prot_M-pyrifera_M_contig117263.3570.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117263.3570.1
Unique Nameprot_M-pyrifera_M_contig117263.3570.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length95
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117263.3570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..94
e-value: 9.3E-18
score: 66.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..90
IPR006575RWD domainPFAMPF05773RWDcoord: 2..89
e-value: 1.2E-12
score: 48.1
IPR006575RWD domainPROSITEPS50908RWDcoord: 6..95
score: 15.284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117263contigM-pyrifera_M_contig117263:200..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117263.3570.1mRNA_M-pyrifera_M_contig117263.3570.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117263 200..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117263.3570.1 ID=prot_M-pyrifera_M_contig117263.3570.1|Name=mRNA_M-pyrifera_M_contig117263.3570.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp
AEEQAQELEVLACIYQGDEMHVTQVGSAPASFCIRLSPTDAEDMVHKGAR
ITMAVQYNRRYPRAAPVISFSDPENMEPEHVEELEETVKTRVRPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR006575RWD-domain