prot_M-pyrifera_M_contig11719.3554.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig11719.3554.1
Unique Name	prot_M-pyrifera_M_contig11719.3554.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	108

Homology

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 3.760e-33
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  113 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 217

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.860e-31
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  112 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVP 216

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 4.430e-31
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  480 QFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 584

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.200e-31
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  502 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 606

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.320e-31
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  481 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 585

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.400e-31
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  488 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVP 592

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BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.120e-30
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:  431 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 535

[Close]

BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.720e-30
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFG AV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSGE RTI C SGV+QGD M P +FC  L P
Sbjct:   28 QFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVP 132

[Close]

BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.820e-30
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T +W+  TDCSNAFNT KRTA++ +  K VP L   +A+CY   PA   + MDSG  RTI C  GV+QGD M P +FC  L P
Sbjct:  203 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVP 307

[Close]

BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 3.040e-30
Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 0

Query:    1 QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEKCVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFCMALRP 105
            QFGVAV GGVE   + A+++H+T NW+  TDCSNAFNT KRTA++ +  K +P L   +A+CY   PA   + MDSGE RT+ C+SGV+QGD M P +F + L P
Sbjct:  651 QFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIP 755

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig11719.3554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4Y4_9PHAE	3.760e-33	54.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LL14_9PHAE	3.860e-31	54.29	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KKQ2_9PHAE	4.430e-31	54.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JI32_9PHAE	6.200e-31	54.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KMQ2_9PHAE	6.320e-31	54.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KA96_9PHAE	8.400e-31	54.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAK8_9PHAE	1.120e-30	54.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KYJ9_9PHAE	2.720e-30	53.33	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KR59_9PHAE	2.820e-30	52.38	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JH58_9PHAE	3.040e-30	52.38	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 19..104 e-value: 4.6E-8 score: 32.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig11719	contig	M-pyrifera_M_contig11719:4739..5062 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig11719.3554.1	mRNA_M-pyrifera_M_contig11719.3554.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig11719 4739..5062 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig11719.3554.1 ID=prot_M-pyrifera_M_contig11719.3554.1|Name=mRNA_M-pyrifera_M_contig11719.3554.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
QFGVAVPGGVEHARLRARMLHETDNWLALTDCSNAFNTVKRTAVLEEVEK
CVPALTPLVAKCYGTRPADVFFRMDSGETRTIACSSGVRQGDPMRPAMFC
MALRPGLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom