mRNA_M-pyrifera_M_contig117441.3605.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig117441.3605.1
Unique NamemRNA_M-pyrifera_M_contig117441.3605.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A7S4MFL6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MFL6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.350e-9
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
            TV+L HGFG+GLG FF N+  L     V R+ +VDWMGMGGS+RP
Sbjct:   90 TVILAHGFGSGLGFFFPNVDALLDSGRVGRLLLVDWMGMGGSDRP 134
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: B8C954_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C954_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 4.310e-9
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
            TVVL HGFG+GLG F+RN+  L     + RV  +DW+GMGGS RP
Sbjct:   18 TVVLAHGFGSGLGFFYRNIDPLLHSGKISRVICLDWLGMGGSARP 62
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A7S0ATL7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATL7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.930e-9
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
            T+V+ HG+G+GLG FFRN+  L      RR+ + DW+GMGGS RP
Sbjct:   57 TLVMAHGYGSGLGFFFRNIDALLSSNQYRRIVLFDWLGMGGSHRP 101
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A4Q0A150_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A150_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 8.160e-9
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
            T+V+ HGFG GLGIFFRN   L    G RRVF +DW+GMG S RP
Sbjct:   18 TLVVAHGFGTGLGIFFRNYEHLANHSG-RRVFGIDWLGMGLSARP 61
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A7S0WPW3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WPW3_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.550e-8
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 1 
Query:    4 VVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSER 132
            +V+ HGFG+GL +F+RNL DL+   G RRVF VDW+GMG S R
Sbjct:   93 IVMTHGFGSGLAMFYRNLDDLSARSG-RRVFAVDWLGMGRSSR 134
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A0D2VS17_CAPO3 (AB hydrolase-1 domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VS17_CAPO3)

HSP 1 Score: 57.4 bits (137), Expect = 2.130e-8
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
             VVL HGFGAG+G+F+RNL  L    G+  +  +DW+GMGGS RP
Sbjct:  201 VVVLTHGFGAGVGVFYRNLPALASTPGLT-IHAIDWLGMGGSSRP 244
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A7S4RWX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RWX7_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.880e-8
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSER 132
            TVV+ HGFG+GLG FFRN+  L     + R+ +VDW+GMGGS R
Sbjct:   56 TVVMTHGFGSGLGFFFRNVDPLLQSGKIGRLILVDWIGMGGSHR 99
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A1X2G9F5_9FUNG (Alpha/beta-hydrolase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G9F5_9FUNG)

HSP 1 Score: 56.6 bits (135), Expect = 3.980e-8
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
             +V+ HG+GAGLG F++N   L  + G+ R++ +DW+GMG S RP
Sbjct:  125 NLVICHGYGAGLGFFYKNYYALANVPGLNRLYAIDWLGMGRSSRP 169
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A1Y2GQF2_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GQF2_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 1.020e-7
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
             +V+ HG+GAGLG FFRN   L+ +    +V+ +DW+GMGGS RP
Sbjct:  140 AIVVCHGYGAGLGFFFRNYLSLSQIPN-SKVYAIDWLGMGGSSRP 183
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BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Match: A0A7C8IS48_9PEZI (AB hydrolase-1 domain-containing protein n=1 Tax=Xylaria multiplex TaxID=323545 RepID=A0A7C8IS48_9PEZI)

HSP 1 Score: 55.5 bits (132), Expect = 1.020e-7
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    1 TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP 135
            T+V+LHG+GAGLG +++N   L+ L G + ++ +DW+GMG S+RP
Sbjct:  321 TLVMLHGYGAGLGFYYKNFEPLSRLTGWK-IYALDWLGMGNSKRP 364
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117441.3605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MFL6_9STRA2.350e-960.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C954_THAPS4.310e-957.78AB hydrolase-1 domain-containing protein n=1 Tax=T... [more]
A0A7S0ATL7_9STRA5.930e-953.33Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A4Q0A150_9FUNG8.160e-962.22Alpha/Beta hydrolase protein n=1 Tax=Dimargaris cr... [more]
A0A7S0WPW3_9CHLO1.550e-860.47Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A0D2VS17_CAPO32.130e-855.56AB hydrolase-1 domain-containing protein n=2 Tax=C... [more]
A0A7S4RWX7_9STRA2.880e-856.82Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1X2G9F5_9FUNG3.980e-846.67Alpha/beta-hydrolase n=1 Tax=Hesseltinella vesicul... [more]
A0A1Y2GQF2_9FUNG1.020e-751.11Alpha/Beta hydrolase protein n=1 Tax=Lobosporangiu... [more]
A0A7C8IS48_9PEZI1.020e-748.89AB hydrolase-1 domain-containing protein n=1 Tax=X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117441contigM-pyrifera_M_contig117441:420..554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score60.8
Seed ortholog evalue1.8e-07
Seed eggNOG ortholog35128.Thaps269487
Preferred nameECM18
KEGG rclassRC00037,RC00039,RC00094
KEGG koko:K13535,ko:K13699
KEGG ReactionR09038,R09381
KEGG Pathwayko00564,ko04923,map00564,map04923
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0006996,GO:0007005,GO:0007006,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016043,GO:0016298,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0019637,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032048,GO:0035965,GO:0042171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046473,GO:0046474,GO:0046486,GO:0052689,GO:0061024,GO:0071617,GO:0071704,GO:0071840,GO:0090407,GO:1901576
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGs2XFY7@2836,COG0596@1,KOG4409@2759
EC2.3.1.51
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01004
Exons1
Model size135
Cds size135
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815692.2427835-CDS-M-pyrifera_M_contig117441:419..5541622815692.2427835-CDS-M-pyrifera_M_contig117441:419..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117441 420..554 +
1692277524.2815526-CDS-M-pyrifera_M_contig117441:419..5541692277524.2815526-CDS-M-pyrifera_M_contig117441:419..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig117441 420..554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117441.3605.1prot_M-pyrifera_M_contig117441.3605.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig117441 420..554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig117441.3605.1

>prot_M-pyrifera_M_contig117441.3605.1 ID=prot_M-pyrifera_M_contig117441.3605.1|Name=mRNA_M-pyrifera_M_contig117441.3605.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
TVVLLHGFGAGLGIFFRNLRDLTGLQGVRRVFVVDWMGMGGSERP
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mRNA from alignment at M-pyrifera_M_contig117441:420..554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig117441.3605.1 ID=mRNA_M-pyrifera_M_contig117441.3605.1|Name=mRNA_M-pyrifera_M_contig117441.3605.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=135bp|location=Sequence derived from alignment at M-pyrifera_M_contig117441:420..554+ (Macrocystis pyrifera P11B4 male)
ACTGTTGTCCTCCTCCACGGATTCGGCGCAGGGCTGGGAATCTTCTTCAG
GAATCTGAGAGACCTCACAGGCCTACAGGGGGTGAGGAGAGTGTTCGTCG
TGGATTGGATGGGCATGGGAGGCAGTGAAAGGCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig117441:420..554+

>mRNA_M-pyrifera_M_contig117441.3605.1 ID=mRNA_M-pyrifera_M_contig117441.3605.1|Name=mRNA_M-pyrifera_M_contig117441.3605.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig117441:420..554+ (Macrocystis pyrifera P11B4 male)
ACTGTTGTCCTCCTCCACGGATTCGGCGCAGGGCTGGGAATCTTCTTCAG
GAATCTGAGAGACCTCACAGGCCTACAGGGGGTGAGGAGAGTGTTCGTCG
TGGATTGGATGGGCATGGGAGGCAGTGAAAGGCCCACTGTTGTCCTCCTC
CACGGATTCGGCGCAGGGCTGGGAATCTTCTTCAGGAATCTGAGAGACCT
CACAGGCCTACAGGGGGTGAGGAGAGTGTTCGTCGTGGATTGGATGGGCA
TGGGAGGCAGTGAAAGGCCC
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