mRNA_M-pyrifera_M_contig116924.3502.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116924.3502.1
Unique NamemRNA_M-pyrifera_M_contig116924.3502.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A517PRB2_9PLAN (Serine/threonine-protein kinase pkn1 n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517PRB2_9PLAN)

HSP 1 Score: 290 bits (742), Expect = 1.890e-97
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCEQD 387
            EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCEQD
Sbjct:  160 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCEQD 288          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A517PYK8_9PLAN (Serine/threonine-protein kinase pkn1 n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PYK8_9PLAN)

HSP 1 Score: 166 bits (420), Expect = 2.170e-48
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCE 381
            EYACRAGSTT + FG D  HLGDYAWY +N  ++D+ Y H+ G+KKAN FGLYDMHGNV+EWC DWY EDYY KSP ADP GPS G   + RGGSWY      RSA R    P     + GFR+VCE
Sbjct:  183 EYACRAGSTTMFSFGEDFNHLGDYAWYSKNALNIDKRYVHRVGLKKANAFGLYDMHGNVWEWCSDWYSEDYYGKSPTADPGGPSYGYTRVLRGGSWYRGAEESRSASRRSFDPEMGASSYGFRIVCE 309          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A7Z9LYQ7_9PLAN (Formylglycine-generating enzyme family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9LYQ7_9PLAN)

HSP 1 Score: 152 bits (384), Expect = 2.320e-43
Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNV--GFRVVCEQD 387
            EYACRAG+ T + FG D+  LGDYAW+++N  D+ E YAHQ G+KK N FGLYDMHGNV+EWC D++ EDYY++S   DP G ++G+F + RGGSWY   R  RSAYR+    G RN  +  GFR+V E D
Sbjct:  147 EYACRAGTETAWGFGDDEASLGDYAWHNKNASDIGERYAHQVGLKKPNAFGLYDMHGNVWEWCYDYFGEDYYKQSLEKDPTGATSGSFHVLRGGSWYFLTRDTRSAYRNRNDGGARNNPIIFGFRLVRELD 277          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A2G6PI91_9BACT (FGE-sulfatase domain-containing protein n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A2G6PI91_9BACT)

HSP 1 Score: 154 bits (390), Expect = 3.160e-43
Identity = 73/126 (57.94%), Postives = 86/126 (68.25%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVC 378
            EYACRAGST ++CFG D+  LGDYAWY  N   V     H    KKAN +GL+DMHGNV+EWC DWYDE+YY+ SP  DP GP+AGA  + RGGSWY  P  CRSA R+G  P   N  +GFR+V 
Sbjct:  252 EYACRAGSTGRFCFGDDEAQLGDYAWYGANANGV----THAVAGKKANAWGLFDMHGNVWEWCSDWYDEEYYKASPLKDPAGPAAGALRVLRGGSWYFEPWNCRSASRAGSDPRNWNDGLGFRLVA 373          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A3L7NFZ3_9BACT (Formylglycine-generating enzyme family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NFZ3_9BACT)

HSP 1 Score: 147 bits (372), Expect = 5.380e-42
Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCEQ 384
            EYACRAG+TT Y FG D+K LG+YAW++ N+ +VDE YAH+ G+KK N +GL+DMHGN +EWC DW+D+   + S   DP GP  G+  + RGG W   P  CRSAYRS   P +RN ++GFRV   Q
Sbjct:  112 EYACRAGTTTAYSFGDDEKQLGEYAWFNGNSENVDEKYAHKFGLKKPNPWGLHDMHGNAWEWCSDWHDK---KLSGGVDPIGPGGGSSRVLRGGGWRDRPGFCRSAYRSSIGPSFRNSSLGFRVARSQ 236          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A7X3TBX1_9BACT (Formylglycine-generating enzyme family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X3TBX1_9BACT)

HSP 1 Score: 145 bits (366), Expect = 5.510e-41
Identity = 69/125 (55.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVV 375
            EYACRAGS T++ FG D+  LGDYAWY +N +DV E YAH  G K  N +GLYDMHGNV+EW +DWY  DYY+ SP  DP+GPS+G+  + RGGS+       RSA RSG  PG R  ++G R++
Sbjct:  119 EYACRAGSRTRWSFGDDESVLGDYAWYWDNAWDVGEEYAHAVGTKWPNAWGLYDMHGNVYEWVQDWYGSDYYDVSPRVDPRGPSSGSLRVGRGGSFVDGASDLRSADRSGFSPGGRGDDIGVRLL 243          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A2E4M8R7_9BACT (Sulphatase-modifying factor protein n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2E4M8R7_9BACT)

HSP 1 Score: 145 bits (367), Expect = 6.770e-41
Identity = 73/130 (56.15%), Postives = 90/130 (69.23%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYD-VDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVCEQD 387
            EYACRAG+ T + FG D+K LGDYAW  EN  + V E YAHQ  +KK N FGLYDMHGNV EWC D+Y++DYY +SP  +P GP++G+F ++RGGSW    R  RSA+R      YR  + GFRVV E D
Sbjct:  140 EYACRAGTQTTWNFGDDEKALGDYAWSVENAAEIVSEQYAHQVRLKKPNAFGLYDMHGNVCEWCHDYYEKDYYRQSPEKNPTGPTSGSFRVWRGGSWDDGTRDSRSAFRDWDGAVYRYNSRGFRVVRELD 269          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: B4S9Q3_PROA2 (FGE-sulfatase domain-containing protein n=2 Tax=Prosthecochloris aestuarii TaxID=1102 RepID=B4S9Q3_PROA2)

HSP 1 Score: 146 bits (368), Expect = 8.780e-41
Identity = 67/125 (53.60%), Postives = 85/125 (68.00%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVV 375
            EYA RAG+TT+Y +G  +   G+YAWYD+N YDV   YAH  G+K  N +GLYDMHGNV+EW +DWY E+YY  SP  DP+GPS+G + + RGG W    R  RSA R    PG R+  +GFR+V
Sbjct:  166 EYAARAGTTTRYSWGNSESQAGEYAWYDKNAYDVGRSYAHGVGIKMPNPWGLYDMHGNVWEWVQDWYGENYYRNSPMNDPKGPSSGRYRVNRGGGWDYVARNLRSANRGNNSPGSRDDVLGFRLV 290          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A2E7LG48_9PLAN (FGE-sulfatase domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7LG48_9PLAN)

HSP 1 Score: 142 bits (359), Expect = 4.060e-40
Identity = 68/126 (53.97%), Postives = 80/126 (63.49%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVVC 378
            EYACRAG+TT Y FG +D  LG+YAWY ENT D  + YAH  G KK N++GLYDMHGNV+EWC DWY    Y      DP GP++G+  + RGGSW       RS+ R G  P  R   VGFRV C
Sbjct:  104 EYACRAGTTTAYSFGDNDSELGEYAWYTENTRDAGQKYAHTVGRKKPNRWGLYDMHGNVWEWCSDWYGA--YPSGDATDPTGPNSGSRRVLRGGSWSSLAGFWRSSLRYGRRPSSRGNRVGFRVTC 227          
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Match: A0A518B172_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B172_9BACT)

HSP 1 Score: 150 bits (379), Expect = 5.120e-40
Identity = 70/125 (56.00%), Postives = 81/125 (64.80%), Query Frame = 1
Query:    1 EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQFGLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFPRICRSAYRSGGPPGYRNFNVGFRVV 375
            EYACR G+TT+Y FG     L  YAW+ +NT+ + E YAH  G KKAN FGLYDMHGNV+EWC DWY E +Y  SP +DP GP  G   + RGGSW      CR A R G  PGYR F +GFRV 
Sbjct:  502 EYACRGGTTTEYAFGDSASDLSAYAWFRDNTWGIGEGYAHPVGQKKANGFGLYDMHGNVWEWCADWYGESFYTASPTSDPSGPPKGLIRVNRGGSWSNSAWDCRCADRYGNSPGYRLFYLGFRVA 626          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116924.3502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PRB2_9PLAN1.890e-97100.00Serine/threonine-protein kinase pkn1 n=3 Tax=Gimes... [more]
A0A517PYK8_9PLAN2.170e-4860.63Serine/threonine-protein kinase pkn1 n=4 Tax=Gimes... [more]
A0A7Z9LYQ7_9PLAN2.320e-4355.73Formylglycine-generating enzyme family protein n=1... [more]
A0A2G6PI91_9BACT3.160e-4357.94FGE-sulfatase domain-containing protein n=1 Tax=Ba... [more]
A0A3L7NFZ3_9BACT5.380e-4253.91Formylglycine-generating enzyme family protein n=1... [more]
A0A7X3TBX1_9BACT5.510e-4155.20Formylglycine-generating enzyme family protein n=2... [more]
A0A2E4M8R7_9BACT6.770e-4156.15Sulphatase-modifying factor protein n=1 Tax=Rhodop... [more]
B4S9Q3_PROA28.780e-4153.60FGE-sulfatase domain-containing protein n=2 Tax=Pr... [more]
A0A2E7LG48_9PLAN4.060e-4053.97FGE-sulfatase domain-containing protein n=1 Tax=Pl... [more]
A0A518B172_9BACT5.120e-4056.00Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116924contigM-pyrifera_M_contig116924:5..394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score149.8
Seed ortholog evalue8.6e-34
Seed eggNOG ortholog290512.Paes_2390
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfatase-modifying factor enzyme 1
EggNOG OGs1FF87@1090,COG1262@1,COG1262@2
COG Functional cat.O
Best tax levelChlorobi
Best eggNOG OGNA|NA|NA
Exons1
Model size390
Cds size390
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.322817-CDS-M-pyrifera_M_contig116924:4..3941622815686.322817-CDS-M-pyrifera_M_contig116924:4..394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116924 5..394 +
1692277521.511201-CDS-M-pyrifera_M_contig116924:4..3941692277521.511201-CDS-M-pyrifera_M_contig116924:4..394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116924 5..394 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116924.3502.1prot_M-pyrifera_M_contig116924.3502.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116924 5..394 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116924.3502.1

>prot_M-pyrifera_M_contig116924.3502.1 ID=prot_M-pyrifera_M_contig116924.3502.1|Name=mRNA_M-pyrifera_M_contig116924.3502.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
EYACRAGSTTKYCFGADDKHLGDYAWYDENTYDVDEYYAHQAGVKKANQF
GLYDMHGNVFEWCRDWYDEDYYEKSPPADPQGPSAGAFPIFRGGSWYGFP
RICRSAYRSGGPPGYRNFNVGFRVVCEQD*
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mRNA from alignment at M-pyrifera_M_contig116924:5..394+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116924.3502.1 ID=mRNA_M-pyrifera_M_contig116924.3502.1|Name=mRNA_M-pyrifera_M_contig116924.3502.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig116924:5..394+ (Macrocystis pyrifera P11B4 male)
GAATATGCGTGTCGAGCCGGCTCCACAACGAAATATTGTTTCGGGGCGGA CGACAAGCACCTCGGAGATTATGCCTGGTATGATGAAAACACATACGATG TCGACGAGTATTACGCACATCAGGCAGGTGTGAAGAAAGCAAACCAGTTT GGTCTGTACGACATGCATGGAAACGTATTCGAGTGGTGTCGAGACTGGTA TGATGAAGATTACTATGAAAAATCTCCGCCCGCAGATCCACAGGGGCCTT CCGCTGGCGCTTTCCCCATTTTCCGGGGCGGCTCCTGGTATGGTTTCCCG CGGATCTGCCGTTCTGCCTACCGCAGTGGAGGCCCACCCGGTTATCGAAA CTTCAACGTGGGTTTTCGAGTCGTCTGTGAGCAGGATTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116924:5..394+

>mRNA_M-pyrifera_M_contig116924.3502.1 ID=mRNA_M-pyrifera_M_contig116924.3502.1|Name=mRNA_M-pyrifera_M_contig116924.3502.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig116924:5..394+ (Macrocystis pyrifera P11B4 male)
GAATATGCGTGTCGAGCCGGCTCCACAACGAAATATTGTTTCGGGGCGGA
CGACAAGCACCTCGGAGATTATGCCTGGTATGATGAAAACACATACGATG
TCGACGAGTATTACGCACATCAGGCAGGTGTGAAGAAAGCAAACCAGTTT
GGTCTGTACGACATGCATGGAAACGTATTCGAGTGGTGTCGAGACTGGTA
TGATGAAGATTACTATGAAAAATCTCCGCCCGCAGATCCACAGGGGCCTT
CCGCTGGCGCTTTCCCCATTTTCCGGGGCGGCTCCTGGTATGGTTTCCCG
CGGATCTGCCGTTCTGCCTACCGCAGTGGAGGCCCACCCGGTTATCGAAA
CTTCAACGTGGGTTTTCGAGTCGTCTGTGAGCAGGATTAAGAATATGCGT
GTCGAGCCGGCTCCACAACGAAATATTGTTTCGGGGCGGACGACAAGCAC
CTCGGAGATTATGCCTGGTATGATGAAAACACATACGATGTCGACGAGTA
TTACGCACATCAGGCAGGTGTGAAGAAAGCAAACCAGTTTGGTCTGTACG
ACATGCATGGAAACGTATTCGAGTGGTGTCGAGACTGGTATGATGAAGAT
TACTATGAAAAATCTCCGCCCGCAGATCCACAGGGGCCTTCCGCTGGCGC
TTTCCCCATTTTCCGGGGCGGCTCCTGGTATGGTTTCCCGCGGATCTGCC
GTTCTGCCTACCGCAGTGGAGGCCCACCCGGTTATCGAAACTTCAACGTG
GGTTTTCGAGTCGTCTGTGAGCAGGATTAA
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