mRNA_M-pyrifera_M_contig117430.3601.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A6P5TEG2_PRUAV (ultraviolet-B receptor UVR8-like isoform X1 n=13 Tax=Prunus TaxID=3754 RepID=A0A6P5TEG2_PRUAV) HSP 1 Score: 80.5 bits (197), Expect = 1.400e-14 Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAIS-SPVNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASS--ATRALTVSCGPYSTAVTTDSGEVYAWGFLCGYNMVTNQHTPRLLP-RLSSDGRFVSRVACGTSHIAFL 504
++ACG H+V + +G +LT+G YGQCG +K + S VN + + +SA H+ +++ G V+ +G N +G+ G G T PLD+ S + A VSCG +A+ T+ G++++WG+ + R LP ++S+DG +ACG H L
Sbjct: 307 EIACGGRHSVVVTDAGALLTFGWGLYGQCGQGNTKDQLRPSYVNSLSNSRVKTISAGLWHTLCISVNGRVHAFGGNQFGQLGTGADEAETLPR---PLDSPSLESKHAKVVSCGARHSAILTEDGQLFSWGWNKYGQLGLGDSVDRNLPSQVSTDGCLPKNIACGWWHTLLL 475
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: L1JER8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JER8_GUITC) HSP 1 Score: 77.4 bits (189), Expect = 8.450e-14 Identity = 53/171 (30.99%), Postives = 78/171 (45.61%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSP-VNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHIA 498
VACG H+ ++GSG++L WG N YGQCG + V F A ++VS G H+ V+ G V+ WG G+ G G T + + A L V+CG T + GE+Y G+ CG ++ +P+ + L +G V +CG H A
Sbjct: 33 DVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLT---TPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEG--VQHASCGAGHTA 198
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A2H1W7B4_SPOFR (SFRICE_005579 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1W7B4_SPOFR) HSP 1 Score: 78.2 bits (191), Expect = 1.030e-13 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSL--SKSAISSPVNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHI 495
QVACGAYH++AL +G + +WG NSYGQCG +K I + I ++ NH+ A++ G V+ WG NT+G+ G + + L + ++CG T T G V+ G G+ ++ PR + L G V++VACG H+
Sbjct: 145 QVACGAYHSIALTNNGDLFSWGANSYGQCGLGTMTNKEMIPQAITSLLGVPIAMIACGSNHTFALSKSGAVFGWGKNTHGQLGLQDRENKCYPSHLKTLRN---VKVCHIACGEDFTVFLTLDGGVFTCGTGEYGQTGHGTTKDELVPRKVMELM--GSTVTQVACGRRHV 310
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A6J2JDV6_BOMMA (probable E3 ubiquitin-protein ligase HERC4 isoform X1 n=15 Tax=Bombyx TaxID=7090 RepID=A0A6J2JDV6_BOMMA) HSP 1 Score: 78.2 bits (191), Expect = 1.060e-13 Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSP--VNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHI 495
QVACGAYH+VAL SG + +WG NSYGQCG + SP ++ I ++ NH+ ++ G V+ WG NT+G+ G + VE + L + ++CG T T G V+ G G+ ++ PR + L G V+++ACG H+
Sbjct: 145 QVACGAYHSVALTNSGDLYSWGANSYGQCGLGTISNKEMSPQHISSLIGVPIALIACGNNHTFVLSKSGAVFGWGKNTHGQLGL-QDVEN--KCYPTHLKTLRNVKVCHIACGEDFTVFLTLDGGVFTCGTGEYGQTGHGTTRDELVPRKIVELM--GSTVTQIACGRRHL 310
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A2A4J1M4_HELVI (HECT domain-containing protein n=18 Tax=Noctuidae TaxID=7100 RepID=A0A2A4J1M4_HELVI) HSP 1 Score: 77.8 bits (190), Expect = 1.440e-13 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSL--SKSAISSPVNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHI 495
QVACGAYH++AL +G + +WG NSYGQCG +K I + I ++ NH+ A++ G V+ WG NT+G+ G + + L + ++CG T T G V+ G G+ ++ PR + L G V++VACG H+
Sbjct: 145 QVACGAYHSIALTNNGDLYSWGANSYGQCGLGTMTNKEMIPQAITSLLGVPIAMIACGSNHTFALSKSGAVFGWGKNTHGQLGLQDRENKCYPSHLKTLRN---VKVCHIACGEDFTVFLTLDGGVFTCGTGEYGQTGHGTTKDELVPRKVMELM--GSTVTQVACGRRHV 310
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: UPI001C35B0DC (Uncharacterized protein n=7 Tax=Manduca sexta TaxID=7130 RepID=UPI001C35B0DC) HSP 1 Score: 77.4 bits (189), Expect = 1.970e-13 Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSP--VNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHI 495
Q+ACGAYH++AL +G++ TWG NSYGQCG + +P + I +++ NH+ A++ G V+ WG N++G+ G + + L + + ++CG T T G V+ G G+ ++ PR + L G V++VACG H+
Sbjct: 147 QIACGAYHSIALTNNGELYTWGANSYGQCGLGNMSNKEMTPQQITSLVGVPIALIASGSNHTFALSKSGAVFGWGKNSHGQLGLQDRENKCY---PTHLKSLRNVKVCHIACGEDFTVFLTLDGGVFTCGTGEYGQTGHGTTRDELVPRKIVELM--GSTVTQVACGRRHV 312
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: UPI001F0499E7 (ultraviolet-B receptor UVR8-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0499E7) HSP 1 Score: 76.3 bits (186), Expect = 4.620e-13 Identity = 53/174 (30.46%), Postives = 80/174 (45.98%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCG----YSLSKSA-ISSPVNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGFLCGYNMVTNQHTPRLLPRL---SSDGRFVSRVACGTSHIA 498
++ CG YH+ A+ G I WG N +GQ G +++ K + N + ++ + VS H+A VT RG VYC+G N + G + T + SS + TVSCG TA T G+++ WG+ + PR P +G+ V V+CG H A
Sbjct: 415 KMDCGDYHSAAISDGGNIWLWGENRFGQLGTEDFFTVGKPFNLQLHENDNSNDFLTDVSCGSRHTAIVTFRGAVYCFGDNALSQLGRKNATDVTSYNKPEKVKFSSKVKIKTVSCGVSHTAALTAKGDIFTWGYGYAGMLGHGDVLPRAQPTQIFECFEGKRVLTVSCGAYHTA 588
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A200QYL0_9MAGN (Regulator of chromosome condensation n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QYL0_9MAGN) HSP 1 Score: 74.7 bits (182), Expect = 1.470e-12 Identity = 58/172 (33.72%), Postives = 84/172 (48.84%), Query Frame = 1
Query: 1 QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSP-VNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAG-EGVEATWRISKVPLDASSATR--ALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSH 492
+ACG H+ A+ +G +LT+G YGQCG + +S V+ I VSA H+ ++ G VY +G N +G+ G G + E R+ LDA S A VSCG +A+ TD G+V+ WG+ G V +++ P +P DG VACG H
Sbjct: 316 SIACGGRHSAAITDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIQGVSAGLWHTICISTEGDVYAFGGNQFGQLGTGADTAETLPRL----LDAPSIENEHAKLVSCGARHSAIITDDGKVFCWGWNKYGQLGLGDVIDRNIPSQVP---FDGCIPKNVACGWWH 480
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: UPI001565E3B3 (chromosome condensation regulator RCC1 n=1 Tax=Curtobacterium sp. VKM Ac-2852 TaxID=2739024 RepID=UPI001565E3B3) HSP 1 Score: 73.6 bits (179), Expect = 3.240e-12 Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 7 ACGAYHNVALLGSGKILTWGLNSYGQCGY-SLSKSAISSPVNHSFSEAIVAVSANGNHSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRAL---TVSCGPYSTAVTTDSGEVYAWGFLCGYNMV--TNQHTPRLLPRLSSDGRFVSRVACGTSHIAFL 504
A GAYH++ALL G +++WG N++GQ G ++S A +PV + AV+A HS A+T G ++ WG N G+ G G T SK+P + + + V+ +S A+ TD G V+ WG C + T Q T R + L+ R V+ ++ G +H L
Sbjct: 49 AAGAYHSIALLRDGSLVSWGQNTFGQLGDGTVSNRATPTPVAMPSDVHVAAVAAGRTHSLALTTTGAIWAWGDNRSGQLGNG-----TRTPSKIPEPVTMPSNHVFTQIVAGDNFSEALATD-GTVWGWGDNCFGQLGNGTTQTTLRPVEALTPPNRIVTSLSAGATHSLML 214
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Match: A0A2G5EXI9_AQUCA (Uncharacterized protein n=4 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EXI9_AQUCA) HSP 1 Score: 73.6 bits (179), Expect = 3.720e-12 Identity = 55/172 (31.98%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 4 VACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSPVNHSFSEAIVAVSANGN-HSAAVTLRGHVYCWGSNTYGESGAGEGVEATWRISKVPLDASSATRALTVSCGPYSTAVTTDSGEVYAWGF----LCGYNMVTNQHTPRLLPRLSSDGRFVSRVACGTSHIAFL 504
+ACG H+ + +G +LT+G YGQCG + +S S + A G H+ ++ G VY +G N +G+ G G T L+ A VSCG TAV TD G V+ WG+ G V +++ P +P DGR VACG H L
Sbjct: 326 IACGGRHSAVVTDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEKVATGLWHTVCISTEGDVYAFGGNQFGQLGTGADQAETLPRVLEALNMEDK-NAKVVSCGARHTAVITDDGNVFCWGWNKYGQLGLGDVIDRNVPSQVPM---DGRLPKNVACGWWHTLVL 493 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117430.3601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117430.3601.1 >prot_M-pyrifera_M_contig117430.3601.1 ID=prot_M-pyrifera_M_contig117430.3601.1|Name=mRNA_M-pyrifera_M_contig117430.3601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp QVACGAYHNVALLGSGKILTWGLNSYGQCGYSLSKSAISSPVNHSFSEAIback to top mRNA from alignment at M-pyrifera_M_contig117430:21..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117430.3601.1 ID=mRNA_M-pyrifera_M_contig117430.3601.1|Name=mRNA_M-pyrifera_M_contig117430.3601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig117430:21..527- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117430:21..527- >mRNA_M-pyrifera_M_contig117430.3601.1 ID=mRNA_M-pyrifera_M_contig117430.3601.1|Name=mRNA_M-pyrifera_M_contig117430.3601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig117430:21..527- (Macrocystis pyrifera P11B4 male)back to top |