mRNA_M-pyrifera_M_contig11705.3517.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: D7G7B3_ECTSI (1-aminocyclopropane-1-carboxylate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B3_ECTSI) HSP 1 Score: 113 bits (282), Expect = 5.500e-27 Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIMLERAAS 197
EAE RLWRQML+RT VNLTPG AFHC EPGWFRLCFAYQQ DVV+R+VDR+ADFL+ + ERAA+
Sbjct: 509 EAEERLWRQMLERTKVNLTPGGAFHCVEPGWFRLCFAYQQVDVVSRAVDRIADFLEALATERAAA 573
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A5K1BZM7_9MAGN (Aminotran_1_2 domain-containing protein (Fragment) n=5 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1BZM7_9MAGN) HSP 1 Score: 74.3 bits (181), Expect = 1.430e-13 Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFL 167
EAE RLW+++L + G+N++PG +FHCSEPGWFR+CFA + S++R+ FL
Sbjct: 225 EAETRLWKKLLHQVGLNVSPGSSFHCSEPGWFRVCFANMSEKTLAVSLERIRSFL 279
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A5J5ACS7_9ASTE (Aminotran_1_2 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5ACS7_9ASTE) HSP 1 Score: 73.2 bits (178), Expect = 5.910e-13 Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTI 176
EAE LW+++L G+N++PG +FHC+EPGWFR+CFA + + S+ R+ DF+ +I
Sbjct: 372 EAEMELWKKILCEVGLNISPGSSFHCTEPGWFRVCFANMSKETLKLSMQRIKDFVDSI 429
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: UPI00053A0148 (1-aminocyclopropane-1-carboxylate synthase-like protein 1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A0148) HSP 1 Score: 72.8 bits (177), Expect = 7.120e-13 Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFL 167
E+E LWR ++D+ +N++PG +FHCSEPGWFR+CFA D + ++R+ DF+
Sbjct: 273 ESEMALWRVIIDKVKINVSPGSSFHCSEPGWFRVCFANMDEDTLQTGLERIKDFV 327
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A2C9U0K1_MANES (Aminotran_1_2 domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9U0K1_MANES) HSP 1 Score: 72.8 bits (177), Expect = 8.000e-13 Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIMLERA 191
EAE LW+++L G+N++PG + HCSEPGWFR+CFA + + +++R+ DF +++ R+
Sbjct: 360 EAEKELWKKILSEVGLNISPGSSCHCSEPGWFRICFANMSAETLGVAMERIKDFAESVTSNRS 422
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: B9R6U5_RICCO (Acc synthase, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9R6U5_RICCO) HSP 1 Score: 72.4 bits (176), Expect = 1.100e-12 Identity = 25/59 (42.37%), Postives = 45/59 (76.27%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIM 179
EAE +W+++L + G+N++PG + HCSEPGWFR+CFA + +T +++R+ F+++I+
Sbjct: 363 EAEKEIWKKILGQVGLNISPGSSCHCSEPGWFRMCFANMSEETLTVAMERIKSFVESII 421
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A5K1GMK7_9MAGN (Aminotran_1_2 domain-containing protein (Fragment) n=5 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GMK7_9MAGN) HSP 1 Score: 71.6 bits (174), Expect = 1.370e-12 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIMLERAASLDGEGQEP 221
E E +LW +ML G+N++PG +FHCSEPGWFR+CFA V++ S+ R+ F++ S D +G+ P
Sbjct: 225 EGEMQLWMKMLHHVGINISPGSSFHCSEPGWFRVCFANMSEKVLSISLQRIKIFVKQ-------SRDKQGKAP 290
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A8J4RVD3_9ROSI (Aminotran_1_2 domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4RVD3_9ROSI) HSP 1 Score: 67.8 bits (164), Expect = 1.720e-12 Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQ 170
E+E LWR +++ +N++PG +FHCSEPGWFR+CFA D V +++R+ F++
Sbjct: 13 ESEMNLWRLIMNEVKLNVSPGSSFHCSEPGWFRVCFANMDDDTVEVALERIRVFVE 68
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A835DRH8_9MAGN (Aminotran_1_2 domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DRH8_9MAGN) HSP 1 Score: 71.6 bits (174), Expect = 2.060e-12 Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTI 176
EAE LW+++L G+N++PG + HC+EPGWFR+CFA D + S+ R+ F+Q+I
Sbjct: 374 EAEMELWKKVLYEVGLNISPGSSCHCTEPGWFRVCFANMSEDTLNLSMQRIKSFVQSI 431
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Match: A0A022Q458_ERYGU (Aminotran_1_2 domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q458_ERYGU) HSP 1 Score: 71.6 bits (174), Expect = 2.070e-12 Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 3
Query: 3 EAEARLWRQMLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIMLER 188
EAEA LWR +++ +N++PG FHCSEPGWFR+CFA + V +++R+ +F+ + ++
Sbjct: 373 EAEAELWRMIIEDVKINVSPGAPFHCSEPGWFRVCFANMDDEAVRVAINRIHEFVMIVQTKK 434 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11705.3517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11705.3517.1 >prot_M-pyrifera_M_contig11705.3517.1 ID=prot_M-pyrifera_M_contig11705.3517.1|Name=mRNA_M-pyrifera_M_contig11705.3517.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp MLDRTGVNLTPGDAFHCSEPGWFRLCFAYQQTDVVTRSVDRVADFLQTIMback to top mRNA from alignment at M-pyrifera_M_contig11705:5551..6167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11705.3517.1 ID=mRNA_M-pyrifera_M_contig11705.3517.1|Name=mRNA_M-pyrifera_M_contig11705.3517.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=617bp|location=Sequence derived from alignment at M-pyrifera_M_contig11705:5551..6167- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11705:5551..6167- >mRNA_M-pyrifera_M_contig11705.3517.1 ID=mRNA_M-pyrifera_M_contig11705.3517.1|Name=mRNA_M-pyrifera_M_contig11705.3517.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig11705:5551..6167- (Macrocystis pyrifera P11B4 male)back to top |