mRNA_M-pyrifera_M_contig100187.36.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100187.36.1
Unique NamemRNA_M-pyrifera_M_contig100187.36.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A7S2H2M8_9STRA (Aminomethyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2M8_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.560e-61
Identity = 99/171 (57.89%), Postives = 129/171 (75.44%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFED-GVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            T    LH SLG +MVPFAGY +P+Q+   GV   HLHTRAE C+S+FDVSHMGQ+R  G D+ AF+E+++  D+E L PG   LSL+M+E G I+DDTVI+N GD ++MVVNGA KH+D+A+  K+M E  MDVQME+LED+ L+ALQGPGA  AL  L+P++D + MPFM
Sbjct:   32 TAFYDLHLSLGGKMVPFAGYELPVQYTGHGVKKEHLHTRAENCASLFDVSHMGQIRWHGKDKVAFIEKMVCGDIEVLNPGEGKLSLIMNESGGIVDDTVISNAGDYIYMVVNGACKHKDMAHFEKYMSEYGMDVQMEYLEDQQLLALQGPGAAAALGRLAPSLDFSTMPFM 202          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A6A3NEP9_9STRA (Aminomethyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NEP9_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.980e-53
Identity = 88/170 (51.76%), Postives = 123/170 (72.35%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL  LH +LG +MVPFAGY+MP+Q++ GVL SHLHTR   C+S+FDVSHMGQLR++G DR  FLE V+V D++ L  G + LSL+ S++G ILDD VI+   D V++VVN   +  D+A++R+ +E  + D ++E ++DRAL+ALQGPGA   +  L P +DL  + FM
Sbjct:   24 TPLYDLHVALGGKMVPFAGYAMPVQYQAGVLQSHLHTREPNCASLFDVSHMGQLRVTGADRLRFLESVVVGDLQALGSGEAKLSLITSDQGGILDDCVISRYDDHVYVVVNAGNQDADVAHMRQLLERFQGDARLERIDDRALVALQGPGAAAVVEALEPNVDLQDLEFM 193          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A1Z5JTI5_FISSO (Aminomethyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTI5_FISSO)

HSP 1 Score: 179 bits (454), Expect = 1.070e-51
Identity = 93/173 (53.76%), Postives = 127/173 (73.41%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFE-DGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRA-LIALQGPGAMGALAELSP-TIDLARMPFM 531
            T L  LH  LG  MVPFAGY +P+ ++ DGV+  HL  R+EG +S+FDVSHMGQ+R  G DR AFLER++V D+  LA G+  LSL+ +E+G I+DDTVITN GD ++MVVNGA K  D+ + ++ M+E   DV ME+LED   L+A+QGPGA  A++++ P T+DL++MPFM
Sbjct:   31 TALNELHKELGGDMVPFAGYELPVLYKGDGVMKEHLWCRSEGKASLFDVSHMGQIRWHGKDRVAFLERIVVGDIAGLASGSGCLSLVTNEKGGIIDDTVITNAGDYIYMVVNGATKFGDMEHFQQQMKEFGGDVTMEYLEDSMQLLAIQGPGAAAAVSKVLPSTVDLSKMPFM 203          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A5D6YG56_9STRA (Aminomethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG56_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.890e-51
Identity = 89/170 (52.35%), Postives = 120/170 (70.59%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL   H + G +MV FAGY+MP+Q+  GVL SH HTRA GC+S+FDVSHMGQLR+ G DR  FLE ++V D++ LA G + LSLL + RG I+DD VI+   D  ++VVN   +  D+A++ + +E  + DV +E L DRAL+ALQGPGA   +AEL+P +DLA + FM
Sbjct:   31 TPLYDFHVAEGGKMVDFAGYAMPVQYPAGVLKSHNHTRAAGCASLFDVSHMGQLRVRGADRERFLESIVVGDLQALALGEAKLSLLTNARGGIIDDCVISKYDDHFYVVVNAGNQDVDLAHMHRVLESFQGDVAIERLSDRALVALQGPGAAAVMAELAPGVDLAGLGFM 200          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: M4BJ41_HYAAE (Aminomethyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ41_HYAAE)

HSP 1 Score: 177 bits (448), Expect = 7.270e-51
Identity = 89/170 (52.35%), Postives = 120/170 (70.59%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL  LH SLG +MVPFAGY+MP+Q++ GVL SHLHTR +G +S+FDVSHMGQLR++G DR AFLE V+V D+  L+ G + LSLL ++RG I+DD VI+   D V++VVN   +  D+ +L  H+E  K D  +E L+D +L+ALQGPGA   +  L P + L  + FM
Sbjct:   27 TPLYDLHVSLGGKMVPFAGYAMPVQYKAGVLQSHLHTREQGHASLFDVSHMGQLRITGSDRLAFLESVVVGDLLALSSGEAKLSLLTNDRGGIIDDCVISRYDDHVYVVVNAGNRDVDLVHLYHHLESFKGDAAIECLDDHSLVALQGPGAADVVEMLKPNVKLQDLGFM 196          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A8J9TFJ6_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFJ6_PHATR)

HSP 1 Score: 170 bits (431), Expect = 3.280e-50
Identity = 95/181 (52.49%), Postives = 124/181 (68.51%), Query Frame = 1
Query:    7 SEGLA-TPLQHLHHSLGAQMVPFAGYSMPLQFED---GVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRA-LIALQGPGAMGALAELSPT-IDLARMPFM 531
            SE L  T L ++H  LG  MVPFAGY +P+ ++    GV+  HL  RA+G +S+FDVSHMGQ+R  G DR AFLERV+V D+ +L  G   LSL+ +E+G I+DDTVITN GD VFMVVNGA K  D+ +  + M     DV ME+LED   L+A+QGPGA  ++A+L P+  D+ RMPFM
Sbjct:   36 SENLVKTALYNVHKDLGGDMVPFAGYELPVLYKGENGGVMKEHLWCRADGKASLFDVSHMGQIRWHGKDRVAFLERVVVGDIASLKEGMGCLSLVTNEKGGIIDDTVITNAGDHVFMVVNGATKFGDMKHFEEQMAVFDGDVTMEYLEDSMQLLAVQGPGAAASVAKLLPSDFDMTRMPFM 216          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A329S0R3_9STRA (Aminomethyltransferase n=18 Tax=Peronosporaceae TaxID=4777 RepID=A0A329S0R3_9STRA)

HSP 1 Score: 174 bits (442), Expect = 4.730e-50
Identity = 84/170 (49.41%), Postives = 122/170 (71.76%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL  LH SLG +MVPFAGYSMP+Q++ GVL SHLHTR +  +S+FDVSHMGQLR++G DR  FLE V+V D++ L  G + LSL+ +++G I+DD V++   D +++VVN   +  D+ ++ K +E  K D  +E ++DRAL+ALQGPGA+  +  L+P ++L  + FM
Sbjct:   19 TPLYDLHVSLGGKMVPFAGYSMPVQYKAGVLQSHLHTREQDKASLFDVSHMGQLRITGKDRLQFLESVVVGDLQALGSGEAKLSLITNDQGGIIDDCVVSRYDDHLYVVVNAGNQDVDLVHMHKLLEGFKGDAAIERIQDRALVALQGPGAVNVVETLTPNVNLKDLEFM 188          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: D0NQF6_PHYIT (Aminomethyltransferase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQF6_PHYIT)

HSP 1 Score: 173 bits (439), Expect = 1.860e-49
Identity = 84/170 (49.41%), Postives = 121/170 (71.18%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL  LH SLG +MVPFAGYSMP+Q++ GVL SHLHTR +  +S+FDVSHMGQLR++G DR  FLE V+V D++ L  G + LSL+ +++G I+DD V++   D +++VVN   +  D+ ++ K  E  K D  +E ++DRAL+ALQGPGA+  +  L+P ++L  + FM
Sbjct:   19 TPLYDLHVSLGGKMVPFAGYSMPVQYQAGVLQSHLHTREQEKASLFDVSHMGQLRITGKDRLQFLESVVVGDLQALGSGEAKLSLITNDQGGIIDDCVVSRYDDHLYVVVNAGNQDVDLVHMHKLSEGFKGDASIERIQDRALVALQGPGAVDVVETLNPNVNLKDLEFM 188          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: K3WFC7_GLOUD (Aminomethyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFC7_GLOUD)

HSP 1 Score: 173 bits (438), Expect = 2.190e-49
Identity = 84/170 (49.41%), Postives = 121/170 (71.18%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALAELSPTIDLARMPFM 531
            TPL   H ++G +MV FAGY+MP+Q+  GVL SH HTR  G +S+FDVSHMGQLR++G DR  FLE ++V D++ LA G + LSL+ +++G I+DDTVIT   D +++VVN   +  D+ ++ K +E  K DV++E L DRAL+ALQGPGA   ++ L+P++D   + FM
Sbjct:   27 TPLYDFHVAVGGKMVDFAGYAMPVQYPAGVLKSHNHTRTPGNASLFDVSHMGQLRITGADRVRFLESIVVGDIDALAHGEAKLSLITNDQGGIIDDTVITKYDDHLYVVVNAGNQEIDLVHMHKVLESFKGDVKIERLTDRALVALQGPGAAEIMSALAPSVDFKELAFM 196          
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Match: A0A024GNN4_9STRA (Aminomethyltransferase n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024GNN4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.940e-49
Identity = 87/171 (50.88%), Postives = 119/171 (69.59%), Query Frame = 1
Query:   22 TPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCSSMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTILDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRALIALQGPGAMGALA-ELSPTIDLARMPFM 531
            TPL  LH  LG +MV FAGY MP+Q++DG++ SHLHTR  G SS+FDVSHMGQLR++G DR AFLE ++VAD+   A G + LSLL ++ G I+DD VIT   D  ++VVN   K  D+ ++ + +E+ K D  +E L+DRAL+ALQGPGA+  L  E+  ++D   + FM
Sbjct:    7 TPLYDLHVELGGKMVSFAGYQMPIQYKDGIVKSHLHTRMAGKSSLFDVSHMGQLRIAGNDREAFLESLVVADLAASATGEAKLSLLTNKDGGIIDDCVITKYEDHFYVVVNAGNKENDLLHMHRELEQFKGDATIEILDDRALVALQGPGAVNTLRNEMFASVDFQDLEFM 177          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100187.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2H2M8_9STRA1.560e-6157.89Aminomethyltransferase n=1 Tax=Dictyocha speculum ... [more]
A0A6A3NEP9_9STRA1.980e-5351.76Aminomethyltransferase n=4 Tax=Phytophthora TaxID=... [more]
A0A1Z5JTI5_FISSO1.070e-5153.76Aminomethyltransferase n=2 Tax=Fistulifera solaris... [more]
A0A5D6YG56_9STRA1.890e-5152.35Aminomethyltransferase n=1 Tax=Pythium brassicum T... [more]
M4BJ41_HYAAE7.270e-5152.35Aminomethyltransferase n=1 Tax=Hyaloperonospora ar... [more]
A0A8J9TFJ6_PHATR3.280e-5052.49Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A329S0R3_9STRA4.730e-5049.41Aminomethyltransferase n=18 Tax=Peronosporaceae Ta... [more]
D0NQF6_PHYIT1.860e-4949.41Aminomethyltransferase n=2 Tax=Phytophthora infest... [more]
K3WFC7_GLOUD2.190e-4949.41Aminomethyltransferase n=1 Tax=Globisporangium ult... [more]
A0A024GNN4_9STRA2.940e-4950.88Aminomethyltransferase n=3 Tax=Albugo candida TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100187contigM-pyrifera_M_contig100187:150..680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.0
Seed ortholog evalue1.3e-43
Seed eggNOG ortholog42099.EPrPV00000019923
Preferred nameAMT
KEGG rclassRC00022,RC00069,RC00183,RC00360,RC02834
KEGG koko:K00605,ko:K05359
KEGG ReactionR00691,R01221,R01373,R02300,R04125
KEGG Pathwayko00260,ko00400,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00400,map00630,map00670,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00024,M00532
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005488,GO:0005504,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0005840,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006730,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008289,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0019866,GO:0022626,GO:0031090,GO:0031405,GO:0031406,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031981,GO:0031984,GO:0032259,GO:0032991,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046395,GO:0046686,GO:0048037,GO:0048046,GO:0050662,GO:0050896,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681,GO:1902494,GO:1990204,GO:1990904
EggNOG free text desc.Aminomethyltransferase. Source PGD
EggNOG OGs1MEAB@121069,COG0404@1,KOG2770@2759
EC2.1.2.10,4.2.1.51,4.2.1.91
COG Functional cat.E
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size531
Cds size531
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815496.594967-CDS-M-pyrifera_M_contig100187:149..6801622815496.594967-CDS-M-pyrifera_M_contig100187:149..680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100187 150..680 +
1692277438.3059535-CDS-M-pyrifera_M_contig100187:149..6801692277438.3059535-CDS-M-pyrifera_M_contig100187:149..680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100187 150..680 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100187.36.1prot_M-pyrifera_M_contig100187.36.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100187 150..680 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100187.36.1

>prot_M-pyrifera_M_contig100187.36.1 ID=prot_M-pyrifera_M_contig100187.36.1|Name=mRNA_M-pyrifera_M_contig100187.36.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MASEGLATPLQHLHHSLGAQMVPFAGYSMPLQFEDGVLASHLHTRAEGCS
SMFDVSHMGQLRLSGPDRNAFLERVLVADMETLAPGTSGLSLLMSERGTI
LDDTVITNEGDSVFMVVNGAVKHEDIAYLRKHMEESKMDVQMEHLEDRAL
IALQGPGAMGALAELSPTIDLARMPFM
back to top

mRNA from alignment at M-pyrifera_M_contig100187:150..680+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100187.36.1 ID=mRNA_M-pyrifera_M_contig100187.36.1|Name=mRNA_M-pyrifera_M_contig100187.36.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig100187:150..680+ (Macrocystis pyrifera P11B4 male)
ATGGCCAGCGAAGGGCTGGCCACGCCGCTCCAGCATCTGCACCACTCGCT TGGCGCCCAGATGGTGCCGTTCGCCGGCTACTCGATGCCGCTTCAGTTCG AGGATGGTGTGCTGGCGTCTCACCTGCACACGCGCGCGGAGGGCTGCTCT TCCATGTTCGATGTGTCGCACATGGGTCAGCTGCGACTGAGTGGGCCGGA TCGCAACGCGTTTCTGGAGCGCGTGCTCGTCGCTGACATGGAAACGCTGG CGCCTGGCACCAGCGGCCTCAGCTTGCTCATGAGTGAGCGCGGCACCATC CTGGACGACACCGTCATCACCAACGAGGGTGACTCTGTGTTCATGGTGGT GAACGGCGCCGTGAAGCACGAGGATATTGCGTACCTGCGCAAGCACATGG AGGAGAGCAAGATGGACGTGCAGATGGAGCACCTGGAGGACCGCGCGCTG ATCGCGCTGCAGGGACCGGGCGCCATGGGCGCGCTGGCGGAGCTGTCGCC GACCATCGACCTGGCACGCATGCCGTTCATG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100187:150..680+

>mRNA_M-pyrifera_M_contig100187.36.1 ID=mRNA_M-pyrifera_M_contig100187.36.1|Name=mRNA_M-pyrifera_M_contig100187.36.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig100187:150..680+ (Macrocystis pyrifera P11B4 male)
ATGGCCAGCGAAGGGCTGGCCACGCCGCTCCAGCATCTGCACCACTCGCT
TGGCGCCCAGATGGTGCCGTTCGCCGGCTACTCGATGCCGCTTCAGTTCG
AGGATGGTGTGCTGGCGTCTCACCTGCACACGCGCGCGGAGGGCTGCTCT
TCCATGTTCGATGTGTCGCACATGGGTCAGCTGCGACTGAGTGGGCCGGA
TCGCAACGCGTTTCTGGAGCGCGTGCTCGTCGCTGACATGGAAACGCTGG
CGCCTGGCACCAGCGGCCTCAGCTTGCTCATGAGTGAGCGCGGCACCATC
CTGGACGACACCGTCATCACCAACGAGGGTGACTCTGTGTTCATGGTGGT
GAACGGCGCCGTGAAGCACGAGGATATTGCGTACCTGCGCAAGCACATGG
AGGAGAGCAAGATGGACGTGCAGATGGAGCACCTGGAGGACCGCGCGCTG
ATCGCGCTGCAGGGACCGGGCGCCATGGGCGCGCTGGCGGAGCTGTCGCC
GACCATCGACCTGGCACGCATGCCGTTCATGATGGCCAGCGAAGGGCTGG
CCACGCCGCTCCAGCATCTGCACCACTCGCTTGGCGCCCAGATGGTGCCG
TTCGCCGGCTACTCGATGCCGCTTCAGTTCGAGGATGGTGTGCTGGCGTC
TCACCTGCACACGCGCGCGGAGGGCTGCTCTTCCATGTTCGATGTGTCGC
ACATGGGTCAGCTGCGACTGAGTGGGCCGGATCGCAACGCGTTTCTGGAG
CGCGTGCTCGTCGCTGACATGGAAACGCTGGCGCCTGGCACCAGCGGCCT
CAGCTTGCTCATGAGTGAGCGCGGCACCATCCTGGACGACACCGTCATCA
CCAACGAGGGTGACTCTGTGTTCATGGTGGTGAACGGCGCCGTGAAGCAC
GAGGATATTGCGTACCTGCGCAAGCACATGGAGGAGAGCAAGATGGACGT
GCAGATGGAGCACCTGGAGGACCGCGCGCTGATCGCGCTGCAGGGACCGG
GCGCCATGGGCGCGCTGGCGGAGCTGTCGCCGACCATCGACCTGGCACGC
ATGCCGTTCATG
back to top