mRNA_M-pyrifera_M_contig117051.3518.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A0H2S3F1_9AGAM (Mitochondrial Rho GTPase n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2S3F1_9AGAM) HSP 1 Score: 103 bits (256), Expect = 9.910e-23 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKG-PLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGY-KGPMKEAIDVL-PGKRGSNVQREYRHTYQCFL 450
+L YGYG DL L ++YLHP D +L KG++FL + FE +D D+DG LNA E K+L+ TTP +P+ + P M T A+ A+T G LA W M T L +K T YL +LGY + P A+ V P K+ + R+ + C++
Sbjct: 273 ILWQYGYGMDLKLVEEYLHPKFDVPSDCSVELSQKGYQFLTDIFESYDKDQDGSLNATELKDLFSTTPGNPWIAQNFPSM--TIADDSGAVTLQGWLAQWSMTTLLDHKTTLAYLAYLGYGETPQTSALLVTQPRKKDRKKGKVTRNVFLCYV 423
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A4P9YD14_ROZAC (Mitochondrial Rho GTPase n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YD14_ROZAC) HSP 1 Score: 98.6 bits (244), Expect = 4.050e-21 Identity = 54/154 (35.06%), Postives = 84/154 (54.55%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKGPLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVLPGKRGSNVQREY----RHTYQCFL 450
+L +GYG DL+L D+LHP +D + +L PKG++F E F FD D+DG LN +E +++ P+ P+ G T+ + +T G LA W M T L Y T +YL +LGY+G +A+ V KR + ++ R+T C++
Sbjct: 269 VLRKFGYGDDLILRHDFLHPPLDVDDECCVELSPKGYQFFTELFYVFDKDKDGALNNEELNKMFSICPALPWDEHGQGSTVTNDQG--FLTLQGFLAHWSMTTLLDYGLTLEYLAYLGYEGDTTQAVKV---KRSRQIDKKKGRVTRNTLHCYV 417
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: G0V759_NAUCC (Mitochondrial Rho GTPase n=2 Tax=Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630) TaxID=1064592 RepID=G0V759_NAUCC) HSP 1 Score: 85.9 bits (211), Expect = 1.140e-16 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKGP-LMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVLPGKR 402
+L A+ Y L + L+P ++ + + +L PKG+RFL+E F RFD + DG LN +E + L+ TP P+ + T IT G LA W M T L YK T+ YL + GY+ +KE + V ++
Sbjct: 290 LLRAFHYTDSLCINDKVLYPKLNVPDTSSVELSPKGYRFLVELFRRFDKNNDGGLNEEELQFLFRRTPGLPYLWTATNFPFSTVVNNRGFITLQGWLAQWSMTTFLDYKITTAYLIYFGYEDDVKEVLHVTKARK 424
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: GEM1_SCHPO (Mitochondrial Rho GTPase 1 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=GEM1_SCHPO) HSP 1 Score: 83.2 bits (204), Expect = 9.850e-16 Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDP-FRFKGPLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGY----KGPMKEAIDVLPGKRGSN--VQREYRHTYQCFL 450
+L A+ Y L L YL P + G + +L PKG+RFL++ F +FD D DG LN +E L+ TP P T +T G LA W M T YK T YL +LG+ +G +A+ V+ + N V + R+ + CF+
Sbjct: 270 ILRAFHYTDSLSLDDSYLSPKFEVAPGQIVELSPKGYRFLVDLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWSMITLFDYKTTLAYLAYLGFDTDGRGHNTDALKVMRKRVSQNRKVSKYDRNVFLCFV 426
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: B6JZA2_SCHJY (Mitochondrial Rho GTPase n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JZA2_SCHJY) HSP 1 Score: 83.2 bits (204), Expect = 9.860e-16 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRF-KGPLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAI 381
+L A+ Y L L + YL+P +D G +L PKG+RFL++ F RFD D DG LN +E L+ TP P + + T+ +T G LA W M T YK T Y +LG+ ++++
Sbjct: 270 ILRAFHYTDSLSLDEGYLYPLLDVSSGQSVELSPKGYRFLVDLFYRFDRDNDGALNTKELAALFRFTPGLPETWIQSQFPNSTALNEHGCVTYNGWLAQWTMMTLFDYKTTLAYFAYLGFDSGTRQSV 397
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: G0WF11_NAUDC (Mitochondrial Rho GTPase n=1 Tax=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) TaxID=1071378 RepID=G0WF11_NAUDC) HSP 1 Score: 82.4 bits (202), Expect = 1.860e-15 Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKGPLMCETSAEAPEA--------ITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVLPGKRGSNVQREY-------RHTYQCFL 450
+L A+ Y L + L+P ++ E + +L PKG+RFL+E F RFD + DG L+ E +L++ TP P + T+ + P + IT G LA W M T L YK T+ YL + GY+ +K+ + + ++ + ++ R + CF+
Sbjct: 318 ILRAFHYTDSLCINDKILYPKLNVPETSSVELSPKGYRFLVELFRRFDKNNDGGLDENELIQLFKVTPGLPSLW-------TTTDFPSSTVLNNRGFITLQGWLAQWSMTTFLDYKITTAYLVYFGYEEDVKQVLHITKPRKFRRRKGKFYRSPINDRKVFNCFV 475
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A090KRH1_STRRB (Mitochondrial Rho GTPase n=2 Tax=Strongyloides TaxID=6247 RepID=A0A090KRH1_STRRB) HSP 1 Score: 81.6 bits (200), Expect = 3.410e-15 Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 1
Query: 4 LSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKGPLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVLPGKRGSNVQREYRHT----YQCFL 450
L YGY DL L +DY++P + G+ +L P+G++F+ + FE+FD D+D LLN E + P K + C S E IT G ++LW KT T + L +LG+ K +D L R + E + T +QC +
Sbjct: 302 LKKYGYSNDLQLREDYIYPTLKVPLGSSVELSPEGYQFISQLFEKFDEDKDCLLNPSEFQNCLSLYPRHLVWIKDAMQCVESDERGW-ITYNGFISLWTYKTLTDPPETLECLAYLGFNVKHKSQLDALIITRDRRIDIEEKETQRNVFQCHV 453
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A4C2E7S2_9SACH (Mitochondrial Rho GTPase n=4 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A4C2E7S2_9SACH) HSP 1 Score: 81.6 bits (200), Expect = 3.410e-15 Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRF-KGPLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVL-PGKRGSNVQREYRHT------YQCFL 450
+L A+ Y L + L+P + E + T+L PKG+RFL++ F RFD D DG LN E L+ TP P + + T IT G LA W M T L YK T+ YL + G++ + A+ + P + R YR + + CF+
Sbjct: 286 ILRAFQYTDSLSIMDKALYPKFNVPETSSTELSPKGYRFLVDLFLRFDRDNDGGLNEHELALLFRCTPGLPKLWSESNFPYSTVVNYRGCITLQGWLAQWSMTTFLDYKITTAYLVYFGFEEDARVALQITKPRRMRRRAGRLYRSSVADRKVFNCFI 443
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A1X7QZV5_9SACH (Mitochondrial Rho GTPase n=2 Tax=Kazachstania TaxID=71245 RepID=A0A1X7QZV5_9SACH) HSP 1 Score: 81.3 bits (199), Expect = 4.660e-15 Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKG---PLMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVLPGKR 402
ML + Y L L LHP ++ + + +L PKG+RFL++ F ++D D DG LN +E +++ TP P + PL + +IT G LA W M T L Y T++YL + GY+G + A+ + +R
Sbjct: 290 MLREFRYTDSLSLDDTILHPKLNIPDTSSVELSPKGYRFLVDLFLKYDKDNDGGLNDEELISMFQCTPGLPKLWSQTDFPLSSVVNNRG--SITLQGWLAQWSMTTFLDYSITTEYLIWFGYEGDTRLALQITKARR 424
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Match: A0A1S7H7X6_9SACH (Mitochondrial Rho GTPase n=2 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A1S7H7X6_9SACH) HSP 1 Score: 79.7 bits (195), Expect = 1.590e-14 Identity = 51/158 (32.28%), Postives = 75/158 (47.47%), Query Frame = 1
Query: 1 MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADRDGLLNAQEQKELYETTPSDPFRFKGP-LMCETSAEAPEAITEAGLLALWCMKTHLSYKFTSKYLRFLGYKGPMKEAIDVL-PGKRGSNVQREYRH------TYQCFL 450
+L A+ Y L + L P ++ + + +L PKG+RFL++ F RFD D DG LN E L++ TP P + T + IT G LA W M T L YK T+ YL + G++ + A+ + P K R YR + CF+
Sbjct: 287 ILRAFQYTDSLSIKDKALFPKLNVPDTSSIELSPKGYRFLVDLFLRFDKDNDGGLNDTELTFLFKCTPGQPKLWSETNFPYSTVVNSRGCITLQGWLAQWSMTTFLDYKITTAYLVYFGFQEDARLALQITKPRKMRRRAGRLYRSPLSDRKVFNCFI 444 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117051.3518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117051.3518.1 >prot_M-pyrifera_M_contig117051.3518.1 ID=prot_M-pyrifera_M_contig117051.3518.1|Name=mRNA_M-pyrifera_M_contig117051.3518.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp MLSAYGYGPDLLLAKDYLHPNIDFHEGNVTQLGPKGFRFLMEQFERFDADback to top mRNA from alignment at M-pyrifera_M_contig117051:3..555+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117051.3518.1 ID=mRNA_M-pyrifera_M_contig117051.3518.1|Name=mRNA_M-pyrifera_M_contig117051.3518.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=553bp|location=Sequence derived from alignment at M-pyrifera_M_contig117051:3..555+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117051:3..555+ >mRNA_M-pyrifera_M_contig117051.3518.1 ID=mRNA_M-pyrifera_M_contig117051.3518.1|Name=mRNA_M-pyrifera_M_contig117051.3518.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig117051:3..555+ (Macrocystis pyrifera P11B4 male)back to top |