prot_M-pyrifera_M_contig117450.3608.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117450.3608.1
Unique Nameprot_M-pyrifera_M_contig117450.3608.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
BLAST of mRNA_M-pyrifera_M_contig117450.3608.1 vs. uniprot
Match: UPI00192E19A6 (multicopper oxidase family protein n=1 Tax=Burkholderia thailandensis TaxID=57975 RepID=UPI00192E19A6)

HSP 1 Score: 53.1 bits (126), Expect = 2.590e-5
Identity = 33/87 (37.93%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   64 AATD-SDVTYKSFLANGATNKAPIFVLHDDSEDYIVLRVINACGMTNMRVDL-PFVATLTAVDGQLVEPYQSDHFWISVAQRLDILI 148
            AA D +D+ Y ++LAN  T   P  V  +     + +RVIN    T   +D       L AVDGQ V+P +  HF +S+AQR+D+L+
Sbjct:  233 AALDLNDIDYDAYLANDRTLDDPEIVPVERGSR-VRVRVINGATATAFMIDFGALTGMLVAVDGQPVQPVEGQHFPLSMAQRIDVLL 318          
BLAST of mRNA_M-pyrifera_M_contig117450.3608.1 vs. uniprot
Match: A0A7G4A632_9GAMM (Copper oxidase n=7 Tax=Legionella TaxID=445 RepID=A0A7G4A632_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 3.510e-5
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   60 PNVEAATD-SDVTYKSFLANGATNKAPIFV-LHDDSEDYIVLRVINACGMTNMRVDLPFV-ATLTAVDGQLVEPYQSDHFWISVAQRLDILI 148
            P   AA D +DV Y +FL N  T K P  V +H    D + LR I    M+N  ++   +     A+DGQ ++P QS+ F ++V QRLD+L+
Sbjct:  196 PMDNAAPDLNDVNYDAFLTNYKTLKNPQIVPVHPG--DTVRLRFIAGSAMSNFFINTGILKGEAIALDGQSIQPVQSEQFQLAVGQRLDVLV 285          
BLAST of mRNA_M-pyrifera_M_contig117450.3608.1 vs. uniprot
Match: UPI00167752DF (multicopper oxidase family protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167752DF)

HSP 1 Score: 52.4 bits (124), Expect = 4.790e-5
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   68 SDVTYKSFLANGATNKAPIFVLHDDSEDYIVLRVINACGMTNMRVDLPF-VATLTAVDGQLVEPYQSDHFWISVAQRLDILID 149
            +DV Y ++LAN  T + P  V+  ++   + +R+IN    TN  +      A L AVDG+ V P     F IS+AQRLD+L+D
Sbjct:  228 NDVDYDAYLANSRTLQDPE-VVKVEANAKVRVRIINGGASTNFHISAGGRTARLIAVDGEPVAPIDDTVFPISIAQRLDLLVD 309          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117450.3608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00192E19A62.590e-537.93multicopper oxidase family protein n=1 Tax=Burkhol... [more]
A0A7G4A632_9GAMM3.510e-538.04Copper oxidase n=7 Tax=Legionella TaxID=445 RepID=... [more]
UPI00167752DF4.790e-538.55multicopper oxidase family protein n=1 Tax=Thalass... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008972CupredoxinGENE3D2.60.40.420coord: 11..149
e-value: 1.3E-11
score: 46.8
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 67..148
IPR001117Multicopper oxidase, type 1PFAMPF00394Cu-oxidasecoord: 71..148
e-value: 4.0E-5
score: 23.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117450contigM-pyrifera_M_contig117450:51..551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117450.3608.1mRNA_M-pyrifera_M_contig117450.3608.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117450 51..551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117450.3608.1 ID=prot_M-pyrifera_M_contig117450.3608.1|Name=mRNA_M-pyrifera_M_contig117450.3608.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
YPYATEIFSGTDIVMLLEDVCPSAAEDDSGQEGDCSSWQTFLELAVSFNE
TNSEPPVECPNVEAATDSDVTYKSFLANGATNKAPIFVLHDDSEDYIVLR
VINACGMTNMRVDLPFVATLTAVDGQLVEPYQSDHFWISVAQRLDILID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR001117Cu-oxidase