mRNA_M-pyrifera_M_contig11674.3467.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11674.3467.1
Unique NamemRNA_M-pyrifera_M_contig11674.3467.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: D7FJF5_ECTSI (Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF5_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 2.240e-172
Identity = 300/514 (58.37%), Postives = 347/514 (67.51%), Query Frame = 1 
Query:    1 MATLPGTRRARGGSNDELAALPKPPGRSPRSASTRRASAVAEVAAADVLTAEEEYLLKIFRRYRKHEPASPAAKAPGIDGKALPPPNRRC-----PSPVPDRSKAPLSAKGGLGAVGSAAVDKKGKPGPGGDKAPAKKTDQQPTPPPPKMDLLSRTKMILEQKRKAAAAGFTRAGSAASAGA-GVQRKAKISKAAGAHSSGASARLDPVKYPTSGLLLKQEFRTFEEGEEDGERAYTPVDPLVRNLTNFGLADGDVG------KKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRRFVAMNNREDNNWGQQEKYMLP-RWPDMFDVSINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAAKERQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYGAIQVRVFSRE-KNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR 1500
            MA      R + GSND+L  LP P  R  R   TRR  A AE  AADVLT EEEY                                        PSP   ++  PLS KG   A  +AA    GKPG      P  + +++P P P   D +SR KMILE+KRKAAA    R GS AS+GA GV RKAKI+KA G  SS  + RLDP+KYP SGLLL+ E+RTF E E+DGER Y P+DPLVR L NFG+AD + G      K+ HETLVMR T+PAHS SW +NICPK+H +F+EILFHFNPRRRFVAMNNRE N WGQQEK+ML  RWP++F+VSINVAVQID AGFHVAVDGKYCATFAHR KVPP+GE+L L+VMT DDY TNL LVVHEIWWGHKDTMPGLPG  KE    R+A+ WR   + D ++DLH   LP MP+ + +E+VRKRL DMFQPYGAIQVRVF RE KNFGFIKFR+H  AAKALEEL GAEV G+ +RLS+AA R
Sbjct:    1 MAATGRVSRRKTGSNDDLVELPPPSVRLKRP--TRRKPA-AEDLAADVLTPEEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSPPVPKASPPLS-KGTPVATAAAAAAGDGKPGIAAATVP--QAEEKPGPAP--TDAVSRAKMILEKKRKAAA----RFGSGASSGAAGVLRKAKITKATGTPSS--NPRLDPIKYPASGLLLRDEYRTFAEIEKDGERVYEPLDPLVRLLKNFGIADSNSGADGVAKKQFHETLVMRATIPAHSTSWAINICPKDHKDFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINVAVQIDAAGFHVAVDGKYCATFAHRTKVPPSGEELVLQVMTRDDYDTNLRLVVHEIWWGHKDTMPGLPGRDKEPN-RRTAENWRGSNSNDAFVDLHAAGLPPMPTSDLEESVRKRLIDMFQPYGAIQVRVFHRESKNFGFIKFREHNDAAKALEELGGAEVHGKPMRLSKAAAR 499
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A6H5JWU1_9PHAE (Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU1_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 3.700e-152
Identity = 216/305 (70.82%), Postives = 247/305 (80.98%), Query Frame = 1 
Query:  610 KYPTSGLLLKQEFRTFEEGEEDGERAYTPVDPLVRNLTNFGLADGDVG------KKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRRFVAMNNREDNNWGQQEKYMLP-RWPDMFDVSINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAAKERQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYGAIQVRVFSRE-KNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR 1500
            KYP SGLLL+ E+RTF E E++GERAY P+DPLVR L NFG+AD + G      K+ HETLVMR T+PAHS SW +NICPK+H NF+EILFHFNPRRRFVAMNNRE N WGQQEK+ML  RWP++F+VSIN+AVQID AGFHVAVDGKYCATFAHR KVPPN E+L L+VMT DDY TNL LVVHEIWWGHKDTMPGLPG  KE    R+A+ WR   + D ++DLH   LP MP+ + QE+VRKRL DMFQPYGAIQVRVF RE KNFGFIKFR+H  AAKALEEL GAEV G+ +RLS+AA R
Sbjct:   13 KYPASGLLLRDEYRTFAEIEKEGERAYEPLDPLVRLLKNFGIADSNSGADGVVKKQFHETLVMRATIPAHSTSWAINICPKDHKNFEEILFHFNPRRRFVAMNNREGNIWGQQEKHMLSTRWPEVFNVSINLAVQIDAAGFHVAVDGKYCATFAHRTKVPPNDEELVLQVMTRDDYDTNLPLVVHEIWWGHKDTMPGLPGRDKEPN-RRTAENWRGSNSNDAFVDLHAAGLPPMPNSDLQESVRKRLVDMFQPYGAIQVRVFHRESKNFGFIKFREHNDAAKALEELGGAEVHGKPMRLSKAAAR 316
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A835YJA2_9STRA (Galectin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA2_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.140e-52
Identity = 118/353 (33.43%), Postives = 184/353 (52.12%), Query Frame = 1 
Query:  460 ILEQKRKAAAAGFTRAGSAASAGAGVQRKAKISKAAGAHSSGASARLDPVKYPTSGLLLKQEFRTFEEGEEDGERAYTPVDPLVRNLTNFGLADGDVGKKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRR----FVAMNNREDNNWGQQEKYMLPRWPDMFDVSINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGED--LALEVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAAKERQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYGAIQVRVFSREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR 1500
            +L++KR+A  A   RA   +S GA   ++AK    AG      S  ++   +P SGL+  Q++   +E              LV  LT+F L          +TLV+R+TVP  S  WG+++CP++H++F+ +L+HFNPR +     +  N+R D  W       L  +P MF ++ + A+QID  GFHV + G Y  +F HR  +    +D  L LEV   DDYG    L +H+IWWG K   P  P  A+E +   S      GE E  + +LH+ N+     P ++  +R+ L D+F  Y    V+V S  + +GFI F+    AA+AL+E +G  V G+ +++++A  R
Sbjct:    1 MLQEKREAQQAAAARA---SSFGAPAPKRAKFVTVAGKT---VSTEINKDAFPVSGLVWNQDWDPTQETAR-----------LVVPLTDFAL-------DQKQTLVLRMTVPDSSDKWGISLCPRDHADFKNVLYHFNPRSKERGGILVQNSRRDGQWEHAVTDRLNEFPAMFGLTFDTAIQIDTWGFHVTLAGDYQLSFKHRRPIEEWQQDGQLVLEVPRTDDYGNPQSLKLHQIWWGKKKYHPNQP-TAEELEADHSGI--GGGEYETEFRNLHISNIAHSDDPAEEALIRQELEDLFAKYDVEAVKVISG-RGYGFINFKSAEGAAQALQETNGTRVHGQDIKVTKARSR 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A7S2E642_9STRA (Galectin n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E642_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.530e-21
Identity = 78/273 (28.57%), Postives = 123/273 (45.05%), Query Frame = 1 
Query:  655 FEEGEEDGERAYTPVDPLVRNLTNFGLADGDVGKKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRR----FVAMNNREDNNWGQQEKYMLPRWPDMF-DVSINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPG-LPGAAKERQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYG-AIQVRV-FSREKNFGFIKFRDHGSAAKALEELS 1449
            F +G  DG         L   L +F       G  ++ TL ++ +VP  S+ +  NI    H ++  +LFHFNPR+R     + +N++++  WGQ     L + P +F  VS  + +QI    F V +  K+CA   HR  +P     L  +V + DDYG+    +V+ +WWG KD   G L G A   Q + S  P +          L +  L  +    Q +  R  L   F+ YG A+  +V       F F++      A  AL+E++
Sbjct:   82 FADGPTDGA--------LELELPDFHAQKASSGSGNN-TLAIKFSVPKESRRFSFNIAGPNHGDYNNVLFHFNPRQRQKGGHLVINDKQEGTWGQGINVPLSQIPVIFGQVSCTLILQITGDCFDVFIGDKHCARLDHRTSLPRENCSLHFQVPSTDDYGSLENWIVYRVWWGRKDLKAGDLEGVAGVNQYS-SVHPKK----------LFISGLTKIKHEAQVDLRRAELERAFRKYGGALGCKVTVPTNSTFAFVEVETERQADIALQEMA 334
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: B8LBZ9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBZ9_THAPS)

HSP 1 Score: 103 bits (258), Expect = 9.730e-20
Identity = 73/265 (27.55%), Postives = 120/265 (45.28%), Query Frame = 1 
Query:  694 PVD----PLVRNLTNFGLAD-GDVGKKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRR----RFVAMNNREDNNWGQQEKYMLPRWPDMFDV-SINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAAKERQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYGAIQVRV---FSREKNFGFIKFRDHGSAAKALEELS 1449
            PVD     L   L++F  +  GD     + TL ++   P  S  + +NI    + N+  ILFHFNPR       + +N+R+++ WG      L   P MF   +  + VQ++  GF V V+G +C    +R ++P     L L+  ++DDYG      V+ +WWG K++M      A++       + + A   +     L V NLP + +  + +  R  L   F+ YG  Q  V     +   F F++      A  AL E++
Sbjct:  292 PVDFIDGSLELELSDFDPSKLGDSYSSGNNTLAIKFNAPEESSRFSINIAGPNNDNYNNILFHFNPRHFQKGGQLVINDRKESMWGNDISVPLSTLPLMFGTHACTLVVQMNEDGFDVFVEGVHCCRLEYRTELPRGKGSLFLQCPSSDDYGNPEDWSVYRVWWGRKESM------ARDLNGVAGVNLYSAVHPK----KLFVSNLPKLHTDPEVDLRRAELERAFRKYGGPQGAVSVLVPKNSTFAFVEVASEQQADLALLEMA 546
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A7S4RA39_9STRA (Galectin n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA39_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.410e-18
Identity = 59/190 (31.05%), Postives = 92/190 (48.42%), Query Frame = 1 
Query:  655 FEEGEEDGERAYTPVDPLVRNLTNFGLADGDVGKKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRR----FVAMNNREDNNWGQQEKYMLPRWPDMF-DVSINVAVQIDRAGFHVAVDGKYCATFAHRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPG-LPGAAKERQ 1206
            F +G  DG         L   L +F       G  ++ TL ++ +VP  S+ +  NI    H ++  +LFHFNPR+R     + +N++++  WGQ     L + P +F  +S  + +QI    F V +  K+CA   HR  +P     L  +V + DDYG+    +V+ +WWG KD   G L G A   Q
Sbjct:  266 FADGPTDGA--------LELELPDFHAQKASSGSGNN-TLAIKFSVPKESRRFSFNIAGPNHGDYNNVLFHFNPRQRQKGGHLVINDKQEGTWGQGINVPLSQIPVIFGQISCTLILQITGDCFDVFIGDKHCARLDHRTSLPRENCSLHFQVPSTDDYGSLENWIVYRVWWGRKDLKAGDLEGVAGVNQ 446
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: UPI0013D3E11F (RNA-binding protein n=1 Tax=Parabacteroides sp. 52 TaxID=2302940 RepID=UPI0013D3E11F)

HSP 1 Score: 61.2 bits (147), Expect = 5.290e-8
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 1 
Query: 1327 LSDMFQPYGAIQV------RVFSREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR*EPFVYAVTGVRAGRGFPGVTARH 1572
            L+++FQ YGA+        R  +R K FGF++  D+ +AAKA+EEL+GAE  GRTL +S A  R E    +    R G G+ G   R+
Sbjct:   17 LAELFQEYGAVASAKVVIDRQTNRSKGFGFVEIEDNEAAAKAIEELNGAEYAGRTLAVSEARPREERPARSFNNNRGG-GYGGGRNRY 103
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: F3ZPI0_9BACE (RNP-1 like RNA-binding protein n=1 Tax=Bacteroides coprosuis DSM 18011 TaxID=679937 RepID=F3ZPI0_9BACE)

HSP 1 Score: 57.0 bits (136), Expect = 1.670e-6
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1 
Query: 1327 LSDMFQPYGAI-QVRVF-----SREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR*EPFVYAVTGVRAGRGFPG 1557
            L+++F+PYGA+   RV      +R K FGF++  D  +A KA+ EL+GAEV GR + +S A  R E    +    R G G+ G
Sbjct:   17 LAEIFEPYGAVTSARVIKDKFTNRSKGFGFVEMEDDEAATKAINELNGAEVDGRPIAVSEARPREERPARSFNNNRGG-GYGG 98
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A1W6LP84_9BACT (Splicing factor, CC1-like family n=2 Tax=Sedimentisphaera TaxID=2483368 RepID=A0A1W6LP84_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 1.150e-5
Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 1 
Query: 1264 LHVGNLPTMPSPEQQEAVRKRLSDMFQPYG-AIQVRVF-----SREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR*E 1506
            ++VGNL         +    +L D+F  +G  +  RV       R K FGF++  D  SAA A+EEL+G E++GRT+++S A  R E
Sbjct:    5 IYVGNL-------NYKVEAGQLEDVFSEFGDVVSARVILDRETKRSKGFGFVEMGDDDSAATAIEELNGHELEGRTMKVSEATPREE 84
[Close]
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Match: A0A7V5PBV8_9BACT (RNA-binding protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5PBV8_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 1.150e-5
Identity = 25/87 (28.74%), Postives = 51/87 (58.62%), Query Frame = 1 
Query: 1258 IDLHVGNLPTMPSPEQQEAVRKRLSDMFQPYGAIQV------RVFSREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR 1500
            ++++VGNL         +   + L ++F+ YG I+       +   R K FGF++ ++   A K+++EL+GA+++GR +++S+A  R
Sbjct:    1 MNIYVGNL-------HYDVTGEDLKEIFEKYGEIETAKVITDKYSGRSKGFGFVEMKNDNEALKSIDELNGADIKGRNIKVSQARPR 80
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11674.3467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FJF5_ECTSI2.240e-17258.37Galectin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JWU1_9PHAE3.700e-15270.82Galectin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
A0A835YJA2_9STRA1.140e-5233.43Galectin n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A7S2E642_9STRA3.530e-2128.57Galectin n=1 Tax=Ditylum brightwellii TaxID=49249 ... [more]
B8LBZ9_THAPS9.730e-2027.55Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S4RA39_9STRA2.410e-1831.05Galectin n=3 Tax=Ditylum brightwellii TaxID=49249 ... [more]
UPI0013D3E11F5.290e-840.91RNA-binding protein n=1 Tax=Parabacteroides sp. 52... [more]
F3ZPI0_9BACE1.670e-639.76RNP-1 like RNA-binding protein n=1 Tax=Bacteroides... [more]
A0A1W6LP84_9BACT1.150e-536.78Splicing factor, CC1-like family n=2 Tax=Sedimenti... [more]
A0A7V5PBV8_9BACT1.150e-528.74RNA-binding protein n=1 Tax=Bacteroidetes bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11674contigM-pyrifera_M_contig11674:4245..8789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score512.3
Seed ortholog evalue2.6e-142
Seed eggNOG ortholog2880.D7FJF5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Galactoside-binding lectin
EggNOG OGs28MKM@1,2QU4C@2759
Ec32 ortholog descriptionConcanavalin A-like lectin/glucanase domain
Ec32 orthologEc-14_006150.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1715
Cds size1503
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11674.3467.1prot_M-pyrifera_M_contig11674.3467.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11674 4457..8789 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.1167073-UTR-M-pyrifera_M_contig11674:4244..44561622815684.1167073-UTR-M-pyrifera_M_contig11674:4244..4456Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11674 4245..4456 -
1692277520.4799488-UTR-M-pyrifera_M_contig11674:4244..44561692277520.4799488-UTR-M-pyrifera_M_contig11674:4244..4456Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11674 4245..4456 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.1273003-CDS-M-pyrifera_M_contig11674:4456..45651622815684.1273003-CDS-M-pyrifera_M_contig11674:4456..4565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 4457..4565 -
1692277520.491107-CDS-M-pyrifera_M_contig11674:4456..45651692277520.491107-CDS-M-pyrifera_M_contig11674:4456..4565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 4457..4565 -
1622815684.1399937-CDS-M-pyrifera_M_contig11674:4831..50411622815684.1399937-CDS-M-pyrifera_M_contig11674:4831..5041Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 4832..5041 -
1692277520.5069811-CDS-M-pyrifera_M_contig11674:4831..50411692277520.5069811-CDS-M-pyrifera_M_contig11674:4831..5041Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 4832..5041 -
1622815684.1494849-CDS-M-pyrifera_M_contig11674:5369..54951622815684.1494849-CDS-M-pyrifera_M_contig11674:5369..5495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 5370..5495 -
1692277520.5188715-CDS-M-pyrifera_M_contig11674:5369..54951692277520.5188715-CDS-M-pyrifera_M_contig11674:5369..5495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 5370..5495 -
1622815684.161256-CDS-M-pyrifera_M_contig11674:6137..62651622815684.161256-CDS-M-pyrifera_M_contig11674:6137..6265Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 6138..6265 -
1692277520.5273068-CDS-M-pyrifera_M_contig11674:6137..62651692277520.5273068-CDS-M-pyrifera_M_contig11674:6137..6265Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 6138..6265 -
1622815684.1753123-CDS-M-pyrifera_M_contig11674:6785..71031622815684.1753123-CDS-M-pyrifera_M_contig11674:6785..7103Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 6786..7103 -
1692277520.5357668-CDS-M-pyrifera_M_contig11674:6785..71031692277520.5357668-CDS-M-pyrifera_M_contig11674:6785..7103Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 6786..7103 -
1622815684.1852758-CDS-M-pyrifera_M_contig11674:7635..81301622815684.1852758-CDS-M-pyrifera_M_contig11674:7635..8130Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 7636..8130 -
1692277520.5448377-CDS-M-pyrifera_M_contig11674:7635..81301692277520.5448377-CDS-M-pyrifera_M_contig11674:7635..8130Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 7636..8130 -
1622815684.1970673-CDS-M-pyrifera_M_contig11674:8672..87891622815684.1970673-CDS-M-pyrifera_M_contig11674:8672..8789Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 8673..8789 -
1692277520.5544634-CDS-M-pyrifera_M_contig11674:8672..87891692277520.5544634-CDS-M-pyrifera_M_contig11674:8672..8789Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11674 8673..8789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11674.3467.1

>prot_M-pyrifera_M_contig11674.3467.1 ID=prot_M-pyrifera_M_contig11674.3467.1|Name=mRNA_M-pyrifera_M_contig11674.3467.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=501bp
MATLPGTRRARGGSNDELAALPKPPGRSPRSASTRRASAVAEVAAADVLT
AEEEYLLKIFRRYRKHEPASPAAKAPGIDGKALPPPNRRCPSPVPDRSKA
PLSAKGGLGAVGSAAVDKKGKPGPGGDKAPAKKTDQQPTPPPPKMDLLSR
TKMILEQKRKAAAAGFTRAGSAASAGAGVQRKAKISKAAGAHSSGASARL
DPVKYPTSGLLLKQEFRTFEEGEEDGERAYTPVDPLVRNLTNFGLADGDV
GKKHHETLVMRVTVPAHSQSWGVNICPKEHSNFQEILFHFNPRRRFVAMN
NREDNNWGQQEKYMLPRWPDMFDVSINVAVQIDRAGFHVAVDGKYCATFA
HRAKVPPNGEDLALEVMTADDYGTNLGLVVHEIWWGHKDTMPGLPGAAKE
RQPARSADPWRAGENEDTYIDLHVGNLPTMPSPEQQEAVRKRLSDMFQPY
GAIQVRVFSREKNFGFIKFRDHGSAAKALEELSGAEVQGRTLRLSRAAGR
*
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mRNA from alignment at M-pyrifera_M_contig11674:4245..8789-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11674.3467.1 ID=mRNA_M-pyrifera_M_contig11674.3467.1|Name=mRNA_M-pyrifera_M_contig11674.3467.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4545bp|location=Sequence derived from alignment at M-pyrifera_M_contig11674:4245..8789- (Macrocystis pyrifera P11B4 male)
ATGGCTACCCTTCCAGGAACAAGGAGGGCCCGTGGTGGATCTAACGATGA
ATTAGCAGCACTTCCGAAGCCGCCGGGGAGGTCTCCCCGATCTGCATCGA
CCCGGCGAGCGTCAGCGGTGCGTGGGCTTTGAGATAAACTCAGGGAGCAA
AGTGGTTTGATCCTCGAAATGACTGCTGATGTTGTGCGAAAATCATCGCT
GATCGACTTGGTGTCGCGTTGTCACTGGCAACCTGCCAAGAGTATTGACT
TGTTGTTGGATGACCGTTCTCCCTGGTGCTCGTATATATTGCCGGCTGCC
GAGAAATCGACTGCTATTTTTTCTTGTCCCAGATGGGACTGCTGCTGTGT
TGTACTACGTTTCTCCGACAACGGTAGTGCCGCTCTCGCTCTTTCTCGAC
GCTTGAGACTTGAGAGTCGTGGGAGGCGCAAAGAGGTGCGGTTGGTGTAT
ACATGTACCTGGTACGCAGGAAGTGTTGCCTTTTGGCCAACGGGCAATAC
AGCAGTAAGTATTGGTCTTCCGCGACGGTAACTGCCTCTCCTCCCCTCAT
GTGGTCCGTTCCACGAAAGCAATCATTTGCACATACTTCCGCTGTATAAA
ATGCCGGTACGAGCTATTCATGATACGCCGCAACCGTCCGTGCTGACAAC
GCCACACAGGTCGCCGAGGTAGCGGCCGCTGACGTTCTCACGGCCGAAGA
AGAGTACCTGCTCAAGATTTTTCGGCGATACCGCAAACACGAACCGGCGT
CTCCAGCAGCAAAAGCACCAGGCATCGACGGTAAGGCGCTGCCTCCGCCG
AACAGGCGGTGCCCGAGCCCAGTCCCCGACCGATCCAAAGCCCCTCTCTC
GGCGAAAGGAGGACTAGGCGCGGTCGGTTCCGCCGCCGTTGACAAGAAGG
GCAAACCTGGCCCAGGGGGTGATAAAGCGCCAGCCAAGAAGACTGACCAG
CAGCCTACCCCGCCTCCACCAAAAATGGACTTGCTCAGTCGGACGAAGAT
GATCTTGGAGCAGAAGCGGAAAGCCGCGGCTGCCGGGTTCACCAGGGCAG
GTTCCGCCGCTTCGGCGGGGGCTGGCGTGCAGAGGAAGGCGAAGATCAGC
AAGGCTGCTGGGGCGCATTCGTCGGGTGCTAGTGCCCGCCTGGATCCAGT
GAAGGTGACGTTCTGAAGTGTGCTGTAGATCGATGAGTGCACTAACATGA
ACCAACGGCCTCGAGTAAGTATGAAGAAACAGCCGCACGTGCAGTAGATA
CAGTAAGTAAACGCGACAGTAGTGTTAATTTTCCAGTGCCGAAGCGCAAA
CCGGCTTCGAGTGTTTTCGACTACAGAGGGCGGCAGCAGCAGTACAGCAG
TCACGAGTAAACACTCGCTGGCTGGTATAGCACGATGTAGAAAGGGAGCA
GCCGCGAGGTTGAAAGCTGTCGTTCCGCGATTGACAATTGGTACCCTCCC
CGAGTACTAGTAATCACTGCTGTGTCGTTTTGGGTCTTATTTTCTCTCGG
CAATCATGTCTAATAGGAGAGGGCGGTATTGCCACCTTGAAATACGCCTT
TTTACGTTACGATGTCAAGTTGAAAGCTCTAGCTTCCATCGCACATTGGT
AGCTACCGGGTACGTTCTTATCGCTGTTTCAACCCTCTTGCTTTTTTTTT
CTTTTTCTTTCGTGTCGCACCGCTTTTCCATCTCAGTACCCCACCTCTGG
CTTGCTATTAAAGCAAGAGTTCCGCACTTTCGAGGAAGGCGAGGAAGACG
GGGAGCGGGCTTACACGCCGGTGGATCCGCTCGTACGGAACCTTACCAAC
TTCGGACTGGCTGACGGCGATGTCGGCAAAAAACACCATGAGACGCTCGT
TATGCGCGTGACAGTTCCGGCGCACAGCCAGTCCTGGGGCGTCAACATTT
GTCCCAAGGAGCACTCAAACTTTCAAGAGATTTTGTTCCACTTTAACCCC
CGCCGGAGGTTCGTGGCGATGAACAATCGAGAAGACAACAACTGGGGGCA
ACAGGTGTGTTGTGTTCTGAGCTGGAGTCGCCATGGTGACGTTGACACTC
AACCTTGTGTGTTACGTCAAACGCCTGGGGATCGTGCGCCCCCCTCAGCC
CTTTTGTGCATCCACGATTGTTGCACCGTTTGCTAGTTGCATTTTTTCAT
GGTGCGGGACGCCGCCTCACGCGAAACGTCGGTTTACCTGCTACGTAAGA
CATGCCCACCTGAGATCTGGTATTGTGCTAATTGCGGACGATCGGCTGAA
TTCAATTTACGTCGACGGCTGATTTGCGCTTCTTTCATACCCGGTACCTG
CTAGTCATTACATAAGTTGCGACTCGTTGCGTAAGCTGCTCAGACTCTAC
GCGAAGCACCACGACGACTTCGTCCCCAAAACGCAATACGCACTCCGGCC
TCTCATACGGTTGTCATCTTGTGCACGTTTTTTTTTTCACCATGCACGCT
GTCGACTTGCGCGTAGCAAATCTCGAAACCGTACCAACGGGGTGCTCCCG
CCGCCTTTGTTGTCTCTGAAACAGGAGAAATACATGCTCCCGAGATGGCC
GGACATGTTCGACGTGTCGATTAACGTCGCCGTGCAAATAGACCGAGCAG
GCTTTCACGTCGCCGTGGACGGCAAGTACTGCGCCACATTCGCCCACCGA
GCGTGAGATAATTAAGGGCAAGACCATGGGTCTGATTTTACTACCCCTGA
GAGGGTGGGCGTGAGGGTGGGACGGCGGCGGGGGGAGGGGCAACTTCTTT
GAGTCTCATGCTCTTTCGGCGGTTGATATTTTCCCCGTTTTTTTCGCCCG
CTATATGGGTGTTACGTTGTGGTCGTTGGCCTTGCGCTCAAGAGGGCGGC
GCGTAACGGAAAACCCCGAAATCAGCCGTTTCTGCTTCAGTATTCTCGCG
CAAAGTCGTCTCCTACTGGTGTGCATGTCCATGGCCTGCGTGCCACGACA
TCGGATGGCGATCGTACTGTTCAATCGCGGCAATGCCATGATCTTCTGAC
GTGAAGGTATATAAAAATTCAGGGTAGTTCTCGCTCGGACTTGGCGCTGT
CGGCTAATTTTAACTGTCGTCAATGTGTGTACTGGCTGAAGAAAAAACTA
CAAATAACGTTTGTTCAAAGATTTTCGATCTGACGGCGCGGATCTCCGGT
CTCACATTTGTTTCTATAGGATCTCGTGTCTTCCGAGCTAGAAAGGGGCT
CCTACACATTTTTGGCGGCCGTGTAAATTAGCAACCCTGTACTTGAAACG
TCTTGTGTTTTACCCGGCTCTCGGACGACTATTTCCCTCTGCAGGAAGGT
GCCCCCAAATGGCGAAGACCTCGCGCTCGAGGTGATGACCGCCGACGACT
ACGGCACCAACCTGGGGCTGGTCGTGCACGAGATCTGGTGGGGGCATAAG
GACACGATGCCGGGCCTTCCGTGAGTGCCCGTGGTTCTGTGATTGCCCAA
CCGTGTACCGCCAGAGACATACATGGATAGTGTTGTGTTTTGAAGGAACC
TGCGCTCTGGGTGTGGTAATCATGCTACCACTACTGTAGGTATGTGTCGC
CCTCTTTTAGAGGAGCTGGTATAATTATGAGCAGTTTGTTTGCGCTGCAC
ACCCAGACCAGACTCGAGTATGGGGCACTTGCTGCTTAGCTCCCATAAAA
AATTAACGAACTGCATTTCAGCTGTAGGTGTGGTTTTGTTATTGAGGGTT
GACACAGAGAGACGCTATTCCTCCGTTTTTTCGACGTGGTTTCGACAGTG
GCGCGGCGAAGGAGCGCCAGCCTGCGCGGTCGGCGGACCCCTGGAGAGCC
GGGGAGAACGAGGACACGTACATCGACTTGCACGTCGGTAATCTCCCGAC
GATGCCCAGCCCCGAGCAGCAAGAGGCGGTACGGAAGAGGCTGTCGGACA
TGTTCCAGCCATACGGAGCCATCCAAGTCAGGGTTTTCTCGCGAGAGAAA
AACTTCGGGTGAGTGAGCCAGTCATCAGAATGACAGAAATCGCGGCGAAC
GATTTAAAATGATCTTTGATCAACAGTTGTGATTGGGTTCATTCTGTAAT
ATCTGCAATAGCGTCAGGGGAGATTCGACAGGCTGGAGCCCCCTGGGAGC
GCGAACCTGCAACCCTTTCTTGTCGCCAACGCATCCGGTCGGTGGTTATC
CGTGGCAGACAGTGGCGCCCTTTCGACGAAATTCCTTACACAAAATCGCT
TTCGCGCCTTCTCTTGGCCGCCAGGTTCATCAAGTTTCGCGATCACGGCA
GCGCAGCTAAAGCGCTTGAGGAACTAAGCGGTGCGGAGGTCCAAGGTCGG
ACCCTGAGGTTGTCTAGAGCTGCGGGTAGGTAGGAACCTTTCGTATACGC
CGTGACAGGAGTGAGAGCTGGGCGCGGCTTTCCGGGTGTCACTGCGCGGC
ATGATAGTTCTTGTCTCGAGCGTTAATCGCTTTACAACTGCAACCCACGG
TTTGGGGACAGAGTACTTGGAATTATAATTGACTAAAAAATGCAGTGGGT
CGAACTTCGTGGAAAGTTGGCGTGGACTTGTCCATATTCGGCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11674:4245..8789-

>mRNA_M-pyrifera_M_contig11674.3467.1 ID=mRNA_M-pyrifera_M_contig11674.3467.1|Name=mRNA_M-pyrifera_M_contig11674.3467.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3006bp|location=Sequence derived from alignment at M-pyrifera_M_contig11674:4245..8789- (Macrocystis pyrifera P11B4 male)
ATGGCTACCCTTCCAGGAACAAGGAGGGCCCGTGGTGGATCTAACGATGA
ATTAGCAGCACTTCCGAAGCCGCCGGGGAGGTCTCCCCGATCTGCATCGA
CCCGGCGAGCGTCAGCGATGGCTACCCTTCCAGGAACAAGGAGGGCCCGT
GGTGGATCTAACGATGAATTAGCAGCACTTCCGAAGCCGCCGGGGAGGTC
TCCCCGATCTGCATCGACCCGGCGAGCGTCAGCGGTCGCCGAGGTAGCGG
CCGCTGACGTTCTCACGGCCGAAGAAGAGTACCTGCTCAAGATTTTTCGG
CGATACCGCAAACACGAACCGGCGTCTCCAGCAGCAAAAGCACCAGGCAT
CGACGGTAAGGCGCTGCCTCCGCCGAACAGGCGGTGCCCGAGCCCAGTCC
CCGACCGATCCAAAGCCCCTCTCTCGGCGAAAGGAGGACTAGGCGCGGTC
GGTTCCGCCGCCGTTGACAAGAAGGGCAAACCTGGCCCAGGGGGTGATAA
AGCGCCAGCCAAGAAGACTGACCAGCAGCCTACCCCGCCTCCACCAAAAA
TGGACTTGCTCAGTCGGACGAAGATGATCTTGGAGCAGAAGCGGAAAGCC
GCGGCTGCCGGGTTCACCAGGGCAGGTTCCGCCGCTTCGGCGGGGGCTGG
CGTGCAGAGGAAGGCGAAGATCAGCAAGGCTGCTGGGGCGCATTCGTCGG
GTGCTAGTGCCCGCCTGGATCCAGTGAAGGTCGCCGAGGTAGCGGCCGCT
GACGTTCTCACGGCCGAAGAAGAGTACCTGCTCAAGATTTTTCGGCGATA
CCGCAAACACGAACCGGCGTCTCCAGCAGCAAAAGCACCAGGCATCGACG
GTAAGGCGCTGCCTCCGCCGAACAGGCGGTGCCCGAGCCCAGTCCCCGAC
CGATCCAAAGCCCCTCTCTCGGCGAAAGGAGGACTAGGCGCGGTCGGTTC
CGCCGCCGTTGACAAGAAGGGCAAACCTGGCCCAGGGGGTGATAAAGCGC
CAGCCAAGAAGACTGACCAGCAGCCTACCCCGCCTCCACCAAAAATGGAC
TTGCTCAGTCGGACGAAGATGATCTTGGAGCAGAAGCGGAAAGCCGCGGC
TGCCGGGTTCACCAGGGCAGGTTCCGCCGCTTCGGCGGGGGCTGGCGTGC
AGAGGAAGGCGAAGATCAGCAAGGCTGCTGGGGCGCATTCGTCGGGTGCT
AGTGCCCGCCTGGATCCAGTGAAGTACCCCACCTCTGGCTTGCTATTAAA
GCAAGAGTTCCGCACTTTCGAGGAAGGCGAGGAAGACGGGGAGCGGGCTT
ACACGCCGGTGGATCCGCTCGTACGGAACCTTACCAACTTCGGACTGGCT
GACGGCGATGTCGGCAAAAAACACCATGAGACGCTCGTTATGCGCGTGAC
AGTTCCGGCGCACAGCCAGTCCTGGGGCGTCAACATTTGTCCCAAGGAGC
ACTCAAACTTTCAAGAGATTTTGTTCCACTTTAACCCCCGCCGGAGGTTC
GTGGCGATGAACAATCGAGAAGACAACAACTGGGGGCAACAGTACCCCAC
CTCTGGCTTGCTATTAAAGCAAGAGTTCCGCACTTTCGAGGAAGGCGAGG
AAGACGGGGAGCGGGCTTACACGCCGGTGGATCCGCTCGTACGGAACCTT
ACCAACTTCGGACTGGCTGACGGCGATGTCGGCAAAAAACACCATGAGAC
GCTCGTTATGCGCGTGACAGTTCCGGCGCACAGCCAGTCCTGGGGCGTCA
ACATTTGTCCCAAGGAGCACTCAAACTTTCAAGAGATTTTGTTCCACTTT
AACCCCCGCCGGAGGTTCGTGGCGATGAACAATCGAGAAGACAACAACTG
GGGGCAACAGGAGAAATACATGCTCCCGAGATGGCCGGACATGTTCGACG
TGTCGATTAACGTCGCCGTGCAAATAGACCGAGCAGGCTTTCACGTCGCC
GTGGACGGCAAGTACTGCGCCACATTCGCCCACCGAGCGAGAAATACATG
CTCCCGAGATGGCCGGACATGTTCGACGTGTCGATTAACGTCGCCGTGCA
AATAGACCGAGCAGGCTTTCACGTCGCCGTGGACGGCAAGTACTGCGCCA
CATTCGCCCACCGAGCGAAGGTGCCCCCAAATGGCGAAGACCTCGCGCTC
GAGGTGATGACCGCCGACGACTACGGCACCAACCTGGGGCTGGTCGTGCA
CGAGATCTGGTGGGGGCATAAGGACACGATGCCGGGCCTTCCGAAGGTGC
CCCCAAATGGCGAAGACCTCGCGCTCGAGGTGATGACCGCCGACGACTAC
GGCACCAACCTGGGGCTGGTCGTGCACGAGATCTGGTGGGGGCATAAGGA
CACGATGCCGGGCCTTCCTGGCGCGGCGAAGGAGCGCCAGCCTGCGCGGT
CGGCGGACCCCTGGAGAGCCGGGGAGAACGAGGACACGTACATCGACTTG
CACGTCGGTAATCTCCCGACGATGCCCAGCCCCGAGCAGCAAGAGGCGGT
ACGGAAGAGGCTGTCGGACATGTTCCAGCCATACGGAGCCATCCAAGTCA
GGGTTTTCTCGCGAGAGAAAAACTTCGGTGGCGCGGCGAAGGAGCGCCAG
CCTGCGCGGTCGGCGGACCCCTGGAGAGCCGGGGAGAACGAGGACACGTA
CATCGACTTGCACGTCGGTAATCTCCCGACGATGCCCAGCCCCGAGCAGC
AAGAGGCGGTACGGAAGAGGCTGTCGGACATGTTCCAGCCATACGGAGCC
ATCCAAGTCAGGGTTTTCTCGCGAGAGAAAAACTTCGGGTTCATCAAGTT
TCGCGATCACGGCAGCGCAGCTAAAGCGCTTGAGGAACTAAGCGGTGCGG
AGGTCCAAGGTCGGACCCTGAGGTTGTCTAGAGCTGCGGGTAGGTAGGTT
CATCAAGTTTCGCGATCACGGCAGCGCAGCTAAAGCGCTTGAGGAACTAA
GCGGTGCGGAGGTCCAAGGTCGGACCCTGAGGTTGTCTAGAGCTGCGGGT
AGGTAG
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