mRNA_M-pyrifera_M_contig117436.3604.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A8F4J6E2_9ACTN (Pyrimidine reductase family protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J6E2_9ACTN) HSP 1 Score: 127 bits (318), Expect = 8.730e-34 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 LSIEPTHRVFSDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
L ++PT +F++ A P + TVT AP+ARR L +A+I+D G +DL AL L RG L EGGP+LNGQ LAA L+DE ++T SP+L GGDSARAAHGP+ P D+ LA LW D LF R++
Sbjct: 115 LDLDPTSAMFTEATAPPVVFTVTSAPTARRQALDGLAEIVDVGDDGVDLAAALGWLADRGVATVLCEGGPSLNGQLLAAGLVDELDLTTSPLLVGGDSARAAHGPD-GEPLDVELAHLWEADGVLFARYV 243
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A7V8X1F4_9ACTN (Dihydrofolate reductase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X1F4_9ACTN) HSP 1 Score: 112 bits (281), Expect = 6.130e-29 Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 7 IEPTHRVFSD--PDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGP-ELATPPDLRLARLWLDDDTLFGRWI 390
++P R+F+D P RP ++T A RR++LAEVA+++ G G +DL +AL AL RG + L EGGPTLNGQ + DL+DEW +++P+LAGG S R A G A P LRL RL +D TLF R++
Sbjct: 49 LDPEQRLFADAHPAIRPLVLTTAAADEERRARLAEVAEVVLVGDGLVDLPLALTALAERGAGVVLCEGGPTLNGQLVQLDLVDEWCQSVAPLLAGGRSRRVAEGDGPPAGPGALRLDRLLEEDGTLFARYV 179
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A6I3HXP8_9ACTN (Pyrimidine reductase family protein n=8 Tax=root TaxID=1 RepID=A0A6I3HXP8_9ACTN) HSP 1 Score: 113 bits (282), Expect = 4.390e-28 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 7 IEPTHRVFSDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRW 387
++PT R+F + RP ++T AP+ + L +VAD++ AG ++DL A LR + L EGGPTLN Q LA DL+DEW T+SP+L GG +AR AHGP + T L+L R+ +DDD L R+
Sbjct: 148 LDPTSRLFRNATQRPIVVTTESAPANAVAALRDVADVLIAGIDEVDLRDAFAQLRKQELTTLLCEGGPTLNNQLLADDLVDEWCQTISPILVGGTAARGAHGPAMGTANKLKLTRVVVDDDVLLLRY 274
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A2E9W1H7_9ACTN (RibD_C domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E9W1H7_9ACTN) HSP 1 Score: 109 bits (273), Expect = 7.250e-27 Identity = 60/134 (44.78%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 1 LSIEPTHRVF---SDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGD-IDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
L+++PT +F D P I T T AP + R L+ VA+++DAGTG +D+ + + L GRG + L EGGP+LN Q +AA L+DE N+T+SP+L GG + R GP LA P LRL R+ DD LF R++
Sbjct: 130 LALDPTALMFRPVGPADPPPLIYTATGAPGSARDSLSGVAEVVDAGTGSQVDVGLVVADLAGRGAGVVLAEGGPSLNHQLVAAGLVDELNLTISPLLVGGTAKRILSGPTLAAPAGLRLDRVLSDDGYLFCRYL 263
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A2E8BEP9_9ACTN (RibD_C domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BEP9_9ACTN) HSP 1 Score: 108 bits (271), Expect = 1.440e-26 Identity = 60/134 (44.78%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 1 LSIEPTHRVFS--DP-DARPSIITVTDAPSARRSQLAEVADIIDAGTGD-IDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
LS++PT +FS DP D P I T + AP LA VA++++AG GD +++++ + L RG + L+EGGP+LN Q +AA L+DE+N+T+SP+LAGG S R GP L P L+L R+ DD LF R++
Sbjct: 130 LSLDPTAMIFSPVDPADPPPLIYTASGAPGKESQALARVAEVVEAGVGDRVNINLVMADLTNRGVGVVLVEGGPSLNHQVVAAGLVDEFNLTVSPLLAGGKSKRILAGPALEMPASLKLERVLSDDGFLFCRYL 263
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A7W0KQ70_9ACTN (Pyrimidine reductase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KQ70_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.010e-25 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 25 VFSDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
+F+D P + TVTDAP RR + A+++D G +DL L L RG L+EGGP LNGQ + A L+DE N+++SP+L GGDS+R AHG A P L L+ LW DD LF R++
Sbjct: 122 LFADAAEPPLVFTVTDAPQDRRDAIVGRAEVVDMGDRLVDLPDVLGDLHERGARTVLVEGGPGLNGQLVTAGLVDELNVSVSPLLVGGDSSRLAHGVA-ARPRTLSLSHLWTADDLLFARYL 242
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: UPI001AA0C429 (pyrimidine reductase family protein n=1 Tax=Leucobacter ruminantium TaxID=1289170 RepID=UPI001AA0C429) HSP 1 Score: 105 bits (263), Expect = 1.950e-25 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 1 LSIEPTHRVFSDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
L ++P VFSD RP + TV AP+ RR+ LA VAD++DAG D++ L+ L RGH EGGP+L G F+AAD++DE +T++P L GD+ R A GPE A P +RLA + D L R++
Sbjct: 117 LDLDPESDVFSDAPVRPVVYTVAAAPAERRAALAAVADVVDAGERDVEPARVLDDLAARGHTHVHSEGGPSLFGSFIAADVVDELCLTVAPSLESGDARRIATGPE-AAPQRMRLAAVLRASDELLLRYV 245
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A355DDB1_9ACTN (Pyrimidine reductase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355DDB1_9ACTN) HSP 1 Score: 105 bits (262), Expect = 2.420e-25 Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 40 DARPSIITVTDAPSARRSQLAEVADIIDAGTGD-IDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWI 390
D P + T T A + RRS LA VA+++D G G+ +DL L L RG + L EGGP+LN Q +AA L+DE N+T+SP+LAGG +AR GP+LA P LRL R+ DD LF R++
Sbjct: 134 DQPPLVYTSTAASADRRSALARVAELVDCGDGERVDLRRVLADLHDRGAAVVLAEGGPSLNQQLVAAGLVDELNLTVSPLLAGGTAARILSGPDLAAPVRLRLDRVLADDGFLFCRYL 251
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A840NJ49_9PSEU (5-amino-6-(5-phosphoribosylamino)uracil reductase n=2 Tax=Saccharopolyspora gloriosae TaxID=455344 RepID=A0A840NJ49_9PSEU) HSP 1 Score: 105 bits (261), Expect = 3.710e-25 Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 1
Query: 4 SIEPTHRVFSDPDARPSIITVTDAPSARRSQLAEV-ADIIDAGTGDIDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRL 345
S+EP + +D P +IT DAP ARR+ LA+ AD++ AGTG +DL AL AL RG EGGP L G +AADL+DE +T+SP+LAGG + R AHGP+LA P +RL
Sbjct: 123 SLEPDSPLLTDTVVPPIVITCADAPEARRAVLADAGADVVVAGTGGVDLTAALAALGERGLLRVGCEGGPRLFGDLVAADLVDELCLTVSPLLAGGGAGRIAHGPDLAAPHPMRL 237
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Match: A0A2D6KKX1_9ACTN (RibD_C domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6KKX1_9ACTN) HSP 1 Score: 104 bits (259), Expect = 8.630e-25 Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 1 LSIEPTHRVFS--DP-DARPSIITVTDAPSARRSQLAEVADIIDAGTGD-IDLDIALEALRGRGHELALLEGGPTLNGQFLAADLIDEWNMTLSPMLAGGDSARAAHGPELATPPDLRLARLWLDDDTLFGRWIT 393
L+++PT +F DP D P I T T APS RR LA VA+++ AG GD +D+ + + L RG + L EGGP+LN Q +AA L+DE N+T+SP+L G + R GP L P LRL R+ D LF R++T
Sbjct: 130 LALDPTALMFRPVDPADPPPLIYTATGAPSDRRQALARVAEVVAAGDGDRVDVGMVMADLSARGVGVVLAEGGPSLNHQLVAAGLVDEVNLTISPLLVAGTARRILSGPALTAPAGLRLDRVLTADGFLFCRYLT 264 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117436.3604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117436.3604.1 >prot_M-pyrifera_M_contig117436.3604.1 ID=prot_M-pyrifera_M_contig117436.3604.1|Name=mRNA_M-pyrifera_M_contig117436.3604.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp LSIEPTHRVFSDPDARPSIITVTDAPSARRSQLAEVADIIDAGTGDIDLDback to top mRNA from alignment at M-pyrifera_M_contig117436:5..397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117436.3604.1 ID=mRNA_M-pyrifera_M_contig117436.3604.1|Name=mRNA_M-pyrifera_M_contig117436.3604.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig117436:5..397+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117436:5..397+ >mRNA_M-pyrifera_M_contig117436.3604.1 ID=mRNA_M-pyrifera_M_contig117436.3604.1|Name=mRNA_M-pyrifera_M_contig117436.3604.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig117436:5..397+ (Macrocystis pyrifera P11B4 male)back to top |