prot_M-pyrifera_M_contig101687.350.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig101687.350.1
Unique Name	prot_M-pyrifera_M_contig101687.350.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	193

Homology

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A831RW89_9GAMM (C-type cytochrome n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A831RW89_9GAMM)

HSP 1 Score: 210 bits (535), Expect = 2.990e-66
Identity = 107/189 (56.61%), Postives = 135/189 (71.43%), Query Frame = 0

Query:    7 LAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAA---GGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            L A ++G+AAET    A D  RGA SW+ NC+RCHNMR P+EFRD+LWR I+THMR+RAGLTGQQ RDILAF+QASN       P  VA+ +   PV       G  +Y  TC+ CHGADGKG +PG PDFT   G L+KSD+VLL+HI EGF+SP + M MPA+GGNP+LT +E++  L+++R  FSR
Sbjct:   12 LLAPAVGSAAETN-DKAGDANRGATSWSQNCNRCHNMRSPTEFRDELWRTIITHMRLRAGLTGQQQRDILAFMQASN------NPAPVASVSVAEPVTGGTKRSGEQIYGSTCIACHGADGKGVLPGTPDFTDKGGRLSKSDEVLLRHITEGFQSPGSPMAMPAKGGNPSLTPSEISEVLSYLRKQFSR 193

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A2G2HT17_9GAMM (Cytochrome c domain-containing protein n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2G2HT17_9GAMM)

HSP 1 Score: 192 bits (488), Expect = 3.940e-59
Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 0

Query:   25 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATT--TANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            D  RGA SWA NCSRCH MRDP EF D +WRPI+ HMR+R GLTGQQ RDIL FLQASN    +  P KVA     ++    +  G   Y+QTC+ CHGA GKG +PGVPD T ADG L+KSD+VL++HI EGF++P + M MPA+GGN  L DA++ + L+++R +F +
Sbjct:   27 DISRGAISWAQNCSRCHEMRDPKEFTDAMWRPIVAHMRVRGGLTGQQQRDILVFLQASN----NPTPKKVANNLKVSDSSKPSQSGKATYSQTCIACHGAAGKGVLPGVPDLTKADGRLSKSDEVLIKHIAEGFQTPGSPMAMPAKGGNADLNDADIKSVLSYLRESFGQ 192

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: S5TFL9_9GAMM (Cytochrome c, class I n=1 Tax=Cycloclasticus zancles 78-ME TaxID=1198232 RepID=S5TFL9_9GAMM)

HSP 1 Score: 190 bits (483), Expect = 3.980e-58
Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 0

Query:   23 AADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPV------DAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFS 191
            A D  RG+++W++NC RCH+MR P+E RDD W+  + HMR+RAGLTGQ+TRDILAFLQASN   +SA      TTT  P +       A  G  +Y   C+ CHGA+GKGA+PGVPDFT   G LTK+D  LL +II GF+SP + M MPARGGN +L+DAEL+A L +IR  FS
Sbjct:   40 AGDFSRGSKAWSENCMRCHSMRSPTELRDDQWKTTVFHMRVRAGLTGQETRDILAFLQASNAPISSAN-----TTTVKPTIKKVASSSAISGEKIYQSNCMACHGANGKGALPGVPDFTNKMGPLTKTDAQLLNNIINGFQSPNSSMQMPARGGNSSLSDAELSAALGYIRETFS 209

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI00048BB29C (c-type cytochrome n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI00048BB29C)

HSP 1 Score: 189 bits (479), Expect = 1.330e-57
Identity = 96/175 (54.86%), Postives = 117/175 (66.86%), Query Frame = 0

Query:   22 DAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASN----YRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            D A   RGA +WA++C RCHNMR+P+EFRDD WR IM HMR+RAGLTGQ+TRDILAFLQASN       A   P+  A TT   P     G  VY QTC+ CHGADGKGA+PGVPD T A+G L KSD  L++ I  G + P A + MP +GGNP LT+ ++   L ++R  F R
Sbjct:   35 DTASVARGAVAWANSCDRCHNMREPAEFRDDQWRAIMAHMRVRAGLTGQETRDILAFLQASNSPAQQPSAPVAPIPTAPTTGVHP-----GKAVYTQTCLACHGADGKGALPGVPDLTRANGPLAKSDAELIRSITAGVQRPGAPLAMPPKGGNPNLTETDIRQVLDYMRQAFGR 204

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A2K9B1P9_9GAMM (Cytochrome c domain-containing protein n=1 Tax=Kangiella profundi TaxID=1561924 RepID=A0A2K9B1P9_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 1.660e-57
Identity = 91/170 (53.53%), Postives = 115/170 (67.65%), Query Frame = 0

Query:   25 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGAS--ARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            D ++GAQ WADNC+RCHNMRDP E  D+ W   + HMR+RAGLTGQ  RDILAFLQASN       ++PV +     N       G  VY  +C+ CHG+DGKGA+PG PDFT A G L K+D+ LL ++I GF+SP + M MP RGGN +LTDA++ A L +IRA F +
Sbjct:   36 DAVKGAQKWADNCARCHNMRDPKELSDEYWETTVNHMRIRAGLTGQDARDILAFLQASNTPPEKEISKPVSI-----NQISSKLSGEEVYKSSCIACHGSDGKGALPGTPDFTNAKGPLNKNDEELLSNMINGFQSPGSPMAMPPRGGNASLTDADVKAVLGYIRATFGK 200

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A127M573_9GAMM (Cytochrome c domain-containing protein n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A127M573_9GAMM)

HSP 1 Score: 187 bits (475), Expect = 4.740e-57
Identity = 98/188 (52.13%), Postives = 120/188 (63.83%), Query Frame = 0

Query:    5 LTLAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            L L+A  +  A   A GDA    +GAQ WADNC+RCHNMRDP E  DD W   + HMR+RAGL GQ TRDILAFLQASN          V+   AN  +    G  VY  TC+ CHG DGKGA PG+PDFT + G L+K+D  LL ++I GF+SP + M MP RGGN +LTDA+L A L ++R  F +
Sbjct:   19 LLLSATFLTPALAEAKGDAG---KGAQKWADNCARCHNMRDPKELSDDYWETTVNHMRIRAGLWGQDTRDILAFLQASNTPAKKVTVKSVSVDLANSGLS---GEAVYKSTCIACHGGDGKGAFPGIPDFTKSKGPLSKNDAELLSNMINGFQSPGSPMAMPPRGGNVSLTDADLKAVLGYMRTTFEK 200

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI000379810F (c-type cytochrome n=1 Tax=Kangiella aquimarina TaxID=261965 RepID=UPI000379810F)

HSP 1 Score: 186 bits (473), Expect = 9.530e-57
Identity = 91/168 (54.17%), Postives = 112/168 (66.67%), Query Frame = 0

Query:   25 DPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            D ++GAQ WADNC+RCHNMRDP E  D+ W   + HMR+RAGLTGQ  RDILAFLQASN          V+    N       G  VY  +CV CHG+DGKGA+PG PDFT A G L+K+D+ LL +II GF+SP + M MP RGGN +LTDA+L A + +IR  F +
Sbjct:   36 DAVKGAQKWADNCARCHNMRDPKELSDEYWETTVNHMRIRAGLTGQDARDILAFLQASNTPSEKEIEKSVSI---NQFKSKLSGGDVYTSSCVACHGSDGKGALPGTPDFTNAKGPLSKNDEELLSNIINGFQSPGSPMAMPPRGGNASLTDADLKAVINYIRTTFGK 200

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A3B0XBH5_9ZZZZ (Cytochrome c domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XBH5_9ZZZZ)

HSP 1 Score: 186 bits (473), Expect = 1.080e-56
Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 0

Query:   10 LSIGAAAETAVGD---AADPIRGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAA-GGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANF 190
            L + ++A +A G+     D  +GA++W+DNC+RCHN+RDP + RDD W   M HMR+RAGLTG+ TRDILAFLQASN   +    V+ +T+TA+    A   G  VY QTC+ CHG DGKG +PG PDFT   G L+K+DDVL+ H+  GF+S  + M MPA+GGN ALT  +L   L +++  F
Sbjct:   18 LVVSSSAFSAAGEWPPTGDAAKGAKTWSDNCNRCHNLRDPKQLRDDQWISTMFHMRVRAGLTGEDTRDILAFLQASNNTTSKKASVRASTSTASAEATAGLTGEGVYTQTCIACHGGDGKGTVPGAPDFTDKSGRLSKADDVLMNHMTNGFQSSGSPMAMPAKGGNSALTQGDLKNVLQYLKDTF 202

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: UPI0012AEB9CE (cytochrome c n=1 Tax=Marinicella rhabdoformis TaxID=2580566 RepID=UPI0012AEB9CE)

HSP 1 Score: 184 bits (467), Expect = 8.490e-56
Identity = 88/167 (52.69%), Postives = 124/167 (74.25%), Query Frame = 0

Query:   28 RGAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTT--ANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            +GA++WA+NC+RCHNMRDP + RDD W   + HMR+RAGLTGQ+TRDIL FLQ SN      +PVK+++ +  AN P +  G   VY QTC+ CHG DGKGA+PGVPD T  +G L++S++VLL HI +GFKS  + M MPA+GGNP+L++++L   +A++++ F +
Sbjct:   41 KGAKAWAENCARCHNMRDPKDLRDDQWITTVFHMRVRAGLTGQKTRDILTFLQESNN---PPQPVKISSRSSEANNPSNMTG-KEVYEQTCIACHGKDGKGAVPGVPDLTIPEGVLSQSEEVLLAHIRDGFKSKNSPMAMPAKGGNPSLSESDLLNVVAYMKSQFKQ 203

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BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Match: A0A3B0XYP1_9ZZZZ (Cytochrome c domain-containing protein n=2 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XYP1_9ZZZZ)

HSP 1 Score: 184 bits (466), Expect = 1.540e-55
Identity = 86/164 (52.44%), Postives = 115/164 (70.12%), Query Frame = 0

Query:   29 GAQSWADNCSRCHNMRDPSEFRDDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTANPPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQHIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR 192
            G++ WA+NC+RCHNMR P E RDD W     HMR+RAGLTGQ+TRD++ FL+ASN +  S+  ++VA   +            Y++TC+ CHGA GKGA PG PDFT++ GAL+KSDDVL+ HI  GF+S ++ M MP RGGNP L+DA++ A LA+IR  F +
Sbjct:   52 GSKVWAENCNRCHNMRGPKELRDDQWISTSFHMRLRAGLTGQETRDVITFLKASNTKMVSSGSMQVAAVISKGET----AKETYDKTCIACHGASGKGAFPGTPDFTSSSGALSKSDDVLIDHITNGFQSADSPMAMPPRGGNPNLSDADVKAVLAYIRETFGK 211

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig101687.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A831RW89_9GAMM	2.990e-66	56.61	C-type cytochrome n=1 Tax=Thiolapillus brandeum Ta...	[more]
A0A2G2HT17_9GAMM	3.940e-59	55.29	Cytochrome c domain-containing protein n=1 Tax=Met...	[more]
S5TFL9_9GAMM	3.980e-58	55.43	Cytochrome c, class I n=1 Tax=Cycloclasticus zancl...	[more]
UPI00048BB29C	1.330e-57	54.86	c-type cytochrome n=1 Tax=Thermithiobacillus tepid...	[more]
A0A2K9B1P9_9GAMM	1.660e-57	53.53	Cytochrome c domain-containing protein n=1 Tax=Kan...	[more]
A0A127M573_9GAMM	4.740e-57	52.13	Cytochrome c domain-containing protein n=8 Tax=Gam...	[more]
UPI000379810F	9.530e-57	54.17	c-type cytochrome n=1 Tax=Kangiella aquimarina Tax...	[more]
A0A3B0XBH5_9ZZZZ	1.080e-56	49.73	Cytochrome c domain-containing protein n=1 Tax=hyd...	[more]
UPI0012AEB9CE	8.490e-56	52.69	cytochrome c n=1 Tax=Marinicella rhabdoformis TaxI...	[more]
A0A3B0XYP1_9ZZZZ	1.540e-55	52.44	Cytochrome c domain-containing protein n=2 Tax=hyd...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 102..189 e-value: 5.9E-19 score: 70.1
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 93..187
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 4..84
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 104..186 e-value: 9.9E-11 score: 41.8
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 103..190 score: 9.663
IPR002323	Cytochrome c, class IE	PANTHER	PTHR40942	FAMILY NOT NAMED	coord: 98..189
None	No IPR available	PANTHER	PTHR40942:SF4		coord: 98..189
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..10
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 16..192
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 11..15
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.822

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig101687	contig	M-pyrifera_M_contig101687:12..590 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig101687.350.1	mRNA_M-pyrifera_M_contig101687.350.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig101687 12..590 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig101687.350.1 ID=prot_M-pyrifera_M_contig101687.350.1|Name=mRNA_M-pyrifera_M_contig101687.350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
VLLLLTLAALSIGAAAETAVGDAADPIRGAQSWADNCSRCHNMRDPSEFR
DDLWRPIMTHMRMRAGLTGQQTRDILAFLQASNYRGASARPVKVATTTAN
PPVDAAGGATVYNQTCVVCHGADGKGAIPGVPDFTAADGALTKSDDVLLQ
HIIEGFKSPEAIMMMPARGGNPALTDAELAATLAHIRANFSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom
IPR002323	Cyt_CIE