mRNA_M-pyrifera_M_contig1168.3479.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: D7FUV7_ECTSI (Mevalonate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV7_ECTSI) HSP 1 Score: 286 bits (731), Expect = 2.200e-90 Identity = 162/239 (67.78%), Postives = 177/239 (74.06%), Query Frame = 1
Query: 1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS----------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGN---PIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLS---------LSGGMFGDPRGAVGGT--PLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LS+ AFSASLPVGAGLGSSAALCVATSAALTRL+ G RRPS S+LERINAWAFAGETVLHGTPSGLDNTVSC+GGAIKFVKG GA N PIPGFPPLPI+LTNTLVPK+T ALVAGVRRLLEAH A FD+IG IA EF D + ++ GD A PL+ ECVGEL +MNHRLLCALGVGHPAL+RVC VA+AHGC+SKLTGAG
Sbjct: 220 LSLRAFSASLPVGAGLGSSAALCVATSAALTRLADIISRAAVEGGGERGGGGSRRPSGSELERINAWAFAGETVLHGTPSGLDNTVSCYGGAIKFVKGMDGAANTTEPIPGFPPLPILLTNTLVPKNTGALVAGVRRLLEAHRPATTATFDAIGAIAAEFLDRAAASVPAATPVAAAECGDGAAAPAAPAQPLTAECVGELAEMNHRLLCALGVGHPALERVCEVASAHGCRSKLTGAG 458
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A7S4B5A5_CHRCT (Mevalonate kinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5A5_CHRCT) HSP 1 Score: 157 bits (396), Expect = 7.580e-42 Identity = 106/251 (42.23%), Postives = 134/251 (53.39%), Query Frame = 1
Query: 1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS---------------------------------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAG---NPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
L++ SA LPVGAGLGSSAA V+ SAAL RL RPSP+ + INAWA++ E +LHGTPSGLDN+VSC+G A+K ++ P+ FP L ++LTNT VP+ TR V+GVRRL E+ +F++I +AD F DL +SGG +V G L+ +G LV MNH LL LGV PAL VC VA HG +KLTGAG
Sbjct: 143 LNLQVRSAKLPVGAGLGSSAAFSVSLSAALLRLQLLCVSMAAEAPESLLAQARDAMSPAGQRLASLLQTHDIDGRSARPSPTAKQLINAWAYSSECILHGTPSGLDNSVSCYGEAVKLMRAAPAEALLFEPVKRFPKLQVLLTNTKVPRKTREQVSGVRRLHESLPSVTIPVFEAISSVADAFLDL-ISGG-------SVEGAALAQ--IGRLVSMNHALLTVLGVSAPALQLVCDVAGKHGLPTKLTGAG 383
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI001C716BC7 (mevalonate kinase-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C716BC7) HSP 1 Score: 154 bits (388), Expect = 2.070e-41 Identity = 91/213 (42.72%), Postives = 128/213 (60.09%), Query Frame = 1
Query: 19 SASLPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADE----FSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
S+ LP GAGLGSSAA V S AL ++G + + LE+++ WAF E ++HGTPSG+DN++ +GGA+ F GT P+ PPL ++L NT VP+ T+ALV GVR E H + I +S+ +A+ DL+ +G D + E VGELV++NH LLCALGV HP+LDR+ A+A ++G ++KLTGAG
Sbjct: 139 SSQLPTGAGLGSSAAYAVCLSGALLHIAGRLS-----QGEDKANLEKVSQWAFRSEQIIHGTPSGIDNSICTYGGAVNFKSGTS---TPVE-VPPLQVLLVNTKVPRSTKALVTGVRERRERHPSVIDPILESLDSLAERGIQALHDLASAGR---DQESVA-----AHETVGELVEINHSLLCALGVSHPSLDRLVALARSNGLRAKLTGAG 334
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI0018A72451 (mevalonate kinase-like n=2 Tax=Penaeus TaxID=133894 RepID=UPI0018A72451) HSP 1 Score: 151 bits (381), Expect = 2.230e-40 Identity = 91/211 (43.13%), Postives = 123/211 (58.29%), Query Frame = 1
Query: 19 SASLPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDL--SLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
S+ LP GAGLGSSAA V S AL ++G + LE++ WAF E ++HGTPSG+DN++ +GGA+ F GG P+ PPL ++L NT VP+ T+ALV GVR E H + I DS+ +A+ L+ R A + E VGEL+++NH LLCALGV HP+LDR+ A+A A+G + KLTGAG
Sbjct: 139 SSQLPTGAGLGSSAAYAVCLSGALLHIAGRLGPGE-----DQANLEKVCQWAFRSEQIIHGTPSGIDNSICTYGGAVNF---KGGTSAPVE-VPPLHVLLVNTKVPRSTKALVTGVRERRERHPSVIDPILDSLDALAERGIQALHDLASATRDQDRAA------AHETVGELLEINHSLLCALGVSHPSLDRLVALARANGLRGKLTGAG 334
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A7S2NTU7_9STRA (Mevalonate kinase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTU7_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.760e-39 Identity = 100/221 (45.25%), Postives = 127/221 (57.47%), Query Frame = 1
Query: 28 LPVGAGLGSSAALCVATSAALTRL---SGXXXXXXXXR-------RPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGF-----PPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LP+GAGLGSSAA CVA SAAL RL +G R RP + L+ INAWAFA E V+HG PSGLDNTVSC+GGA+ + K GN + F PPL ++LTNT +P+ T+ALVAGV ++ E V +F +IG I+D+F G RG +S +L++ N LL A+GV H ALD +C + G SKLTGAG
Sbjct: 21 LPLGAGLGSSAAFCVACSAALYRLREKTGIMGVAAVDRNIKDNNTRPEQASLDIINAWAFASEGVIHGNPSGLDNTVSCYGGAVYYQKDAE-TGN-LRAFHELVVPPLDMILTNTFIPRSTKALVAGVHKVKEDFEFTV-DVFAAIGRISDQFRKALDPG-----DRGYRDTAKIS-----QLIRTNQNLLKAIGVSHKALDEICHITEQMGVASKLTGAG 228
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A3R7N861_PENVA (Mevalonate kinase n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7N861_PENVA) HSP 1 Score: 147 bits (370), Expect = 3.960e-39 Identity = 88/208 (42.31%), Postives = 121/208 (58.17%), Query Frame = 1
Query: 28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDL--SLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LP GAGLGSSAA V S AL G + LE++ WAF E ++HGTPSG+DN++ +GGA+ F GGA P+ PPL ++L NT VP+ T+AL++GVR E H A+ I DS+ +A+ L+ R A + E + EL+++N LLCALGV HP+LDR+ A+A A+G ++KLTGAG
Sbjct: 102 LPTGAGLGSSAAYAVCLSGALLTSQGRLDPGEGR-----ANLEKVCRWAFRSEQIIHGTPSGIDNSICTYGGAVNF---KGGASTPVE-VPPLQVLLVNTKVPRSTKALISGVRERRERHPSAIDPILDSLDALAERGIQALHDLASATRDQDRAA------AHETIAELIEINQGLLCALGVSHPSLDRLVALAQANGLRAKLTGAG 294
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A835Z5H2_9STRA (Mevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H2_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.270e-37 Identity = 101/239 (42.26%), Postives = 126/239 (52.72%), Query Frame = 1
Query: 1 LSMTAFSASLPVGAGLGSSAALCVATSAALTRLS-----------------------GXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVP-KDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
L + A S LPV AGLGSSAALCVAT+AAL L X R P LE +NAWA+A ET++HG PSGLDNTVSC+GG +++V+ + FP L ++LT+T V + TR LVA V LL A++ ++I IA +F G ++ E VG L+ MNH LL ALGVGH +LD VCA A GC SKLTGAG
Sbjct: 148 LRVRAVSCCLPVSAGLGSSAALCVATAAALLELRRRLAXXXXXXXXXXXXXXXXXXXXXAPAGKRERVWQPEGLETLNAWAYAAETLIHGNPSGLDNTVSCYGGVLRYVREPRST-ETVATFPQLSMLLTDTRVAGRSTRRLVAHVATLLGRCPDVTARVLEAIDAIAKQFLAC---------------GDEMTAEEVGALMVMNHHLLGALGVGHASLDAVCAAAARRGCWSKLTGAG 370
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI001B34F857 (mevalonate kinase n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34F857) HSP 1 Score: 144 bits (362), Expect = 1.850e-37 Identity = 98/210 (46.67%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPS----PSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LP GAGLGSSAA V +AAL L P+ LE IN WAF GE V+HG PSG+DN VS +GGA++F +G A + P L I+LTNT VP+ T+ALVAGVR L V + SI I+ E + GD A TP + EL+ MN LL ALGVGH +LDR+C V TAHG SKLTGAG
Sbjct: 137 LPTGAGLGSSAAYSVCLAAALLTLCDDIPDPRKDGAPTGRWAKEDLELINKWAFQGERVIHGNPSGVDNAVSTWGGALRFQQGKISA---LQRPPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIVDPLLTSINAISLECERV------LGDLVAAP--TPEQYLLLEELIDMNQHLLNALGVGHASLDRLCQVTTAHGLHSKLTGAG 335
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: UPI0003291DE4 (mevalonate kinase isoform X3 n=2 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI0003291DE4) HSP 1 Score: 144 bits (362), Expect = 2.140e-37 Identity = 96/210 (45.71%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 28 LPVGAGLGSSAALCVATSAALT----RLSGXXXXXXXXRRPSPSQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LP GAGLGSSAA V +AAL + R + LE IN WAF GE V+HG PSG+DN VS +GGA+++ +G +P+ PPL I+LTNT VP+ T+ALVAGVR L VA + SI I+ E + G M DP P + EL+ MN L ALGVGH +LDR+C V TA G SKLTGAG
Sbjct: 145 LPTGAGLGSSAAYSVCVAAALLTACEEIPNPLKDGHHTNRWTGEDLELINRWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGKI---SPLKRPPPLKILLTNTKVPRSTKALVAGVRSRLTKFPEIVAPLLTSIDAISVECERVL--GEMATDP------VPEQYLVLEELIDMNQHHLNALGVGHASLDRLCQVTTARGLHSKLTGAG 343
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Match: A0A5F9CAN5_RABIT (Mevalonate kinase n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CAN5_RABIT) HSP 1 Score: 141 bits (356), Expect = 1.200e-36 Identity = 97/210 (46.19%), Postives = 116/210 (55.24%), Query Frame = 1
Query: 28 LPVGAGLGSSAALCVATSAALTRLSGXXXXXXXXRRPSP----SQLERINAWAFAGETVLHGTPSGLDNTVSCFGGAIKFVKGTGGAGNPIPGFPPLPIVLTNTLVPKDTRALVAGVRRLLEAHHRAVAKIFDSIGFIADEFSDLSLSGGMFGDPRGAVGGTPLSVECVGELVQMNHRLLCALGVGHPALDRVCAVATAHGCKSKLTGAG 645
LP GAGLGSSAA V +AAL PS LE IN WAF GE V+HG PSG+DN VS +GGA+++ +G A + P L I+LTNT VP+ T+ALVAGVR L VA + SI I+ E + GD AV TP + EL+ MN L ALGVGH +LDR+C V AHG SKLTGAG
Sbjct: 129 LPTGAGLGSSAAYSVCLAAALLTACEDIPNPQKDGAPSSRWAKDDLELINKWAFQGERVIHGNPSGVDNAVSTWGGALRYQQGKISA---LQRPPTLQILLTNTKVPRSTKALVAGVRSRLLKFPEIVAPLLTSIDAISLECERV------LGDM--AVAATPEQYLVLEELIDMNQHHLNALGVGHASLDRLCQVTMAHGLHSKLTGAG 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1168.3479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1168.3479.1 >prot_M-pyrifera_M_contig1168.3479.1 ID=prot_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp MTAFSASLPVGAGLGSSAALCVATSAALTRLSGGGGGGGGGRRPSPSQLEback to top mRNA from alignment at M-pyrifera_M_contig1168:22382..23839- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1168.3479.1 ID=mRNA_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig1168:22382..23839- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1168:22382..23839- >mRNA_M-pyrifera_M_contig1168.3479.1 ID=mRNA_M-pyrifera_M_contig1168.3479.1|Name=mRNA_M-pyrifera_M_contig1168.3479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig1168:22382..23839- (Macrocystis pyrifera P11B4 male)back to top |