mRNA_M-pyrifera_M_contig11726.3567.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11726.3567.1
Unique NamemRNA_M-pyrifera_M_contig11726.3567.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A0U2S7L5_9EUGL (Cytochrome b n=2 Tax=unclassified Perkinsela TaxID=2639366 RepID=A0A0U2S7L5_9EUGL)

HSP 1 Score: 395 bits (1015), Expect = 1.160e-135
Identity = 201/247 (81.38%), Postives = 219/247 (88.66%), Query Frame = 1
Query:    7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSIDRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            LTKLFS+GFNLG+CC +QIALGFMLC VYSNS+KDSF IMY INDNELGSLLRLAHS+MASIIY LIFTH+FK M YGLVFESAH V LSGFCIF+ LIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPA+GNLMIYWF GGEFINEFTLLKVHVLHIVLPM LLG             SSD+IDRFVFYNER+MFMY FYFRD++++LF+CV+L+ GVF+Y SFVFHEESFIIVNTQKTPEKVMPE
Sbjct:   27 LTKLFSIGFNLGVCCTLQIALGFMLCWVYSNSIKDSFQIMYSINDNELGSLLRLAHSTMASIIYFLIFTHIFKAMFYGLVFESAHWVWLSGFCIFLTLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAMGNLMIYWFWGGEFINEFTLLKVHVLHIVLPMGLLGMIVMHMYLLHQYVSSDAIDRFVFYNERIMFMYWFYFRDLNIMLFICVVLNYGVFIYWSFVFHEESFIIVNTQKTPEKVMPE 273          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A077ERL4_9TRYP (Cytochrome b n=6 Tax=Trypanosomatidae TaxID=5654 RepID=A0A077ERL4_9TRYP)

HSP 1 Score: 183 bits (465), Expect = 6.090e-54
Identity = 103/238 (43.28%), Postives = 151/238 (63.45%), Query Frame = 1
Query:   37 LGICCAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            L I C + +A  F  C + +N     + +++L  D +LG ++R AH    S++Y L++ H+FKV++  ++F++   V   GF IF+ LIV+ F+GY LP T MS+WGLTVFSNIL+T+P IG  + YW  G EFIN+FTL+K+HVLH++LP  L+              SSD   DRF FY ERL+F   FY RD+ +  F+   +   +F+   FVFHEES++IV+T KT +K++PE
Sbjct:    3 LQIVCGVCLAWLFFSCFICTNW----YFVLFLW-DFDLGFVIRSAHIVFTSLLYFLLYVHIFKVIVLIILFDTHILVWAVGFVIFIFLIVIAFIGYTLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEFINDFTLVKLHVLHVLLPFVLILVLFMHLFCLHYFMSSDGFCDRFAFYAERLVFCMWFYLRDMFLAFFILFCVMYFIFINWYFVFHEESWVIVDTLKTSDKILPE 235          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_TRYBO (Cytochrome b n=1 Tax=Trypanoplasma borreli TaxID=5710 RepID=CYB_TRYBO)

HSP 1 Score: 176 bits (447), Expect = 6.830e-50
Identity = 102/250 (40.80%), Postives = 153/250 (61.20%), Query Frame = 1
Query:    7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSL-KDSFMIMYLIN-DNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            L +++ +GFNLG+  A+QI +G  L   +   +   +++   LI+ + +LG ++R  H    S++Y L++ H+ KV+   L+F+S+  V   GF IF+ ++++ F+GY LP T MS+WGLTVFSNIL+TIP IG  +  W    EFIN+FTLLK+H +HI LP  LL              SSD + DRF FY ER  F      RD+ +++ +   L   + +Y  FVFHEES+IIV+T KT +K++PE
Sbjct:   26 LFRVYGLGFNLGVMIALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLYFLLYIHIIKVIFLCLIFDSSMLVWFFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHSIHIFLPFVLLFLIGAHFFVLHYFLSSDGLLDRFPFYYERFFFFLLXXLRDLFLIINILCFLIYYICIYWFFVFHEESWIIVDTLKTSDKILPE 275          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_LEITA (Cytochrome b n=122 Tax=Trypanosomatidae TaxID=5654 RepID=CYB_LEITA)

HSP 1 Score: 172 bits (435), Expect = 4.040e-48
Identity = 98/249 (39.36%), Postives = 149/249 (59.84%), Query Frame = 1
Query:    7 LTKLFSVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            L +++ VGF+LG    +QI  G  L  ++ S  +  ++  +  + D +LG ++R  H    S+++ L++ H+FK ++  ++F++   V   GF I++        GYVLP T MS+WGLTVFSNIL+T+P IG  + YW  G E+IN+FTLLK+HVLH++LP  L+              SSD   DRF FY ERL F   FY RD+ +   +   +   +F+   FVFHEES++IV+T KT +K++PE
Sbjct:   26 LLRVYGVGFSLGFFICMQIICGVCLAWLFFSCFICTNWYFVLFLWDFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWAVGFIIYIFXXXXXXXGYVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLHVLHVLLPFVLILVIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFYVVYFIFINWYFVFHEESWVIVDTLKTSDKILPE 274          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A120H2G7_9TRYP (Cytochrome b (Fragment) n=3 Tax=Trypanosomatidae TaxID=5654 RepID=A0A120H2G7_9TRYP)

HSP 1 Score: 149 bits (376), Expect = 1.650e-41
Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  286 IFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            I++ ++++ F+GYVLP T MS+WGLTVFSNIL+T+P IG  + YW  G EFIN+FTLLK+HVLH++LP  L+              SSD+  DRF FY ERL F   FY RD+ +   +   +   VF+   FVFHEES++IV+T KT +K++PE
Sbjct:    2 IYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEFINDFTLLKLHVLHVLLPFVLILVIFLHLFCLHYFMSSDAFCDRFAFYCERLCFCMWFYLRDMFLAFMILFCVMYFVFINWYFVFHEESWVIVDTLKTSDKILPE 156          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A2Z2CNG4_LEIMA (Cytochrome b (Fragment) n=321 Tax=Leishmaniinae TaxID=1286322 RepID=A0A2Z2CNG4_LEIMA)

HSP 1 Score: 151 bits (382), Expect = 3.980e-41
Identity = 91/244 (37.30%), Postives = 138/244 (56.56%), Query Frame = 1
Query:   22 SVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
             VGF+LG    +QI  G  L  ++ S  +  ++  + ++   +LG ++R  H    S+++ L++ H+FK ++  ++F++   V                   VLP T MS+WGLTVFSNIL+T+P IG  + YW  G E+IN+FTLLK+HVLH++LP  L+              SSD   DRF FY ERL F   FY RD+ +   +   +   +F+   FVFHEES++IV+T KT +K++PE
Sbjct:    1 GVGFSLGFFICMQIICGVCLAWLFFSCFICTNWYYVLVLWRFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLHVLHVLLPFVLILVIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFFVIYFIFINWYFVFHEESWVIVDTLKTSDKILPE 244          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A173M8D5_LEIGU (Cytochrome b (Fragment) n=4 Tax=Viannia TaxID=37616 RepID=A0A173M8D5_LEIGU)

HSP 1 Score: 147 bits (371), Expect = 3.710e-40
Identity = 89/234 (38.03%), Postives = 132/234 (56.41%), Query Frame = 1
Query:   49 CAIQIALGFMLC*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            C + +A  F  C + +N     + +++L  D +LG ++R  H    S+++ L++ H+FK ++  ++F++   V                   VLP T MS+WGLTVFSNIL+T+P IG  + YW  G E+IN+FTLLK+HVLH++LP  LL              SSD   DRF FY ERL F   FY RD+ +   +   +   +F+   FVFHEES +IV+T KT +K++PE
Sbjct:    1 CGVCLAWLFFSCFICTNW----YFVLFLW-DFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHILVWXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGVWLCYWIWGSEYINDFTLLKLHVLHVLLPFILLIIIFMHLFCLHYFMSSDGFCDRFAFYCERLCFCMWFYLRDMFLAFLILFFIVYFIFINWYFVFHEESCVIVDTLKTSDKILPE 229          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: CYB_TRYBB (Cytochrome b n=7 Tax=Trypanosoma TaxID=5690 RepID=CYB_TRYBB)

HSP 1 Score: 142 bits (359), Expect = 5.640e-37
Identity = 90/249 (36.14%), Postives = 133/249 (53.41%), Query Frame = 1
Query:    7 LTKLFSVGFNLGICCAIQIALGFMLC*VY-SNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            L +++ VGF+LG   A+QI  G  L  ++ S  +  ++  +  + D +LG ++R  H    S++YLL++                                       LP T MS+WGLTVFSNI++T+P +G  + YW  G EFIN+FTLLK+HVLH++LP  LL              SSD+  DRF FY ERL F   FY RD+ +   + + +   +F+   FVFHEES++IV+T KT +K++PE
Sbjct:   18 LYRIYGVGFSLGFFIALQIICGVCLAWLFFSCFICSNWYFVLFLWDFDLGFVIRSVHICFTSLLYLLLYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPCTMMSYWGLTVFSNIIATVPILGIWLCYWIWGSEFINDFTLLKLHVLHVLLPFILLIILILHLFCLHYFMSSDAFCDRFAFYCERLSFCMWFYLRDMFLAFSILLCMMYVIFINWYFVFHEESWVIVDTLKTSDKILPE 266          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A3G3MCM2_BODSA (Cytochrome b n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A3G3MCM2_BODSA)

HSP 1 Score: 141 bits (356), Expect = 8.060e-37
Identity = 91/233 (39.06%), Postives = 124/233 (53.22%), Query Frame = 1
Query:   55 IQIALGFML-C*VYSNSLKDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHVLLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            +QI +G  L C  ++  L  ++  +  + D +LG ++R  H    S+IYLLI+ H+FK                                 VLP T MS+WGLTVFSNIL+T+P IG  + YW  G EFIN+FTLLK+H LHI+LP  +L              SSD   DRF FY ERL+F   FY RD  +   + +  S  V +   FVFHEES++IV+  KT +K++PE
Sbjct:    3 LQILVGICLSCMFFNCYLSLNWYFVLFLWDFDLGFIVRSLHICFTSLIYLLIYIHIFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNILATVPVIGVWLCYWIWGCEFINDFTLLKLHSLHILLPFLMLFVIVLHFFCLHYFMSSDGFCDRFSFYVERLVFFMWFYLRDCFLFFLIIMSFSYFVIINWYFVFHEESWVIVDVLKTSDKILPE 235          
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Match: A0A0E3J9X0_TRYVI (Cytochrome b n=1 Tax=Trypanosoma vivax TaxID=5699 RepID=A0A0E3J9X0_TRYVI)

HSP 1 Score: 137 bits (346), Expect = 5.190e-35
Identity = 93/252 (36.90%), Postives = 133/252 (52.78%), Query Frame = 1
Query:    7 LTKLFSVGFNLGICCAIQIALGFMLC*VYSNSL--KDSFMIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*V*LSGFCIFMVLIVLTFLGYVLPMTQMSFWGLTVFSNILSTIPAIGNLMIYWF*GGEFINEFTLLKVHVLHIVLPMALLGXXXXXXXXXXXXXSSDSI-DRFVFYNERLMFMY*FYFRDIHV--LLFLCVLLSAGVFLY*SFVFHEESFIIVNTQKTPEKVMPE 747
            L +L+ VGF+LG    +Q+  G  L  ++ +     + + I++L  D +LG ++R  H    S++Y L++                                      VLP T MS+WGLTVFSNI++T+P  G  + YW  G EFIN++TLLK+ VLHIVLP  L+              SSD+  DRFVFY ERL F   FY RD+ +  L+ +CVL    +  Y  FVFHEES++IV+  KT +K++PE
Sbjct:   25 LYRLYGVGFSLGFFILLQVICGLFLSWLFFSCFICVNWYFILFLW-DFDLGFIIRSVHICFTSLLYFLLYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPCTMMSYWGLTVFSNIIATVPVFGKWLCYWIWGSEFINDYTLLKLQVLHIVLPFMLIFILILHLFCLHYFMSSDAFCDRFVFYCERLCFCLWFYLRDLVLCFLILICVLYCILINWY--FVFHEESWLIVDVLKTSDKILPE 273          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11726.3567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2S7L5_9EUGL1.160e-13581.38Cytochrome b n=2 Tax=unclassified Perkinsela TaxID... [more]
A0A077ERL4_9TRYP6.090e-5443.28Cytochrome b n=6 Tax=Trypanosomatidae TaxID=5654 R... [more]
CYB_TRYBO6.830e-5040.80Cytochrome b n=1 Tax=Trypanoplasma borreli TaxID=5... [more]
CYB_LEITA4.040e-4839.36Cytochrome b n=122 Tax=Trypanosomatidae TaxID=5654... [more]
A0A120H2G7_9TRYP1.650e-4149.03Cytochrome b (Fragment) n=3 Tax=Trypanosomatidae T... [more]
A0A2Z2CNG4_LEIMA3.980e-4137.30Cytochrome b (Fragment) n=321 Tax=Leishmaniinae Ta... [more]
A0A173M8D5_LEIGU3.710e-4038.03Cytochrome b (Fragment) n=4 Tax=Viannia TaxID=3761... [more]
CYB_TRYBB5.640e-3736.14Cytochrome b n=7 Tax=Trypanosoma TaxID=5690 RepID=... [more]
A0A3G3MCM2_BODSA8.060e-3739.06Cytochrome b n=1 Tax=Bodo saltans TaxID=75058 RepI... [more]
A0A0E3J9X0_TRYVI5.190e-3536.90Cytochrome b n=1 Tax=Trypanosoma vivax TaxID=5699 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11726contigM-pyrifera_M_contig11726:2750..3496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size747
Cds size147
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11726.3567.1prot_M-pyrifera_M_contig11726.3567.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11726 2867..3013 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815689.8953488-UTR-M-pyrifera_M_contig11726:2749..28661622815689.8953488-UTR-M-pyrifera_M_contig11726:2749..2866Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11726 2750..2866 +
1692277523.332634-UTR-M-pyrifera_M_contig11726:2749..28661692277523.332634-UTR-M-pyrifera_M_contig11726:2749..2866Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11726 2750..2866 +
1622815689.9148946-UTR-M-pyrifera_M_contig11726:3013..34961622815689.9148946-UTR-M-pyrifera_M_contig11726:3013..3496Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11726 3014..3496 +
1692277523.3532522-UTR-M-pyrifera_M_contig11726:3013..34961692277523.3532522-UTR-M-pyrifera_M_contig11726:3013..3496Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11726 3014..3496 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815689.9052367-CDS-M-pyrifera_M_contig11726:2866..30131622815689.9052367-CDS-M-pyrifera_M_contig11726:2866..3013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11726 2867..3013 +
1692277523.3451152-CDS-M-pyrifera_M_contig11726:2866..30131692277523.3451152-CDS-M-pyrifera_M_contig11726:2866..3013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11726 2867..3013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11726.3567.1

>prot_M-pyrifera_M_contig11726.3567.1 ID=prot_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
MIMYLINDNELGSLLRLAHSSMASIIYLLIFTHMFKVMLYGLVFESAH*
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mRNA from alignment at M-pyrifera_M_contig11726:2750..3496+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11726.3567.1 ID=mRNA_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=747bp|location=Sequence derived from alignment at M-pyrifera_M_contig11726:2750..3496+ (Macrocystis pyrifera P11B4 male)
CTAGGATTGACTAAGCTCTTTAGTGTTGGTTTTAACCTTGGTATTTGTTG TGCCATTCAAATCGCACTTGGGTTTATGCTATGCTGAGTATATTCCAATA GTCTTAAAGATTCCTTTATGATTATGTATTTAATTAACGACAATGAGCTA GGATCTTTACTTCGTCTAGCCCATAGCAGCATGGCTAGTATCATTTACTT ATTAATATTTACTCATATGTTTAAAGTTATGCTTTATGGGCTAGTTTTTG AATCAGCCCATTGAGTATGACTAAGTGGATTCTGCATCTTTATGGTACTA ATCGTACTTACATTCTTGGGTTACGTCCTACCTATGACTCAAATGTCTTT TTGGGGGTTAACTGTTTTTAGTAATATACTATCTACTATCCCAGCCATTG GCAATCTGATGATTTATTGGTTTTGAGGCGGTGAATTTATTAATGAATTC ACCCTCCTCAAAGTGCACGTACTTCATATTGTGCTGCCCATGGCTCTCCT GGGTATGGTGATACTTCATATGTACATACTTCATCAGTACATTAGCTCGG ACTCTATTGACCGATTCGTTTTTTATAATGAGCGCCTCATGTTTATGTAT TGATTTTACTTTAGGGATATACATGTGTTGCTTTTCCTTTGCGTGCTATT GAGCGCTGGCGTTTTCTTATACTGAAGCTTCGTGTTCCATGAAGAGTCTT TCATTATCGTAAACACTCAGAAAACACCAGAAAAAGTTATGCCCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11726:2750..3496+

>mRNA_M-pyrifera_M_contig11726.3567.1 ID=mRNA_M-pyrifera_M_contig11726.3567.1|Name=mRNA_M-pyrifera_M_contig11726.3567.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig11726:2750..3496+ (Macrocystis pyrifera P11B4 male)
ATGATTATGTATTTAATTAACGACAATGAGCTAGGATCTTTACTTCGTCT
AGCCCATAGCAGCATGGCTAGTATCATTTACTTATTAATATTTACTCATA
TGTTTAAAGTTATGCTTTATGGGCTAGTTTTTGAATCAGCCCATTGAATG
ATTATGTATTTAATTAACGACAATGAGCTAGGATCTTTACTTCGTCTAGC
CCATAGCAGCATGGCTAGTATCATTTACTTATTAATATTTACTCATATGT
TTAAAGTTATGCTTTATGGGCTAGTTTTTGAATCAGCCCATTGA
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