prot_M-pyrifera_M_contig116910.3499.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116910.3499.1
Unique Nameprot_M-pyrifera_M_contig116910.3499.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A7K1BC84_9ACTN (ABC transporter permease n=2 Tax=root TaxID=1 RepID=A0A7K1BC84_9ACTN)

HSP 1 Score: 230 bits (586), Expect = 6.130e-73
Identity = 118/160 (73.75%), Postives = 136/160 (85.00%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFD 160
            PLTY+SF I P  W++L R+  GLR+R+AGERP VLS+MG     +RWLA+ +GGGLAG+GGAQLATAFARTW+E+MVAGRGFIAVALVIFA WNPLL + GAYLFSGAVA QLELQAR  DVSIF+LDAIPY+VVLVVLA +SRRRR A PE+L SVFD
Sbjct:  139 PLTYLSFLIAPLAWWFLFRSATGLRIRAAGERPIVLSSMGIDHRPVRWLAVGIGGGLAGLGGAQLATAFARTWAENMVAGRGFIAVALVIFAAWNPLLIVLGAYLFSGAVAFQLELQARNVDVSIFLLDAIPYLVVLVVLALMSRRRRHAAPESLSSVFD 298          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: UPI001E624235 (ABC transporter permease n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E624235)

HSP 1 Score: 197 bits (502), Expect = 3.080e-60
Identity = 102/160 (63.75%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFD 160
            PLTY+S      +W+ +  T  GL+LR+AGERPEVL   G+SP  +R   +  GG LAG+GGAQLATAF R WSE MVAGRGF+AV LVIFA WNPL  IAGAYLFSGAVALQLELQA+G++VS ++L A+PY+VV+ VL ALSRRRR A P AL+ VF+
Sbjct:  139 PLTYLSVVAAAGLWWMMRSTSAGLKLRAAGERPEVLEVYGSSPRSVRVFGVLAGGALAGLGGAQLATAFTRNWSEGMVAGRGFVAVGLVIFAAWNPLKAIAGAYLFSGAVALQLELQAQGSEVSRYLLQALPYLVVIAVLVALSRRRRHAAPAALQRVFE 298          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A1Q7BUX3_9ACTN (ABC transporter permease n=1 Tax=Actinobacteria bacterium 13_2_20CM_2_71_6 TaxID=1803494 RepID=A0A1Q7BUX3_9ACTN)

HSP 1 Score: 177 bits (449), Expect = 3.440e-52
Identity = 92/164 (56.10%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPS 164
            PLTY+S+ + PA+W+ L+R+  GL +R+ GERPEVL   G +P  +R+LA+  GG LAG+GGAQL+TA+A TW E+M AGRGFIAVALVIFA W+PL  + GAYLF  A+AL   LQARG   + F LDA+PYVV +  L  L RRR  A PE+L  VF++ P+
Sbjct:  142 PLTYLSYLLAPAMWWLLYRSRWGLLVRATGERPEVLRAYGRNPGAVRYLAVIGGGLLAGIGGAQLSTAYANTWFENMTAGRGFIAVALVIFAAWHPLRAVGGAYLFGAALALSPALQARGIGFNQFALDALPYVVTIAALILLGRRRSNAAPESLSQVFEMTPA 305          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A6V8LIB3_9ACTN (ABC transporter permease n=1 Tax=Phytohabitans rumicis TaxID=1076125 RepID=A0A6V8LIB3_9ACTN)

HSP 1 Score: 176 bits (445), Expect = 1.300e-51
Identity = 92/164 (56.10%), Postives = 118/164 (71.95%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPS 164
            PL YVS+ + PA+W+ L R+  G+ +R+AGERPEVLST G SP  +R+LA+  GG LAG+GGA L+TA+A  W E+M AGRGFIAVALVIFA W+PL  + GAYLF  A+AL   LQARG   + F+LDA+PY+V +  L  L RRR  + PE L  VFD+ P+
Sbjct:  140 PLVYVSYLLAPALWWLLFRSRWGIVVRAAGERPEVLSTYGHSPVLVRYLAVVGGGLLAGIGGAHLSTAYANAWFENMTAGRGFIAVALVIFAAWHPLRAVGGAYLFGAALALSPALQARGYGFNQFVLDALPYLVTIAALIVLGRRRVNSAPEGLSRVFDLTPT 303          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A6F8YVH3_9ACTN (Uncharacterized protein n=1 Tax=Phytohabitans suffuscus TaxID=624315 RepID=A0A6F8YVH3_9ACTN)

HSP 1 Score: 170 bits (431), Expect = 8.680e-51
Identity = 93/164 (56.71%), Postives = 112/164 (68.29%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPS 164
            PL Y S+ + PA+W  L R+  GL LR AGERP VL+T G SP  +R+LA+A GG LAGVGGA L+TA+A  W E M AGRGFIAVALVIFA W+PL  + GAYLF  A+AL   LQARG   + F LDA+PY+V +  L  L RRR  A PE L  VF + P+
Sbjct:   37 PLVYASYLLAPALWLLLFRSRWGLVLRGAGERPAVLATYGHSPLLVRYLAVAGGGLLAGVGGAHLSTAYANAWFESMTAGRGFIAVALVIFAAWHPLRAVGGAYLFGAALALSPALQARGYGFNQFALDALPYLVTIAALVVLGRRRTNAAPEDLTRVFQLTPT 200          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A538D5Q0_9ACTN (ABC transporter permease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D5Q0_9ACTN)

HSP 1 Score: 170 bits (431), Expect = 1.700e-49
Identity = 88/165 (53.33%), Postives = 117/165 (70.91%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPSA 165
            PL YVS+F  PAVW+ L+RT  GL LR+AGE+P+ LS  G SP+ +R +A+A  G LAG+GGAQL+TA+A  W E+M  GRGFIAVALVIFA W+P+  + GAYLF  A++L   LQARG  ++ F LD +PYV+ L  L    R+R    PE L++VF++ PS+
Sbjct:  141 PLVYVSYFAAPAVWWLLYRTRAGLLLRAAGEQPDALSAYGYSPDLVRIIAVAASGMLAGIGGAQLSTAYANAWFENMTQGRGFIAVALVIFAAWDPIKAVGGAYLFGAALSLAPALQARGYRLNQFALDVLPYVLTLFALVLFGRKRVDNAPEGLKAVFELAPSS 305          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: UPI002010C273 (ABC transporter permease n=1 Tax=Sphaerisporangium sp. NEAU-ZS1 TaxID=2935860 RepID=UPI002010C273)

HSP 1 Score: 170 bits (430), Expect = 2.350e-49
Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPS 164
            P+TY+SF   PA+W+WL  T  GL LR+AGER +VL   G  P  +R  A+  GG LAG+GGAQL+TA+A  W E M AGRGFIAVALVIFA W P+  +AG+YLF  A+AL   LQARG  ++ F LDA+P+V+ LV+LA L +R   A PE L  VF+  PS
Sbjct:  140 PVTYLSFVAAPALWWWLRNTKGGLLLRTAGERADVLHVHGYRPGLIRGRAVVAGGALAGIGGAQLSTAYAHAWFEGMTAGRGFIAVALVIFAAWRPIWVMAGSYLFGAALALAPALQARGYALNQFALDALPFVITLVILAVLGKRTLRAAPEELRRVFESAPS 303          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: E3JB84_FRAIE (Inner-membrane translocator n=7 Tax=Frankia TaxID=1854 RepID=E3JB84_FRAIE)

HSP 1 Score: 170 bits (430), Expect = 2.410e-49
Identity = 88/162 (54.32%), Postives = 118/162 (72.84%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQ 162
            PLTY+S+F+ PAVW+ L+R+ VGL +R+AGE  EVL   G S   +R++++ VGGGL G+GGAQL+ A++  W E+M  GRGFIAVALVIFA WNPL  +AG+YLF  A+AL   LQARG  ++ F LDAIP+VV ++VLA L +R   A P+ L  VF+ +
Sbjct:  142 PLTYLSYFVAPAVWWVLYRSRVGLLVRTAGEHSEVLLVHGYSTSAVRYVSVIVGGGLCGLGGAQLSIAYSNAWFENMTVGRGFIAVALVIFATWNPLRVMAGSYLFGAALALSPALQARGYGINQFALDAIPFVVTILVLAILGKRTLLAAPDELRRVFETR 303          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: A0A3N1AZL6_9ACTN (Nucleoside ABC transporter membrane protein n=1 Tax=Micromonospora sp. Llam0 TaxID=2485143 RepID=A0A3N1AZL6_9ACTN)

HSP 1 Score: 169 bits (427), Expect = 7.360e-49
Identity = 91/169 (53.85%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRR-----RFAMPEALESVFDVQPS 164
            PL Y S+ + PA+W+ L+R+  GL +R AGER EVL+  G SP+ +R+LA+  GG LAGVGGA L+TA+A  W E+M AGRGFIAVALVIFA W+PL  + GAYLF  A+AL   LQARG   + F LDA+PY+V +  L  L RRR     R A PE L  VF++ P+
Sbjct:  139 PLVYGSYLLAPAIWWLLYRSRPGLTIRGAGERGEVLTAYGHSPQLVRYLAVVTGGLLAGVGGAHLSTAYANAWFENMTAGRGFIAVALVIFAAWHPLRAVGGAYLFGAALALSPALQARGLGFNQFALDALPYLVTIAALVLLGRRRSNAAPRRAAPEGLSRVFELTPA 307          
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Match: UPI00194436E8 (ABC transporter permease n=1 Tax=Actinoplanes rishiriensis TaxID=1050105 RepID=UPI00194436E8)

HSP 1 Score: 168 bits (426), Expect = 9.360e-49
Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    1 PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLALAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTIAGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFAMPEALESVFDVQPS 164
            PL Y S+ + PA+W+ L R+  GL +R AGERP  L+T G SP  +R+LA+  GG LAG+GGA L+TA+A  W E+M AGRGFIAVALVIFA W+PL  + GAYLF  A+AL   LQARG   + F LDA+PY+V +  L  L RRR  A PE L  VFD+ P+
Sbjct:  140 PLVYASYLLAPALWWLLFRSRWGLVVRGAGERPAALATYGHSPVLVRYLAVVGGGLLAGIGGAHLSTAYANAWFENMTAGRGFIAVALVIFAAWHPLRAVGGAYLFGAALALSPALQARGFGFNQFALDALPYLVTIAALIVLGRRRVNAAPEDLSRVFDLTPA 303          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116910.3499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1BC84_9ACTN6.130e-7373.75ABC transporter permease n=2 Tax=root TaxID=1 RepI... [more]
UPI001E6242353.080e-6063.75ABC transporter permease n=1 Tax=Rhabdothermincola... [more]
A0A1Q7BUX3_9ACTN3.440e-5256.10ABC transporter permease n=1 Tax=Actinobacteria ba... [more]
A0A6V8LIB3_9ACTN1.300e-5156.10ABC transporter permease n=1 Tax=Phytohabitans rum... [more]
A0A6F8YVH3_9ACTN8.680e-5156.71Uncharacterized protein n=1 Tax=Phytohabitans suff... [more]
A0A538D5Q0_9ACTN1.700e-4953.33ABC transporter permease n=1 Tax=Actinomycetia bac... [more]
UPI002010C2732.350e-4954.88ABC transporter permease n=1 Tax=Sphaerisporangium... [more]
E3JB84_FRAIE2.410e-4954.32Inner-membrane translocator n=7 Tax=Frankia TaxID=... [more]
A0A3N1AZL6_9ACTN7.360e-4953.85Nucleoside ABC transporter membrane protein n=1 Ta... [more]
UPI00194436E89.360e-4954.88ABC transporter permease n=1 Tax=Actinoplanes rish... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001851ABC transporter, permeasePFAMPF02653BPD_transp_2coord: 6..121
e-value: 7.0E-17
score: 61.5
NoneNo IPR availablePANTHERPTHR43370FAMILY NOT NAMEDcoord: 1..159
NoneNo IPR availablePANTHERPTHR43370:SF2coord: 1..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..81
NoneNo IPR availableTMHMMTMhelixcoord: 125..144
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116910contigM-pyrifera_M_contig116910:2..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116910.3499.1mRNA_M-pyrifera_M_contig116910.3499.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116910 2..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116910.3499.1 ID=prot_M-pyrifera_M_contig116910.3499.1|Name=mRNA_M-pyrifera_M_contig116910.3499.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
PLTYVSFFIVPAVWFWLHRTGVGLRLRSAGERPEVLSTMGTSPERLRWLA
LAVGGGLAGVGGAQLATAFARTWSEDMVAGRGFIAVALVIFAGWNPLLTI
AGAYLFSGAVALQLELQARGTDVSIFILDAIPYVVVLVVLAALSRRRRFA
MPEALESVFDVQPSAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001851ABC_transp_permease