mRNA_M-pyrifera_M_contig101687.350.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A831RW89_9GAMM (C-type cytochrome n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A831RW89_9GAMM) HSP 1 Score: 210 bits (535), Expect = 2.990e-66 Identity = 107/189 (56.61%), Postives = 135/189 (71.43%), Query Frame = 1 Query: 19 LAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAA---GGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 L A ++G+AAET A D RGA SW+ NC+RCHNMR P+EFRD+LWR I+THMR+RAGLTGQQ RDILAF+QASN P VA+ + PV G +Y TC+ CHGADGKG +PG PDFT G L+KSD+VLL+HI EGF+SP + M MPA+GGNP+LT +E++ L+++R FSR Sbjct: 12 LLAPAVGSAAETN-DKAGDANRGATSWSQNCNRCHNMRSPTEFRDELWRTIITHMRLRAGLTGQQQRDILAFMQASN------NPAPVASVSVAEPVTGGTKRSGEQIYGSTCIACHGADGKGVLPGTPDFTDKGGRLSKSDEVLLRHITEGFQSPGSPMAMPAKGGNPSLTPSEISEVLSYLRKQFSR 193
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A2G2HT17_9GAMM (Cytochrome c domain-containing protein n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2G2HT17_9GAMM) HSP 1 Score: 192 bits (488), Expect = 3.940e-59 Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 1 Query: 73 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATT--TANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 D RGA SWA NCSRCH MRDP EF D +WRPI+ HMR+R GLTGQQ RDIL FLQASN + P KVA ++ + G Y+QTC+ CHGA GKG +PGVPD T ADG L+KSD+VL++HI EGF++P + M MPA+GGN L DA++ + L+++R +F + Sbjct: 27 DISRGAISWAQNCSRCHEMRDPKEFTDAMWRPIVAHMRVRGGLTGQQQRDILVFLQASN----NPTPKKVANNLKVSDSSKPSQSGKATYSQTCIACHGAAGKGVLPGVPDLTKADGRLSKSDEVLIKHIAEGFQTPGSPMAMPAKGGNADLNDADIKSVLSYLRESFGQ 192
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: S5TFL9_9GAMM (Cytochrome c, class I n=1 Tax=Cycloclasticus zancles 78-ME TaxID=1198232 RepID=S5TFL9_9GAMM) HSP 1 Score: 190 bits (483), Expect = 3.980e-58 Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 67 AADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPV------DAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFS 573 A D RG+++W++NC RCH+MR P+E RDD W+ + HMR+RAGLTGQ+TRDILAFLQASN +SA TTT P + A G +Y C+ CHGA+GKGA+PGVPDFT G LTK+D LL +II GF+SP + M MPARGGN +L+DAEL+A L +IR FS Sbjct: 40 AGDFSRGSKAWSENCMRCHSMRSPTELRDDQWKTTVFHMRVRAGLTGQETRDILAFLQASNAPISSAN-----TTTVKPTIKKVASSSAISGEKIYQSNCMACHGANGKGALPGVPDFTNKMGPLTKTDAQLLNNIINGFQSPNSSMQMPARGGNSSLSDAELSAALGYIRETFS 209
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI00048BB29C (c-type cytochrome n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI00048BB29C) HSP 1 Score: 189 bits (479), Expect = 1.330e-57 Identity = 96/175 (54.86%), Postives = 117/175 (66.86%), Query Frame = 1 Query: 64 DAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASN----YRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 D A RGA +WA++C RCHNMR+P+EFRDD WR IM HMR+RAGLTGQ+TRDILAFLQASN A P+ A TT P G VY QTC+ CHGADGKGA+PGVPD T A+G L KSD L++ I G + P A + MP +GGNP LT+ ++ L ++R F R Sbjct: 35 DTASVARGAVAWANSCDRCHNMREPAEFRDDQWRAIMAHMRVRAGLTGQETRDILAFLQASNSPAQQPSAPVAPIPTAPTTGVHP-----GKAVYTQTCLACHGADGKGALPGVPDLTRANGPLAKSDAELIRSITAGVQRPGAPLAMPPKGGNPNLTETDIRQVLDYMRQAFGR 204
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A2K9B1P9_9GAMM (Cytochrome c domain-containing protein n=1 Tax=Kangiella profundi TaxID=1561924 RepID=A0A2K9B1P9_9GAMM) HSP 1 Score: 188 bits (478), Expect = 1.660e-57 Identity = 91/170 (53.53%), Postives = 115/170 (67.65%), Query Frame = 1 Query: 73 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGAS--ARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 D ++GAQ WADNC+RCHNMRDP E D+ W + HMR+RAGLTGQ RDILAFLQASN ++PV + N G VY +C+ CHG+DGKGA+PG PDFT A G L K+D+ LL ++I GF+SP + M MP RGGN +LTDA++ A L +IRA F + Sbjct: 36 DAVKGAQKWADNCARCHNMRDPKELSDEYWETTVNHMRIRAGLTGQDARDILAFLQASNTPPEKEISKPVSI-----NQISSKLSGEEVYKSSCIACHGSDGKGALPGTPDFTNAKGPLNKNDEELLSNMINGFQSPGSPMAMPPRGGNASLTDADVKAVLGYIRATFGK 200
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A127M573_9GAMM (Cytochrome c domain-containing protein n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A127M573_9GAMM) HSP 1 Score: 187 bits (475), Expect = 4.740e-57 Identity = 98/188 (52.13%), Postives = 120/188 (63.83%), Query Frame = 1 Query: 13 LTLAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 L L+A + A A GDA +GAQ WADNC+RCHNMRDP E DD W + HMR+RAGL GQ TRDILAFLQASN V+ AN + G VY TC+ CHG DGKGA PG+PDFT + G L+K+D LL ++I GF+SP + M MP RGGN +LTDA+L A L ++R F + Sbjct: 19 LLLSATFLTPALAEAKGDAG---KGAQKWADNCARCHNMRDPKELSDDYWETTVNHMRIRAGLWGQDTRDILAFLQASNTPAKKVTVKSVSVDLANSGLS---GEAVYKSTCIACHGGDGKGAFPGIPDFTKSKGPLSKNDAELLSNMINGFQSPGSPMAMPPRGGNVSLTDADLKAVLGYMRTTFEK 200
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI000379810F (c-type cytochrome n=1 Tax=Kangiella aquimarina TaxID=261965 RepID=UPI000379810F) HSP 1 Score: 186 bits (473), Expect = 9.530e-57 Identity = 91/168 (54.17%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 73 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 D ++GAQ WADNC+RCHNMRDP E D+ W + HMR+RAGLTGQ RDILAFLQASN V+ N G VY +CV CHG+DGKGA+PG PDFT A G L+K+D+ LL +II GF+SP + M MP RGGN +LTDA+L A + +IR F + Sbjct: 36 DAVKGAQKWADNCARCHNMRDPKELSDEYWETTVNHMRIRAGLTGQDARDILAFLQASNTPSEKEIEKSVSI---NQFKSKLSGGDVYTSSCVACHGSDGKGALPGTPDFTNAKGPLSKNDEELLSNIINGFQSPGSPMAMPPRGGNASLTDADLKAVINYIRTTFGK 200
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A3B0XBH5_9ZZZZ (Cytochrome c domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XBH5_9ZZZZ) HSP 1 Score: 186 bits (473), Expect = 1.080e-56 Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 28 LSIGAAAETAVGD---AADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAA-GGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANF 570 L + ++A +A G+ D +GA++W+DNC+RCHN+RDP + RDD W M HMR+RAGLTG+ TRDILAFLQASN + V+ +T+TA+ A G VY QTC+ CHG DGKG +PG PDFT G L+K+DDVL+ H+ GF+S + M MPA+GGN ALT +L L +++ F Sbjct: 18 LVVSSSAFSAAGEWPPTGDAAKGAKTWSDNCNRCHNLRDPKQLRDDQWISTMFHMRVRAGLTGEDTRDILAFLQASNNTTSKKASVRASTSTASAEATAGLTGEGVYTQTCIACHGGDGKGTVPGAPDFTDKSGRLSKADDVLMNHMTNGFQSSGSPMAMPAKGGNSALTQGDLKNVLQYLKDTF 202
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI0012AEB9CE (cytochrome c n=1 Tax=Marinicella rhabdoformis TaxID=2580566 RepID=UPI0012AEB9CE) HSP 1 Score: 184 bits (467), Expect = 8.490e-56 Identity = 88/167 (52.69%), Postives = 124/167 (74.25%), Query Frame = 1 Query: 82 RGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTT--ANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 +GA++WA+NC+RCHNMRDP + RDD W + HMR+RAGLTGQ+TRDIL FLQ SN +PVK+++ + AN P + G VY QTC+ CHG DGKGA+PGVPD T +G L++S++VLL HI +GFKS + M MPA+GGNP+L++++L +A++++ F + Sbjct: 41 KGAKAWAENCARCHNMRDPKDLRDDQWITTVFHMRVRAGLTGQKTRDILTFLQESNN---PPQPVKISSRSSEANNPSNMTG-KEVYEQTCIACHGKDGKGAVPGVPDLTIPEGVLSQSEEVLLAHIRDGFKSKNSPMAMPAKGGNPSLSESDLLNVVAYMKSQFKQ 203
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A3B0XYP1_9ZZZZ (Cytochrome c domain-containing protein n=2 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XYP1_9ZZZZ) HSP 1 Score: 184 bits (466), Expect = 1.540e-55 Identity = 86/164 (52.44%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 85 GAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 576 G++ WA+NC+RCHNMR P E RDD W HMR+RAGLTGQ+TRD++ FL+ASN + S+ ++VA + Y++TC+ CHGA GKGA PG PDFT++ GAL+KSDDVL+ HI GF+S ++ M MP RGGNP L+DA++ A LA+IR F + Sbjct: 52 GSKVWAENCNRCHNMRGPKELRDDQWISTSFHMRLRAGLTGQETRDVITFLKASNTKMVSSGSMQVAAVISKGET----AKETYDKTCIACHGASGKGAFPGTPDFTSSSGALSKSDDVLIDHITNGFQSADSPMAMPPRGGNPNLSDADVKAVLAYIRETFGK 211 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101687.350.1 >prot_M-pyrifera_M_contig101687.350.1 ID=prot_M-pyrifera_M_contig101687.350.1|Name=mRNA_M-pyrifera_M_contig101687.350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp VLLLLTLAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFRback to top mRNA from alignment at M-pyrifera_M_contig101687:12..590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101687.350.1 ID=mRNA_M-pyrifera_M_contig101687.350.1|Name=mRNA_M-pyrifera_M_contig101687.350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig101687:12..590+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101687:12..590+ >mRNA_M-pyrifera_M_contig101687.350.1 ID=mRNA_M-pyrifera_M_contig101687.350.1|Name=mRNA_M-pyrifera_M_contig101687.350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig101687:12..590+ (Macrocystis pyrifera P11B4 male)back to top |