prot_M-pyrifera_M_contig11748.3614.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11748.3614.1
Unique Nameprot_M-pyrifera_M_contig11748.3614.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length197
Homology
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 6.060e-100
Identity = 156/198 (78.79%), Postives = 172/198 (86.87%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAKPNPPKESLFETLERLA-LEPLSCKVCGDLEARASAEHPPHTPLWSVYNCGYRREQDAVWAAGLFNESPR 197
            VTDYNT+FSGIT EML GVTR LRDAQRE+L+FVDA+TYLVGHS+DSDLRAL+LVHRRLIDTSELYP+  G PFKNGLR+LS+TVLG+AIQG DAGHDS EDA+ASLELALLKM +GP F +P VWAAKPNPPKESLFE+LER     PL CKV GDLEAR SAEHPP TPLWSV+NCGYRREQDAVWAA  F  + R
Sbjct:  589 VTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSKTVLGRAIQGGDAGHDSGEDAFASLELALLKMHRGPAFELPSVWAAKPNPPKESLFESLERREPTRPLRCKVSGDLEARGSAEHPPGTPLWSVFNCGYRREQDAVWAATRFGHTDR 786          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.870e-57
Identity = 100/194 (51.55%), Postives = 132/194 (68.04%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQ-GSD-AGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAKPNPPKESLFETLERL---ALEPLSCKVCGDLEARASAEHPPHTPLWSVYNCGYRREQDAVWAA 189
            VT+++T +SGIT   L GVT  L+D Q +LL  +D+ TYLVGHS+D DLRAL+LVH R+IDT+ LYPSP G P+K GLR L + +LG+ +Q GS  +GHDS  DA A++ELALLKM KG   G+P  WA++P PP++ +F+ L R      EPL   V GD E R   ++ P + LW+ +  GYRRE DA W A
Sbjct:  138 VTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGMPYKRGLRQLCKELLGRDVQPGSGVSGHDSIMDAAAAMELALLKMAKGSTQGLPVPWASEPLPPRQPIFDALSRARSPTAEPLMISVAGDFEGRLDPQYRPESKLWTCFANGYRREADAAWLA 331          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK)

HSP 1 Score: 141 bits (355), Expect = 2.050e-39
Identity = 64/113 (56.64%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLK 113
            +TD+NT++SGIT + + G T NL++AQ +L+ F+  +TY+ GHS+DSDLRALKL+H R+IDT+ LYPSP G PFKN L+ L++  LG+ IQ S+ GHDS +DA A+L+L LLK
Sbjct:   32 ITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTKRYLGRQIQESEDGHDSAQDAVATLQLVLLK 144          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A024T9F9_9STRA (Exonuclease domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9F9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.020e-38
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELL-TFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSD-AGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAKPNPPKESLFETLERLALEPLSCKVCGDLEARASAEHPPHTPLWSVYNCGYRREQDAVWAAGLFNE 194
            + +Y+T FSGIT EML+ V   L D Q+ LL T + A+T LVGHS+DSDLRAL++VH  LIDT+ LYP P G PFK  L++L+ T L Q+IQ +D AGHDS +DA A+LEL  +K+  GP FG PP       PP+ + + TL    ++       G   AR SA+       WS+++ G     D V +  L N+
Sbjct:  505 IVNYHTAFSGITAEMLDAVDVTLADVQQSLLGTLLYANTVLVGHSIDSDLRALRIVHPHLIDTALLYPHPRGFPFKPSLKMLAATFLNQSIQSADMAGHDSCQDAVAALELFQMKVANGPTFGFPP------TPPESAAYMTL----VDKCHQSRLGVYTARPSADKESEVKPWSLFSSG--EWADLVASTHLHNQ 688          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: UPI00192201D4 (small RNA degrading nuclease 5-like isoform X3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192201D4)

HSP 1 Score: 144 bits (363), Expect = 8.810e-38
Identity = 81/174 (46.55%), Postives = 109/174 (62.64%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAKP------NPPKESLF----ETLERLALEPL-SCKVCGDLEARASA 163
            +TDYNTRFSGIT EML+GVT +L+D Q + L  V  DT LVGHS+++DL ALK+ H  ++DTS LY  P G  +K+ LR+L++  L + IQ S+ GHDS EDA A+++LA+LK+  GP FG PP +  +          K S F      ++R A EP  +  VC D EA   A
Sbjct:  246 ITDYNTRFSGITYEMLSGVTTSLQDVQEDFLKLVHKDTILVGHSLENDLLALKISHDLIVDTSVLYKHPRGGSYKSALRVLAKRFLSREIQQSETGHDSIEDARAAMDLAMLKIRNGPDFGTPPSFMRRKLLTLLGECGKTSSFVDDISIVKRYASEPSHAIPVCSDDEALLKA 419          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: UPI000D188C03 (small RNA degrading nuclease 5 isoform X3 n=1 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000D188C03)

HSP 1 Score: 143 bits (361), Expect = 2.150e-37
Identity = 72/124 (58.06%), Postives = 89/124 (71.77%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPP 124
            + DYNTRFSGIT EMLNGVT +L+D Q + L  V  +T LVGHS+++DL ALK+ H  +IDT+ LY  P G  +K  LR+LS+  L Q IQ S AGHDS EDA A++ELALLK+  GP FG PP
Sbjct:  259 IVDYNTRFSGITYEMLNGVTTSLKDIQEDFLKLVYKETILVGHSLENDLLALKISHEVVIDTALLYKHPRGGNYKTALRVLSKRFLSQEIQQSGAGHDSIEDARATMELALLKIRNGPDFGSPP 382          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A5J5WLS4_GOSBA (Exonuclease domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5J5WLS4_GOSBA)

HSP 1 Score: 142 bits (359), Expect = 3.440e-37
Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPP 124
            +TDYNTRFSGIT EML+GVT  L++ Q + LT V  DT LVGHS+++DL ALK+ H  +IDTS +Y  P G  +K+ LR+L++  L + IQ S +GHDS EDA A+++LALLK+  GP FG PP
Sbjct:  249 ITDYNTRFSGITHEMLSGVTTTLQNVQEDFLTLVHKDTILVGHSLENDLLALKISHDLIIDTSVIYEHPRGGSYKSALRVLAKRFLSREIQQSGSGHDSIEDARAAMDLALLKIRNGPDFGSPP 372          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: K7M768_SOYBN (Exonuclease domain-containing protein n=8 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7M768_SOYBN)

HSP 1 Score: 144 bits (363), Expect = 6.030e-37
Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAK 129
            +TDYNTR+SGIT EML+GVT +LRD Q E L  V  +T LVGHS+++DL ALK+ H  +IDT+ LY  P G+  KN LR L++  L + IQ S  GHDS EDA A++ELALLK+  GP FG PP +  K
Sbjct:  252 ITDYNTRYSGITSEMLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPSFTRK 380          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A834T806_9FABA (Small RNA degrading nuclease 5 isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T806_9FABA)

HSP 1 Score: 143 bits (361), Expect = 1.170e-36
Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPPVWAAK 129
            +TDYNTRFSGIT +MLNGVT NL+D Q E L  V  +T LVGHS+++DL ALK+ H  +IDT+ LY  P G+  K  LR+L++  L + IQ S  GHDS EDA A++ELALLK+  GP FG PP +  K
Sbjct:  253 ITDYNTRFSGITPDMLNGVTTNLKDIQEEFLKLVYKETILVGHSLENDLLALKISHGLVIDTAVLYKHPRGSSHKTALRILAKKFLSREIQQSGNGHDSTEDARATMELALLKIRHGPDFGSPPSFMRK 381          
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Match: A0A2K2AIQ5_POPTR (Exonuclease domain-containing protein n=10 Tax=Saliceae TaxID=238069 RepID=A0A2K2AIQ5_POPTR)

HSP 1 Score: 143 bits (361), Expect = 1.240e-36
Identity = 72/124 (58.06%), Postives = 89/124 (71.77%), Query Frame = 0
Query:    1 VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLRALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSKEDAYASLELALLKMCKGPGFGVPP 124
            + DYNTRFSGIT EMLNGVT +L+D Q + L  V  +T LVGHS+++DL ALK+ H  +IDT+ LY  P G  +K  LR+LS+  L Q IQ S AGHDS EDA A++ELALLK+  GP FG PP
Sbjct:  259 IVDYNTRFSGITYEMLNGVTTSLKDIQEDFLKLVYKETILVGHSLENDLLALKISHEVVIDTALLYKHPRGGNYKTALRVLSKRFLSQEIQQSGAGHDSIEDARATMELALLKIRNGPDFGSPP 382          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11748.3614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ11_ECTSI6.060e-10078.79Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A836CFL3_9STRA1.870e-5751.55Exonuclease domain-containing protein n=1 Tax=Trib... [more]
A0A7S3XWP5_HETAK2.050e-3956.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024T9F9_9STRA7.020e-3844.39Exonuclease domain-containing protein n=2 Tax=Apha... [more]
UPI00192201D48.810e-3846.55small RNA degrading nuclease 5-like isoform X3 n=1... [more]
UPI000D188C032.150e-3758.06small RNA degrading nuclease 5 isoform X3 n=1 Tax=... [more]
A0A5J5WLS4_GOSBA3.440e-3755.65Exonuclease domain-containing protein n=4 Tax=Goss... [more]
K7M768_SOYBN6.030e-3755.81Exonuclease domain-containing protein n=8 Tax=Glyc... [more]
A0A834T806_9FABA1.170e-3655.81Small RNA degrading nuclease 5 isoform X1 n=1 Tax=... [more]
A0A2K2AIQ5_POPTR1.240e-3658.06Exonuclease domain-containing protein n=10 Tax=Sal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 1..119
e-value: 4.6E-5
score: 32.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..117
e-value: 7.8E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 1..119
NoneNo IPR availablePANTHERPTHR12801:SF115FI18136P1coord: 1..119
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11748contigM-pyrifera_M_contig11748:283..9486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11748.3614.1mRNA_M-pyrifera_M_contig11748.3614.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11748 283..9486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11748.3614.1 ID=prot_M-pyrifera_M_contig11748.3614.1|Name=mRNA_M-pyrifera_M_contig11748.3614.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp
VTDYNTRFSGITGEMLNGVTRNLRDAQRELLTFVDADTYLVGHSVDSDLR
ALKLVHRRLIDTSELYPSPSGAPFKNGLRLLSQTVLGQAIQGSDAGHDSK
EDAYASLELALLKMCKGPGFGVPPVWAAKPNPPKESLFETLERLALEPLS
CKVCGDLEARASAEHPPHTPLWSVYNCGYRREQDAVWAAGLFNESPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf