mRNA_M-pyrifera_M_contig117424.3598.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A356VL66_9GAMM (Porin (Fragment) n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A356VL66_9GAMM) HSP 1 Score: 368 bits (944), Expect = 1.330e-125 Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
ISNSWNPRLRHAYINWDMGA RSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDEL ATGVNRRLDNAET+PDMIARYNGSQGDLNWTFAAMGRQLGYESR SSGEKLASDETWGYGLSIAGKWQL +GDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD
Sbjct: 162 ISNSWNPRLRHAYINWDMGAGRSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELSATGVNRRLDNAETLPDMIARYNGSQGDLNWTFAAMGRQLGYESRFSSGEKLASDETWGYGLSIAGKWQLDNGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 345
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A2E7C542_9GAMM (Porin n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C542_9GAMM) HSP 1 Score: 350 bits (897), Expect = 4.490e-118 Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
ISNSWNPRLRHAYINWDMG RSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQ+RWTEG QFALENPATRIDEL TGVNRRLDNAETIPD+IARYNG+ GDL+WT AAMGRQLGYESRL+SGEKLASD+TWGYGLS+AGKWQL +GD+RFMLNQGSALGRYMGLNTFDDGYIDSNGD
Sbjct: 146 ISNSWNPRLRHAYINWDMGEGRSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQVRWTEGNFQFALENPATRIDELSDTGVNRRLDNAETIPDLIARYNGTAGDLSWTLAAMGRQLGYESRLNSGEKLASDDTWGYGLSLAGKWQLANGDMRFMLNQGSALGRYMGLNTFDDGYIDSNGD 329
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: UPI001F49B36A (TonB-dependent receptor n=2 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI001F49B36A) HSP 1 Score: 268 bits (684), Expect = 1.090e-85 Identity = 124/183 (67.76%), Postives = 149/183 (81.42%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNG 549
ISNSWN RLRHA++NW+ G RSL+AGQSWSTFFNVGALPD+LDFVGPV TIFVRQPQIRWT G LQ +LENPATR++E GV RLD+ ET+PD+IARYNG G+L+W+ AA+GRQL YE+R S ++A D +GYGLS+AGKW LG DLRFM + G ALGRY+GLN ++DGYID+ G
Sbjct: 159 ISNSWNSRLRHAFVNWEYGEGRSLMAGQSWSTFFNVGALPDVLDFVGPVGTIFVRQPQIRWTSGPLQLSLENPATRLNESSDGGVTTRLDDVETLPDIIARYNGEAGELSWSVAALGRQLSYEARSGSAVEVADDSRFGYGLSLAGKWTLGRDDLRFMFSYGDALGRYLGLNAYNDGYIDAGG 341
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A5C9A0E0_9GAMM (Porin n=2 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A0E0_9GAMM) HSP 1 Score: 261 bits (666), Expect = 4.500e-83 Identity = 120/184 (65.22%), Postives = 146/184 (79.35%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
ISNSWN RLRHA++NWD S+LAGQ+WSTFFNVGALPD+LDFVGPV TIF RQP IRWT G LQ ALENPATR+++ V+ RLD+AE++PD++ARYNG GDL+W+ A + R+L YE+R S + ASD +GYGLS+AGKW LG DLRFM + G ALGRY+GLN F+DGYID+NGD
Sbjct: 151 ISNSWNSRLRHAFVNWDYAEGSSILAGQTWSTFFNVGALPDVLDFVGPVGTIFNRQPMIRWTSGPLQLALENPATRLNQFSGGSVSTRLDDAESMPDIVARYNGKAGDLSWSIAGIARELDYEARSDSATEAASDSQFGYGLSLAGKWMLGRDDLRFMFSYGDALGRYLGLNAFNDGYIDANGD 334
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A496XLV9_9GAMM (Porin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XLV9_9GAMM) HSP 1 Score: 255 bits (652), Expect = 9.510e-81 Identity = 120/185 (64.86%), Postives = 146/185 (78.92%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGE-KLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
ISNSWN R+RHA++ WD SL+AGQSWSTFFNV ALPD+LDFVGPV TIF+RQPQIRWT G LQ A+ENPATR++E A G RLD++ETIPD+IARYNG G+L+W+ A M RQL Y+ R ++ SD +GYGLS+AGKW+LG D RFM N GSALGRY+GLN+++DGYID+NGD
Sbjct: 168 ISNSWNSRIRHAFVKWDYDEGSSLMAGQSWSTFFNVSALPDVLDFVGPVGTIFIRQPQIRWTSGGLQLAVENPATRLNESIAGGNTTRLDDSETIPDLIARYNGKAGELSWSVAGMARQLSYDDRSGGNSYEIDSDTEYGYGLSLAGKWKLGKDDFRFMFNYGSALGRYLGLNSYNDGYIDANGD 352
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A4A425_9GAMM (Uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 TaxID=314285 RepID=A4A425_9GAMM) HSP 1 Score: 245 bits (626), Expect = 6.730e-77 Identity = 114/184 (61.96%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
+SNS++ R+RHAY+ WD G ++SLLAGQ+WSTFFNVGALPDLLDFVGPV T+F RQP IRWT G +Q A+EN TR++ G L++A+ +PD++ARYNG GDLNW+ AA+GRQL YE R ++ + ASDE +GYGLS AGKW +G DLRFM + G ALGRYMGLN+F+DGYID NG+
Sbjct: 167 VSNSFSSRIRHAYLKWDYGDQKSLLAGQAWSTFFNVGALPDLLDFVGPVGTVFERQPMIRWTSGPVQLAIENQTTRVNLQGG---GSSLNDAQLMPDLVARYNGKSGDLNWSLAAIGRQLSYEERPNASTEGASDEEYGYGLSFAGKWNIGRNDLRFMASYGDALGRYMGLNSFNDGYIDRNGE 347
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A3C1NPW1_9GAMM (Porin (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C1NPW1_9GAMM) HSP 1 Score: 231 bits (590), Expect = 4.480e-75 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 1
Query: 199 QFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
QFALENPATRIDEL ATGVNRRLDNAET+PDMIARYNGSQGDLNWT AAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQL +GDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD
Sbjct: 1 QFALENPATRIDELSATGVNRRLDNAETLPDMIARYNGSQGDLNWTLAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLDNGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 118
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A496XCJ0_9GAMM (Porin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XCJ0_9GAMM) HSP 1 Score: 237 bits (605), Expect = 1.250e-73 Identity = 110/183 (60.11%), Postives = 138/183 (75.41%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNG 549
ISNSW+ RLRHA++ WD G + S++AGQSWSTFFNVGALPD+LDFVGP TIF+RQPQIRWT G LQ A+ENPATR+++ G + +N IPD+IARYNG GDL+W+ + M R L YE R S K +D+ +GY LS AGKW LG D+RFM N G ALGRYMGLN+++DGY+ ++G
Sbjct: 177 ISNSWSSRLRHAFVKWDYGEKSSIMAGQSWSTFFNVGALPDVLDFVGPAGTIFIRQPQIRWTMGGLQLAVENPATRLNDAGGSTY---YNNGNDIPDLIARYNGKMGDLSWSASGMARNLSYEDRTDSAIKGENDDQFGYALSFAGKWMLGKDDIRFMANFGDALGRYMGLNSYNDGYVKADG 356
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: A0A4Z0LXT5_9GAMM (Porin n=2 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0LXT5_9GAMM) HSP 1 Score: 232 bits (591), Expect = 9.070e-72 Identity = 114/184 (61.96%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRIDELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
ISNSWN RLRHA++ WD S++AGQSWSTFFNVGALPD LDFVGPV TIFVRQPQ+RWT G LQ A+EN ATR++ GV D+ E IPD+IARYN + G L+W+ A MGR+L YE R + + A+D +GY LS AGKW +G+ DLRFM N G ALGRYMGLN F+DGY+D++GD
Sbjct: 159 ISNSWNSRLRHAFLQWDYAKGSSIMAGQSWSTFFNVGALPDNLDFVGPVGTIFVRQPQVRWTMGGLQLAVENAATRLN-----GVAWDNDH-EGIPDLIARYNATMGSLSWSIAGMGRELSYEDRSNLSVEGANDSQYGYALSFAGKWGIGADDLRFMFNYGDALGRYMGLNAFNDGYVDTSGD 336
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Match: B8KFM8_9GAMM (Porin n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KFM8_9GAMM) HSP 1 Score: 229 bits (585), Expect = 7.400e-71 Identity = 109/185 (58.92%), Postives = 142/185 (76.76%), Query Frame = 1
Query: 1 ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSTIFVRQPQIRWTEGKLQFALENPATRID-ELGATGVNRRLDNAETIPDMIARYNGSQGDLNWTFAAMGRQLGYESRLSSGEKLASDETWGYGLSIAGKWQLGSGDLRFMLNQGSALGRYMGLNTFDDGYIDSNGD 552
+SNS++ R+RHAY+ WD E+SLLAGQ+WSTFFNVGALPDLLDFVGPV T+F RQP IRWT G Q A+EN TR++ G + ++ + + +PD++ARY+ GDL+W+ AA+GRQL YE R ++ + ASDE +GYGLS+AGKW LG DLRFM + G ALGRYMGLN+F+DGYI+ NG+
Sbjct: 157 VSNSFSSRIRHAYLKWDYAPEQSLLAGQAWSTFFNVGALPDLLDFVGPVGTVFERQPMIRWTSGPWQLAIENQTTRVNLPQGGSSIS----DGQLMPDLVARYDAKAGDLSWSLAAIGRQLSYEERPTASIEGASDEQFGYGLSLAGKWNLGRNDLRFMASYGDALGRYMGLNSFNDGYINVNGE 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117424.3598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117424.3598.1 >prot_M-pyrifera_M_contig117424.3598.1 ID=prot_M-pyrifera_M_contig117424.3598.1|Name=mRNA_M-pyrifera_M_contig117424.3598.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp ISNSWNPRLRHAYINWDMGAERSLLAGQSWSTFFNVGALPDLLDFVGPVSback to top mRNA from alignment at M-pyrifera_M_contig117424:3..554- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117424.3598.1 ID=mRNA_M-pyrifera_M_contig117424.3598.1|Name=mRNA_M-pyrifera_M_contig117424.3598.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117424:3..554- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117424:3..554- >mRNA_M-pyrifera_M_contig117424.3598.1 ID=mRNA_M-pyrifera_M_contig117424.3598.1|Name=mRNA_M-pyrifera_M_contig117424.3598.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig117424:3..554- (Macrocystis pyrifera P11B4 male)back to top |