mRNA_M-pyrifera_M_contig117422.3596.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: A0A7C1EN04_9BACT (VCBS repeat-containing protein n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7C1EN04_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 7.040e-16 Identity = 76/183 (41.53%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAV------TVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDL-IASQTDDDDNPVSGLTVFFNDGTGDFSTTTTISETANDL----------ALLDIDGDGDQDLVLANEGL--ITILNNNGSGSF 492
V V N DGTF A A TVG G + DVD D D D+I+++ +D TISV KNNG+GTFA F +T + + V GD DGDGDFD+ + S NP + V N G G+F T A DL A ++DGDGD DL +AN+G+ +TI N+GSGSF
Sbjct: 310 VCVFLNRQDGTFDANPAFSRPERYTVGYG-CRSIAAADVDGDGDQDIISANQEDGTISVLKNNGNGTFAPKVDF-LTPNNPPS-VVSGGDYDGDGDFDVAVVSLGKPPSNPGNSFAVLKNKGDGNFEVGTEFL--AGDLNVQGNIPFGIAAGNVDGDGDIDLAIANQGIHDVTIHRNDGSGSF 487
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI001F53178B (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter sp. DH14 TaxID=2926463 RepID=UPI001F53178B) HSP 1 Score: 84.0 bits (206), Expect = 8.900e-16 Identity = 72/172 (41.86%), Postives = 92/172 (53.49%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISV--AKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVFFNDGTGDFSTTTTISETAN--DLALLDIDGDGDQDLVLAN--EGLITILNNNGSGSFTT 498
V + NDG G FTA TVG P RV L D+D DNDLDL+ + SV +NNG GTFA S N G G+ GD+DGDGD D + + D + T N+G+G FST ++ T + D+AL D+DGDGD DLV AN + + NNG+G T
Sbjct: 335 VSIRLNDGHGAFTATPDPTVGVAPQ-RVALGDIDGDNDLDLLVAGNSTANGSVFWLRNNGSGTFAIIS--NSYAGGAPRGL-ALGDLDGDGDLDYVVANWD---STPHIATTSLNNGSGSFSTRQAVTFTTSPGDVALGDLDGDGDLDLVTANTANNALGVRLNNGTGPLAT 499
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI0018AF9481 (FG-GAP-like repeat-containing protein n=1 Tax=Hymenobacter properus TaxID=2791026 RepID=UPI0018AF9481) HSP 1 Score: 82.8 bits (203), Expect = 2.270e-15 Identity = 72/179 (40.22%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDDN-TISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVF--FNDGTGDFSTTT-----TISETANDLALLDIDGDGDQDLVLAN----EGLITILNNNGSGSFTTS 501
V + FN+G G F+ S V +G Y V L D+D D DLDL+ ++ + N T+SV NNG+GTF + SS Y G GD+DG+GD DL+ + T + SG TV N+G G F+T T T S+ LAL D+D DGD DL+ N +++ N+G GSFT S
Sbjct: 186 VSLGFNNGSGVFSRGSDVAIGLICY-GVALGDLDGDGDLDLLIANQEQNGTVSVRLNNGNGTFVAPSSTPEVTVSSYPGSVIVGDVDGNGDLDLLTAATINTYGTNSGNTVSVRLNNGAGVFTTPTRNPEVTFSKDITGLALGDVDSDGDFDLLTTNYRSSAAAMSVRLNDGQGSFTAS 363
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: A0A3S0IRU3_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter gummosus TaxID=1776032 RepID=A0A3S0IRU3_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 4.850e-15 Identity = 70/174 (40.23%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDD--NTISVAKNNGDGTFASHSSFNMT-GSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVFFNDGTGDFSTTTTISETAND---LALLDIDGDGDQDLVL--ANEGLITILNNNGSGSFTT 498
V+V FNDG G F+ V V GP++ V+L+DVD D DLD++T + +T SV N+G G F + S +T GS GD+D DGD D++ S + T+ NDGTG F+ +TT + D LAL D+D DGD DL++ N GL T+ N+G G+F T
Sbjct: 1836 VYVRFNDGRGAFSGSLEVPVEEGPHI-VELVDVDGDGDLDIVTGNSGQAASTTSVRFNDGLGNFPTGSDERLTLGSNQTCRHLLFGDVDNDGDLDMVFSTS-------FASTLRLNDGTGHFTRSTTSWQVPGDFTALALRDVDLDGDLDLMVLRVNTGL-TVHVNDGRGNFPT 2000
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: A0A7K1TDA0_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter ginkgonis TaxID=2682976 RepID=A0A7K1TDA0_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 5.740e-15 Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 7 VLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDD--NTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFD-LIASQTDDDDNPVSGLTVFFNDGTGD---FSTTTTISETANDL--ALLDIDGDGDQDLVLAN--EGLITILNNNGSGSF 492
V NDG G+F V VG GP+ +V L D+D D DLD++T++ D N +SV NNG G F + S+N+TG G GD++GDG D L+A TD+ S ++V N+GTG F+ + ++ +A L AL D+DGDGD D V A+ + ++ N+G+G F
Sbjct: 194 VRINDGRGSFAGGQEVPVGRGPF-QVVLADLDNDGDLDMLTANSADLTNQVSVRLNNGAGGFGT--SYNLTGLGQNPHGLAVGDVNGDGRLDVLVAFYTDNQAATSSSVSVLLNNGTGTAPLFTASQDVAVSARPLNVALGDVDGDGDLDFVSASSKDSTASVRLNDGAGRF 362
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI0016884009 (FG-GAP-like repeat-containing protein n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI0016884009) HSP 1 Score: 81.3 bits (199), Expect = 8.920e-15 Identity = 67/177 (37.85%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSA---VTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISVAKNNGDGTFASHSS--FNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVFFNDGTGDFSTTTT-----ISETANDLALLDIDGDGDQDLVLAN--EGLITILNNNGSGSFT 495
V V N+G G FT VG P+ V L DVD D DLDL+T++ +T+SV NNG G F H + GSG + V GD+DGDGD DL+ + D+ ++V NDG+G+F+ T + +AL D+DGDGD D + N +++ N+GSG+FT
Sbjct: 657 VSVRLNNGSGNFTPHPTNPNPAVGNLPW-SVVLGDVDGDGDLDLLTANLGSSTVSVLLNNGSGNFTPHPTNPAPAVGSGPRSVVL--GDVDGDGDLDLLTANLGSDN-----VSVRLNDGSGNFTAPATNPNPAVGSHPQSVALGDVDGDGDLDFIATNAYSDNVSVRLNDGSGNFT 825
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI0019BFDC07 (VCBS repeat-containing protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI0019BFDC07) HSP 1 Score: 80.5 bits (197), Expect = 1.420e-14 Identity = 69/182 (37.91%), Postives = 96/182 (52.75%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDD-------NTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNP--VSGLTVFFNDGTGDFSTTTTISETA--NDLALLDIDGDGDQDLVLANEG-------LITILNNNGSGSF 492
V VL N+G+GTF + VG P + + D+D D DLDL T + D +T+SV +NNG+GTFA+ SF TG + GDIDGDGD DL+ + N V +TV N+G G F+ A + + D+DGDGD DL +AN +T+L N+G+G+F
Sbjct: 120 VSVLKNNGNGTFANAQTLAVGDYPT-SITVGDLDGDGDLDLATVNIGDYVYPGFQSTVSVLRNNGNGTFAAAQSF-TTGKSAFEITI--GDIDGDGDLDLVTTYGAGYTNSRYVGYVTVLKNNGNGTFAEPQDFPSGAYPTSITIGDLDGDGDLDLAIANNSGFRYFFSYLTVLKNDGNGNF 297
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: A0A243W674_9BACT (Uncharacterized protein n=2 Tax=Hymenobacter crusticola TaxID=1770526 RepID=A0A243W674_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 1.660e-14 Identity = 69/174 (39.66%), Postives = 96/174 (55.17%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVFFNDGTG-----DFSTTTTISETAN--DLALLDIDGDGDQDLVLA--NEGLITILNNNGSGSFT 495
+ V NDG GTFT +TVG GP V L D++ D LDL+T++ T+SV N G G+F + GSG G+ GD+DGDGD DL+ + D N S + + N+GTG DFS +S + ++AL D+DGDGD D V + N +++ NNG+G FT
Sbjct: 1171 ITVRRNDGTGTFTNAQHLTVGRGPTQAV-LADLNGDGTLDLLTANSSSATVSVRLNTGSGSFGPGAE---VGSGNIHGIAV-GDVDGDGDQDLLLA----DYNEPSTVAIGLNNGTGTFPFFDFSAARRVSVGSRPINIALGDVDGDGDLDFVTSSSNGTTVSVRVNNGTGIFT 1335
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI00168BF863 (FG-GAP-like repeat-containing protein n=1 Tax=Spirosoma validum TaxID=2771355 RepID=UPI00168BF863) HSP 1 Score: 79.0 bits (193), Expect = 5.600e-14 Identity = 64/156 (41.03%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSA---VTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSGLTVFFNDGTGDFSTTTT-----ISETANDLALLDIDGDGDQDLVLA 444
V V N+G GTFTA + VG P + L D+D D+DLDL+T++ + NT+SV NNG GTF + + G G GD+DGDGD DL+ + N S ++V NDGTG+F+ T I A +AL D+DGD D DL++A
Sbjct: 342 VSVRLNNGAGTFTAPATNPDSNVGIFPT-SIALGDLDGDSDLDLVTNNKNSNTVSVRLNNGVGTFTAPAINPEPVVGDSPGSVALGDVDGDGDLDLLVA------NSYSPVSVRLNDGTGNFTPPATNPDPTIGAYAISVALGDVDGDSDLDLLVA 490
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Match: UPI001687A47A (FG-GAP-like repeat-containing protein n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI001687A47A) HSP 1 Score: 78.6 bits (192), Expect = 7.660e-14 Identity = 67/176 (38.07%), Postives = 92/176 (52.27%), Query Frame = 1
Query: 1 VHVLFNDGDGTFTAQSA---VTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTISVAKNNGDGTFASHSSFNMTGSGVYTGVFESGDIDGDGDFDLIASQTDDDDNPVSG-LTVFFNDGTGDFSTTTT-----ISETANDLALLDIDGDGDQDLVLANEG--LITILNNNGSGSFT 495
V V FN+G G FT + + VG G V L DVD D DLD +TS++ DN +SV N+G G F ++ GD+DGD D DL+ + N S ++V N+G G+F+ T + E +AL D+DGDGD DLV AN +++ NNGSG+FT
Sbjct: 848 VSVRFNNGSGNFTPPAINPEIVVGSGAS-SVALGDVDGDGDLDFVTSNYGDNNVSVRLNDGVGNFTPPATNPNPAVDNSPWSVALGDVDGDSDLDLLTA------NYYSNTVSVRLNNGAGNFTLPATNPNPVVGEYPFSVALGDVDGDGDLDLVTANGAGNTVSVRLNNGSGNFT 1016 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117422.3596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117422.3596.1 >prot_M-pyrifera_M_contig117422.3596.1 ID=prot_M-pyrifera_M_contig117422.3596.1|Name=mRNA_M-pyrifera_M_contig117422.3596.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp VHVLFNDGDGTFTAQSAVTVGGGPYLRVQLIDVDLDNDLDLITSDWDDNTback to top mRNA from alignment at M-pyrifera_M_contig117422:37..537+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117422.3596.1 ID=mRNA_M-pyrifera_M_contig117422.3596.1|Name=mRNA_M-pyrifera_M_contig117422.3596.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig117422:37..537+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117422:37..537+ >mRNA_M-pyrifera_M_contig117422.3596.1 ID=mRNA_M-pyrifera_M_contig117422.3596.1|Name=mRNA_M-pyrifera_M_contig117422.3596.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig117422:37..537+ (Macrocystis pyrifera P11B4 male)back to top |