mRNA_M-pyrifera_M_contig117280.3574.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A7S3LQK3_9STRA (Importin subunit alpha n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQK3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.650e-41 Identity = 79/185 (42.70%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNES-SVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHGKRNARREACWMASNIAAGTK 552
N+AGD S RD +L++PGA+ L+ N+++P ++ RN W L+NLCR KP ++ VL +F L ED+E L DV W SY++D RI A+++ C +CK+ NE+ V P LR +GN+ TGSDDQTQ V AG+L + + H K+ R+EACW ASNI AGTK
Sbjct: 181 NIAGDKSEFRDMVLTSPGALEGLLLNMQNPSGVAMQRNVAWTLSNLCRGKPPTDLSLIQPVLPLFSHTLKSCEDIETLIDVAWACSYVSDGTNERIQALIELDLCTTLVQLCKKY-----RNENVKVISPVLRTLGNIVTGSDDQTQAAVNAGLLREIVPLAEHSKQTIRKEACWTASNITAGTK 360
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A5A8CP33_CAFRO (Importin subunit alpha n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP33_CAFRO) HSP 1 Score: 154 bits (389), Expect = 9.140e-41 Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 1
Query: 10 GDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDAD---PGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHGKRNARREACWMASNIAAGTK 552
GDG + RD LL TP VA L N++ P + SLLRNA WA++N CR KP P + VL + V L S D ++L D LWGLSYLTD G++ + +C +V+ L S V +PALR +GN+ +G DDQT+ ++ AG L + K++ KRN RREACW ASNIAAGTK
Sbjct: 179 GDGPTYRDMLLDTPDCVAALTLNIQAPANVSLLRNATWAMSNFCRGKPKPDPAKLGSVLGVLVGLLRSS-DKDVLADALWGLSYLTDGSITFSGQLIGMEGALSC---------LVDSLRHERSGVVIPALRTIGNIVSGDDDQTEALIDAGCLGPMAKLVSSDKRNIRREACWAASNIAAGTK 352
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A6V3SCZ5_9EUKA (Importin subunit alpha n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3SCZ5_9EUKA) HSP 1 Score: 144 bits (362), Expect = 4.200e-37 Identity = 75/183 (40.98%), Postives = 111/183 (60.66%), Query Frame = 1
Query: 4 VAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHGKRNARREACWMASNIAAGTK 552
+AGD LRD +L GA+ +++NV+ P + SLLRN +W+L+NLCR KP + V + + L + +D + L D W LSY+TD D RI +V K P +V L + + PALR +GN+ TG+D+QTQ V+ +GILP + +L+H K+ R+EACW+ SN+AAG+K
Sbjct: 229 IAGDCPDLRDLVLDN-GALDPILQNVQAPATISLLRNTVWSLSNLCRGKPAVRTEVATKVTPLLAQVLMQCQDDDTLIDTCWALSYITDGDNERIDILVQQKQVVP------VLVGYLSHRSAQLIAPALRTLGNIVTGNDEQTQLVLDSGILPNMLNLLQHPKKALRKEACWLISNVAAGSK 404
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A2R5GYA6_9STRA (Protein unc-45 homolog B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYA6_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.340e-37 Identity = 75/185 (40.54%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCR-NKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHGKRNARREACWMASNIAAGTK 552
NVAGD SSLRDQ+L+TPG L+ N++ P + S++RN WA++NLCR +KP P+ + V + + R + S D E D W LSY++D + R+ A+V T VC +V++L S P LR +GN+ TG D TQ + AG+L L ++ +H K + R+E W SN+ AGTK
Sbjct: 758 NVAGDCSSLRDQVLATPGLPEGLLANLQQPANVSMMRNVTWAVSNLCRGSKPRPALNMVAPYVPVLARIIESSGDEEATVDACWALSYVSDGENERLDAIVQ-------TGVCPTLVKLLRSGMSKCVPPCLRTLGNIVTGEDKHTQAAIDAGLLRELQELFQHPKMSIRKEVAWTCSNVTAGTK 935
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: B7G6K5_PHATC (Importin subunit alpha n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6K5_PHATC) HSP 1 Score: 139 bits (349), Expect = 4.010e-35 Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESED-------VELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNE--SSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHGKRNARREACWMASNIAAGTK 552
NVAGD RD LL+TP +++N+ P + SLL+N WA++NLCR KP P AV ++ V L+E E+ V+L D LW LSYL+D D RI+AV++ V K ++ + D + S+ +PA+R +GN +GS QT V+ AG R+ K+L H + +++ACW ASNIAAGT+
Sbjct: 199 NVAGDSIENRDGLLATPMLTNGMLKNISRPANLSLLQNFTWAISNLCRFKPSPDFGAVAPFISALVNILNEVENGVGAESAVDLQTDTLWALSYLSDGDDARINAVLE-------AGVLKLLMNIFDNDSVPSNTLLPAVRVIGNCVSGSHAQTDAVIRAGFTERVGKLLHHPSKTVQKDACWAASNIAAGTE 384
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A5P1EGY6_ASPOF (Importin subunit alpha n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EGY6_ASPOF) HSP 1 Score: 135 bits (341), Expect = 3.480e-34 Identity = 79/185 (42.70%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHG-KRNARREACWMASNIAAGTK 552
NVAGD RD +L++ + +L + EH + S+LRNA W L+N CR KP PS + + L R ++ S D E+L D W LSYL+D +I AV+++ VC R+VE+L SV +PALRAVGN+ TG D QTQ ++ LP L +L H K++ ++EACW SNI AG K
Sbjct: 184 NVAGDSPKCRDLVLASGALLPLLAQLNEHAKL-SMLRNATWTLSNFCRGKPQPSFEQTKPALPALERLIN-SNDEEVLTDACWALSYLSDGTNDKIQAVIESG-------VCPRLVELLLHPSPSVLIPALRAVGNIVTGDDVQTQCIINHQALPCLLNLLTHNYKKSIKKEACWTISNITAGNK 359
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A6D2HKV7_9BRAS (Importin subunit alpha n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HKV7_9BRAS) HSP 1 Score: 135 bits (340), Expect = 5.420e-34 Identity = 80/185 (43.24%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHG-KRNARREACWMASNIAAGTK 552
NVAGD RD +L + GA+A ++ + S+LRNA W L+N CR KP P D V+ L F R L S D E+L D W LSYL+D +I AV++ V R+VE+L SV +PALR VGN+ TG D QTQ V+++G LP L +L K++ ++EACW SNI AG +
Sbjct: 183 NVAGDSPQCRDLVLGS-GAMAPMLNQLNEHAKLSMLRNATWTLSNFCRGKPPPVFDQVKPALLAFER-LVLSNDEEVLTDTCWALSYLSDGTNDKIQAVIE-------AGVVPRLVELLLHPSPSVLIPALRCVGNIVTGDDQQTQWVISSGALPCLANLLTQNYKKSIKKEACWAISNITAGNR 358
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A6P5WTY2_DURZI (Importin subunit alpha n=2 Tax=malvids TaxID=91836 RepID=A0A6P5WTY2_DURZI) HSP 1 Score: 129 bits (325), Expect = 6.790e-32 Identity = 76/185 (41.08%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKIL-RHGKRNARREACWMASNIAAGTK 552
NVAGD S RD +L + GA+ L+ + S+LRNA W L+N CR KP + V+ L I +R L D E+L D W LSYL+D +I AV++ VC ++VE+L +V +PALR VGN+ TG D+QTQ V+ +LP L ++L ++ K++ ++EACW SNI AG +
Sbjct: 188 NVAGDSPSCRDLVLGS-GALMPLLAQLNERSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPI-LRELIYLNDEEVLTDACWALSYLSDGPNDKIQAVIE-------AGVCPQLVELLGHPSPTVLIPALRTVGNIVTGDDNQTQFVIDNKVLPHLYQLLVQNHKKSIKKEACWTISNITAGNR 363
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A6A2YJS6_HIBSY (Importin subunit alpha n=4 Tax=Malvoideae TaxID=214907 RepID=A0A6A2YJS6_HIBSY) HSP 1 Score: 126 bits (316), Expect = 5.430e-31 Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHG-KRNARREACW 522
NVAGD RD +L GA+ L+ S+LRNA W L+N CR KP PS + + L R +H ++D E+L DV W LSYL+D +I AV+D VC R+VE+L + +V +PALR VGN+ TG D QTQ ++ LP L +L + K++ ++EACW
Sbjct: 108 NVAGDSPKCRDLVLGC-GALMPLLAQFNENAKLSMLRNATWTLSNFCRGKPQPSFEQTKPALPTLERLIHSNDD-EVLTDVCWALSYLSDGTNDKIQAVID-------AGVCPRLVELLTHSSPTVLIPALRTVGNIVTGDDMQTQCIINHQALPSLLNLLTNNYKKSIKKEACW 273
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Match: A0A813AVG5_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813AVG5_9DINO) HSP 1 Score: 127 bits (318), Expect = 1.590e-30 Identity = 76/205 (37.07%), Postives = 108/205 (52.68%), Query Frame = 1
Query: 1 NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKPLPSKDAVEDVLAIFVRALHESEDVELLPDVLWGLSYLTDADPGRISAVVDNKACGPDTDVCKRMVEMLDLNESSVTMPALRAVGNVCTGSDDQTQQVVAAGILPRLTKILRHG----------------------KRNARREACWMASNIAAGT 549
N+AGD RD +ST G++A +++ +E S +RNA W ++N CR P PS +A+ L + R LH + D E+L D LW +SY++D I AV+D VC+R+VE+L + V PALR VGN+ TGSD QT V+A P LT+++ R++R E CW+ SNI AGT
Sbjct: 542 NIAGDSVQHRDLCIST-GSLAEVLKVLEGTTKTSCIRNATWTVSNFCRGTPKPSLEAMLPALPVMARVLHNT-DQEVLTDALWTVSYVSDGTERYIQAVLD-------AGVCQRVVELLSHDSPQVQTPALRTVGNIVTGSDTQTDAVLACEPFPALTRLVTSNLPAHMRWRRWPPTASWASCLWLPRSSREECCWLLSNICAGT 737 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117280.3574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117280.3574.1 >prot_M-pyrifera_M_contig117280.3574.1 ID=prot_M-pyrifera_M_contig117280.3574.1|Name=mRNA_M-pyrifera_M_contig117280.3574.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp NVAGDGSSLRDQLLSTPGAVAILIRNVEHPESESLLRNAMWALANLCRNKback to top mRNA from alignment at M-pyrifera_M_contig117280:3..554- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117280.3574.1 ID=mRNA_M-pyrifera_M_contig117280.3574.1|Name=mRNA_M-pyrifera_M_contig117280.3574.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig117280:3..554- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117280:3..554- >mRNA_M-pyrifera_M_contig117280.3574.1 ID=mRNA_M-pyrifera_M_contig117280.3574.1|Name=mRNA_M-pyrifera_M_contig117280.3574.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig117280:3..554- (Macrocystis pyrifera P11B4 male)back to top |