig117489.3616.1|Name=mRNA_M-pyrifera_M_contig117489.3616.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp PQSIIGGNSAPHNACILFLLVNINLFLRPAELVPALKGLPIYEVLILSSFback to top mRNA from alignment at M-pyrifera_M_contig117489:3..554- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117489.3616.1 ID=mRNA_M-pyrifera_M_contig117489.3616.1|Name=mRNA_M-pyrifera_M_contig117489.3616.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117489:3..554- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117489:3..554- >mRNA_M-pyrifera_M_contig117489.3616.1 ID=mRNA_M-pyrifera_M_contig117489.3616.1|Name=mRNA_M-pyrifera_M_contig117489.3616.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig117489:3..554- (Macrocystis pyrifera P11B4 male)back to top |