mRNA_M-pyrifera_M_contig116691.3457.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116691.3457.1
Unique NamemRNA_M-pyrifera_M_contig116691.3457.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: W9KPB9_FUSOX (Protein SSH4 n=8 Tax=Fusarium oxysporum TaxID=5507 RepID=W9KPB9_FUSOX)

HSP 1 Score: 62.8 bits (151), Expect = 3.610e-8
Identity = 47/152 (30.92%), Postives = 67/152 (44.08%), Query Frame = 1
Query:   73 PNIPDENGDCPLHYAAQEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEGFLELTESPL--LVEPSYLHNLTPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEY 522
            P + D  G  P+H AA+EG  ++++                                  F EL++     +   S    +T LHL ARS +     ++    K L+SKPD++GR PLHIAAK  N   A +LLE GA    +D   RTP +Y
Sbjct: 1105 PRLVDNLGRSPIHIAAREGMHQSLE--------------------------------RVFEELSDEGKRHVARASGFDGMTYLHLIARSGNLDCLKLITPWVKPLLSKPDSWGRQPLHIAAKFENYDFALKLLEMGARFDQVDETGRTPVDY 1224          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: UPI001EDD0696 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=3 Tax=Daphnia TaxID=6668 RepID=UPI001EDD0696)

HSP 1 Score: 59.3 bits (142), Expect = 5.580e-7
Identity = 47/167 (28.14%), Postives = 73/167 (43.71%), Query Frame = 1
Query:   43 IERLLERGANPNIPDENGDCPLHYAAQEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEGFLELTESPLLVEPSYLHNLTPLHLAARS-ESKSVFDILLAVDKSL----VSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYAA 528
            +++LLE+GANPN+ D+ G  PLH AAQ+   +AI                               V+    +L E    +       L+ LH+AA+  +   + D+LL   K      V+  +  G T LH AA + N++ A  L+ +GAD    + +  TP   AA
Sbjct:  327 VQKLLEKGANPNVSDKKGRSPLHLAAQQRDDDAIIDFFLAHCKVRVDDVDVKGQTALHLAVVASNVI-AVKKLIEKGANLSIFDKEGLSVLHVAAQERDGNPIIDLLLEAQKVKGMGDVNDQNENGWTALHYAAFKSNEITAEHLINKGADLHCRNNYGDTPLHMAA 492          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: UPI001EEB8BF4 (uncharacterized protein LOC124315033 isoform X1 n=2 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB8BF4)

HSP 1 Score: 59.3 bits (142), Expect = 5.690e-7
Identity = 48/155 (30.97%), Postives = 73/155 (47.10%), Query Frame = 1
Query:   40 LIERLLERGANPNIPDENGDCPLHYAA--QEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-VEGFLELTESPLLVEPSYLHNLTPLHLAA-RSESKSVFDILLAVDKSL----VSKPDAYGRTPLHIAAKEGNDMIASRLLEEGAD 480
            + ++LLERGANPNI D+ G  PLH AA  ++G +  ID+                             + V+  +E   +P L +     +L+PLH+AA +     + D+LL   K      V+  +  GRT LH AA   N++    L+E+GAD
Sbjct:  889 IFQKLLERGANPNIFDKIGRSPLHVAALDRDG-IPVIDLLLAHPKVKVDDVNEFGITALHAAAYASNVIAVKRLIEKGANPNLFDKD---DLSPLHVAALQKNGNPMIDLLLEAQKVKGLGDVNNQNKQGRTALHYAAAYSNEITTEHLIEKGAD 1039          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: A0A1Y2B363_9TREE (Ankyrin repeat-containing domain protein n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2B363_9TREE)

HSP 1 Score: 58.2 bits (139), Expect = 5.890e-7
Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 1
Query:  310 PLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYA 525
            P+H A   ES      LL  D SL++  DAYG TPLH+AA  G+  IA  LLE GADR   D   +TP + A
Sbjct:  158 PIHDAIIDESIDEVRRLLDRDPSLINARDAYGNTPLHLAADRGHIAIALVLLEAGADRNLTDEDGQTPLQLA 229          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: A0A2H9SK57_9BACT (Uncharacterized protein n=1 Tax=Parachlamydia sp. TaxID=2052048 RepID=A0A2H9SK57_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 9.000e-7
Identity = 49/162 (30.25%), Postives = 71/162 (43.83%), Query Frame = 1
Query:   10 ALQRPEPSVALIERLLERGANPNIPDENGDCPLHYAAQEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEGFLELTESPLLVEPSYLHNLTPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALD 495
            AL+  +  VA +  LLE+GANPN+PD++G+ PLHYA +   LE                                 +V+  L       + +     NL PLH A R  +  +   L+A  K+L +K  +   TPL IA KEG+      LL+ GA  +  D
Sbjct:  463 ALKNKQSEVAKL--LLEKGANPNLPDKDGNLPLHYAVKNNDLELSRSLAAVTQDLNKVGAYAESHLLMAAKQGNHALVKVLLAKGADADMADKQ--GNL-PLHRALRGNNVELVADLIAATKNL-NKSGSINETPLLIAIKEGSPTFLEMLLKGGAKLSPAD 618          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: UPI001EECD0D8 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EECD0D8)

HSP 1 Score: 57.8 bits (138), Expect = 1.830e-6
Identity = 53/175 (30.29%), Postives = 77/175 (44.00%), Query Frame = 1
Query:   31 SVALIERLLERGANPNIPDENGDCPLHYAAQEGCLEAI-DVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-VEGFLELTESPLLVEPSYLHNLTPLHLAA-RSESKSVFDILLAVDKSL----VSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYAAEG 534
            +V   ++LLE+GANPNI    G  PLH AA +   +A+ D+                             + V+  LE   +P  V  S     +PLH+AA + +   + D+LL   K      V+  D  G T LH AA   N++ A  L+++GAD    D    TP + AA G
Sbjct:  413 NVVAAQKLLEKGANPNIFANKGVSPLHVAATQSDGDAMFDLLLAHDKINVDDVDEHGFTALHWAALASNVIAVQKLLEKGANPNAVGKS---GDSPLHVAATQRDGIPIIDLLLEAQKVKGLGDVNDRDKEGWTALHYAAAYSNEITAEHLIKKGADLHCRDNDGLTPLDMAALG 584          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: UPI000C03E923 (ankyrin repeat and EF-hand domain-containing protein 1-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03E923)

HSP 1 Score: 56.6 bits (135), Expect = 3.610e-6
Identity = 47/169 (27.81%), Postives = 71/169 (42.01%), Query Frame = 1
Query:   43 IERLLERGANPNIPDENGDCPLHYAAQEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEGFLELTESPLLVEPSYLHNLTPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYAAEGHHTGV 549
            ++ L++RGA+P++ D+ G   LH+AAQ G  + ID+                              V+ FLE  E+   V+    H L   H AA+  +  V D++      + S   A G  PL +AA  G        LE+G + T +D        +AAEG  T V
Sbjct:   26 VKGLIKRGADPSLMDKGGWIALHFAAQGGNTDFIDLIHAHLPDIESKTAEGHTPLMVAAFTGKLHAVKWFLEKGENVTCVDNRRWHML---HFAAQGGNTDVIDLIHTFWPDIESNT-AEGYIPLMVAALTGKLHAVKWFLEKGPNVTCVDNRRWNMLHFAAEGGDTDV 190          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: A0A1A5ZY42_9TREE (Cyclin-dependent protein kinase inhibitor n=2 Tax=Kwoniella TaxID=490731 RepID=A0A1A5ZY42_9TREE)

HSP 1 Score: 56.2 bits (134), Expect = 6.100e-6
Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  238 VVEGFLELTESPLLVEPSYLHNL---TPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYA-AEGH 537
            V +G+L+L  + + ++  Y+ N+   +P H A+   S  +  +    +++L+ KPDAY R P+H A+  G+  I S LL +G D +  D    TP  +A  +GH
Sbjct:  373 VPKGYLDLVLNNVKLDYGYVDNINGRSPAHQASILGSLPLIKLCAENNRTLLEKPDAYDRRPIHYASMHGHAEIVSFLLSQGVDPSTTDKDGYTPLMHAITQGH 476          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: W3XCZ3_PESFW (Uncharacterized protein n=1 Tax=Pestalotiopsis fici (strain W106-1 / CGMCC3.15140) TaxID=1229662 RepID=W3XCZ3_PESFW)

HSP 1 Score: 55.5 bits (132), Expect = 9.690e-6
Identity = 51/174 (29.31%), Postives = 70/174 (40.23%), Query Frame = 1
Query:   40 LIERLLERGANPNIPDENGDCPLHYAAQEGCLEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VVEGFLELTESPLLVEPSYLHNLTPLHLAARSESKSVFDILLAV-DKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYAA-EGHHTGVA 552
            ++  LLE GA+P   D      LHYAA  G  +   +                              V + F   + + LLV+       TPLH+A+      +   LL   D   +   DA+GRTPL +AA+ GN    + LL  GAD T  D    TP E A   G+H  V+
Sbjct:  334 IVRTLLELGADPKAQDNQKRNALHYAAGCGQKDTTRLLLSHYPSLCTATDWHGYTPFHAAINHGHLEVAKMFASTSGTVLLVDEG-----TPLHIASMKGHVPLISWLLDERDAGTIDWKDAFGRTPLSLAARSGNLDAVNLLLSRGADFTIADENGNTPCEVARIYGYHDIVS 502          
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Match: A0A1B9H7I6_9TREE (Cyclin-dependent protein kinase inhibitor n=2 Tax=Kwoniella heveanensis TaxID=89924 RepID=A0A1B9H7I6_9TREE)

HSP 1 Score: 55.5 bits (132), Expect = 1.120e-5
Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 1
Query:  238 VVEGFLELTESPLLVEPSYLHNL---TPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMIASRLLEEGADRTALDCFDRTPAEYAAEGHHTGV 549
            V E  L+L  + + ++ +Y+ N+   +PLH A  + S  +  + +  + SL+ +PDAY R P+H AA  G+  I S LL+  AD +  D    TP  +A    H  V
Sbjct:  357 VPEAHLDLVLNAIRLDYNYIDNINGRSPLHQACIAGSLRLVQLCVEHNLSLLERPDAYDRRPIHYAALHGHPFIVSYLLQS-ADSSVTDMDGYTPLMHAITHGHLEV 462          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116691.3457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
W9KPB9_FUSOX3.610e-830.92Protein SSH4 n=8 Tax=Fusarium oxysporum TaxID=5507... [more]
UPI001EDD06965.580e-728.14serine/threonine-protein phosphatase 6 regulatory ... [more]
UPI001EEB8BF45.690e-730.97uncharacterized protein LOC124315033 isoform X1 n=... [more]
A0A1Y2B363_9TREE5.890e-747.22Ankyrin repeat-containing domain protein n=1 Tax=N... [more]
A0A2H9SK57_9BACT9.000e-730.25Uncharacterized protein n=1 Tax=Parachlamydia sp. ... [more]
UPI001EECD0D81.830e-630.29serine/threonine-protein phosphatase 6 regulatory ... [more]
UPI000C03E9233.610e-627.81ankyrin repeat and EF-hand domain-containing prote... [more]
A0A1A5ZY42_9TREE6.100e-631.73Cyclin-dependent protein kinase inhibitor n=2 Tax=... [more]
W3XCZ3_PESFW9.690e-629.31Uncharacterized protein n=1 Tax=Pestalotiopsis fic... [more]
A0A1B9H7I6_9TREE1.120e-532.71Cyclin-dependent protein kinase inhibitor n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116691contigM-pyrifera_M_contig116691:3..554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size552
Cds size552
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815683.7017066-CDS-M-pyrifera_M_contig116691:2..5541622815683.7017066-CDS-M-pyrifera_M_contig116691:2..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116691 3..554 +
1692277520.2946463-CDS-M-pyrifera_M_contig116691:2..5541692277520.2946463-CDS-M-pyrifera_M_contig116691:2..554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116691 3..554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116691.3457.1prot_M-pyrifera_M_contig116691.3457.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116691 3..554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116691.3457.1

>prot_M-pyrifera_M_contig116691.3457.1 ID=prot_M-pyrifera_M_contig116691.3457.1|Name=mRNA_M-pyrifera_M_contig116691.3457.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp
LHWALQRPEPSVALIERLLERGANPNIPDENGDCPLHYAAQEGCLEAIDV
LLMAGADATRVNEQGFSPFHLACQVGQREVVEGFLELTESPLLVEPSYLH
NLTPLHLAARSESKSVFDILLAVDKSLVSKPDAYGRTPLHIAAKEGNDMI
ASRLLEEGADRTALDCFDRTPAEYAAEGHHTGVA
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mRNA from alignment at M-pyrifera_M_contig116691:3..554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116691.3457.1 ID=mRNA_M-pyrifera_M_contig116691.3457.1|Name=mRNA_M-pyrifera_M_contig116691.3457.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig116691:3..554+ (Macrocystis pyrifera P11B4 male)
CTCCACTGGGCTCTGCAGCGGCCGGAGCCGTCGGTGGCCCTTATCGAGAG GCTTCTCGAGCGCGGTGCGAACCCCAACATTCCAGACGAGAACGGCGACT GCCCGCTCCACTATGCGGCGCAGGAGGGTTGTTTGGAGGCGATCGACGTC CTCTTGATGGCTGGCGCCGACGCCACCCGAGTGAACGAGCAGGGCTTTTC TCCCTTCCACCTCGCCTGCCAGGTTGGCCAGCGAGAGGTGGTTGAGGGCT TCCTTGAGTTGACCGAGTCGCCTCTGTTGGTCGAGCCTTCCTATCTGCAC AACCTTACACCCCTCCACCTCGCTGCGAGGTCGGAGTCCAAGTCTGTCTT TGACATTCTCCTCGCGGTGGACAAGAGCCTCGTGAGCAAGCCAGACGCCT ATGGGCGCACTCCCCTCCACATTGCTGCCAAGGAAGGCAACGACATGATC GCCAGCCGCCTCCTCGAGGAAGGCGCCGACCGCACTGCCCTCGATTGCTT CGACAGAACCCCTGCCGAGTATGCCGCGGAAGGCCACCACACTGGCGTGG CC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116691:3..554+

>mRNA_M-pyrifera_M_contig116691.3457.1 ID=mRNA_M-pyrifera_M_contig116691.3457.1|Name=mRNA_M-pyrifera_M_contig116691.3457.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig116691:3..554+ (Macrocystis pyrifera P11B4 male)
CTCCACTGGGCTCTGCAGCGGCCGGAGCCGTCGGTGGCCCTTATCGAGAG
GCTTCTCGAGCGCGGTGCGAACCCCAACATTCCAGACGAGAACGGCGACT
GCCCGCTCCACTATGCGGCGCAGGAGGGTTGTTTGGAGGCGATCGACGTC
CTCTTGATGGCTGGCGCCGACGCCACCCGAGTGAACGAGCAGGGCTTTTC
TCCCTTCCACCTCGCCTGCCAGGTTGGCCAGCGAGAGGTGGTTGAGGGCT
TCCTTGAGTTGACCGAGTCGCCTCTGTTGGTCGAGCCTTCCTATCTGCAC
AACCTTACACCCCTCCACCTCGCTGCGAGGTCGGAGTCCAAGTCTGTCTT
TGACATTCTCCTCGCGGTGGACAAGAGCCTCGTGAGCAAGCCAGACGCCT
ATGGGCGCACTCCCCTCCACATTGCTGCCAAGGAAGGCAACGACATGATC
GCCAGCCGCCTCCTCGAGGAAGGCGCCGACCGCACTGCCCTCGATTGCTT
CGACAGAACCCCTGCCGAGTATGCCGCGGAAGGCCACCACACTGGCGTGG
CCCTCCACTGGGCTCTGCAGCGGCCGGAGCCGTCGGTGGCCCTTATCGAG
AGGCTTCTCGAGCGCGGTGCGAACCCCAACATTCCAGACGAGAACGGCGA
CTGCCCGCTCCACTATGCGGCGCAGGAGGGTTGTTTGGAGGCGATCGACG
TCCTCTTGATGGCTGGCGCCGACGCCACCCGAGTGAACGAGCAGGGCTTT
TCTCCCTTCCACCTCGCCTGCCAGGTTGGCCAGCGAGAGGTGGTTGAGGG
CTTCCTTGAGTTGACCGAGTCGCCTCTGTTGGTCGAGCCTTCCTATCTGC
ACAACCTTACACCCCTCCACCTCGCTGCGAGGTCGGAGTCCAAGTCTGTC
TTTGACATTCTCCTCGCGGTGGACAAGAGCCTCGTGAGCAAGCCAGACGC
CTATGGGCGCACTCCCCTCCACATTGCTGCCAAGGAAGGCAACGACATGA
TCGCCAGCCGCCTCCTCGAGGAAGGCGCCGACCGCACTGCCCTCGATTGC
TTCGACAGAACCCCTGCCGAGTATGCCGCGGAAGGCCACCACACTGGCGT
GGCC
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