mRNA_M-pyrifera_M_contig116539.3438.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A6L8EK47_9GAMM (TonB-dependent receptor plug domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EK47_9GAMM) HSP 1 Score: 215 bits (547), Expect = 1.820e-62 Identity = 111/193 (57.51%), Postives = 135/193 (69.95%), Query Frame = 1
Query: 1 NRLSGD-DLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGV------PGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL D DLNNANDYAGRVQLL+EP+E L N RYSLQQIRTGFFEN + + P+TG+ GN GY D+DGDV+AGDYD+LG NDLETYG SGT K+ FD T ITD+Q+V+RDY+EDSDA+PFNDFNF+L+TD+ Q+SQE RL+G+T++ WVAGFYYL+I
Sbjct: 222 NRLDPDNDLNNANDYAGRVQLLFEPSEDVSLLLNGRYSLQQIRTGFFENVDA----------------------VVDPVTGLVVKTPGAGNFTGYTDSDGDVFAGDYDRLGFNDLETYGMSGTLKWSFDAATLTGITDFQSVERDYLEDSDAAPFNDFNFYLTTDAEQFSQELRLNGETERTQWVAGFYYLEI 392
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A6L8EHA0_9GAMM (TonB-dependent receptor plug domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EHA0_9GAMM) HSP 1 Score: 209 bits (531), Expect = 5.790e-60 Identity = 115/187 (61.50%), Postives = 131/187 (70.05%), Query Frame = 1
Query: 1 NRLS-GDDLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL G+DLNNANDYAGR+QLL+EPNE L NARYSLQ+IRTGFFEN S L GN GV N + N NGY D+DGD +AGDYDKLGHNDLETYGF+GT K+ T + D Q V+RDYIEDSDASP DFNFFL+TD+ QWS E RL G+TD+L WVAG+YYLDI
Sbjct: 202 NRLDPGNDLNNANDYAGRMQLLFEPNEDFSLLLNARYSLQEIRTGFFENVSGS-LDEVGN--------GVKEDNCA-----LYTNFNGYCDDDGDNFAGDYDKLGHNDLETYGFTGTLKWQLGDNLLTVVVDRQGVERDYIEDSDASPHADFNFFLNTDAEQWSTEVRLDGETDRLRWVAGYYYLDI 374
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: UPI0011057741 (TonB-dependent receptor n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI0011057741) HSP 1 Score: 199 bits (507), Expect = 1.460e-56 Identity = 108/187 (57.75%), Postives = 129/187 (68.98%), Query Frame = 1
Query: 1 NRLSGDD-LNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL D LNNAN+YAGR+QLL+EP+E +FL NAR Q IRTGFFEN S+ P GN TP P T NL+ Y DNDGDV+AGDYD+ G NDLETYGF+GT +D + TSITDYQ+V RDYIEDSDASP N FNFFL+TD+ Q+S+E RL G+T+ L WV GFYY+ +
Sbjct: 243 NRLKPDQKLNNANEYAGRLQLLFEPSETVDFLLNARIGKQDIRTGFFENVSA--AFPDGNLTPTVPIT----------------NLDNYLDNDGDVFAGDYDRTGKNDLETYGFTGTLNWDMEFATLTSITDYQSVTRDYIEDSDASPVNYFNFFLTTDAEQFSEELRLAGETETLKWVTGFYYMSL 411
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A2A5BYS3_9PROT (Ligand-gated channel n=2 Tax=root TaxID=1 RepID=A0A2A5BYS3_9PROT) HSP 1 Score: 198 bits (504), Expect = 3.530e-56 Identity = 109/187 (58.29%), Postives = 132/187 (70.59%), Query Frame = 1
Query: 1 NRLSGDD-LNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL D LNNAN+ AGR+Q+L+ PNE E L NAR+ Q IRTGFFEN S++ P G VLTP PIT NL+ Y DNDGDV+AGDYD G N L+TYGF+GT K+D D + TSITDYQ+V R+YIEDSDASPF FNFFL+TD+ Q+SQE RL G+T+K+ WV GFYY+D+
Sbjct: 233 NRLQPDKKLNNANETAGRLQVLFTPNEDVEILLNARFGQQDIRTGFFENVSAE--NPDG----------VLTPTV--PIT----NLDNYLDNDGDVFAGDYDSPGRNKLKTYGFTGTLKWDLDGMELTSITDYQSVNRNYIEDSDASPFKYFNFFLTTDAKQFSQELRLSGETEKMKWVTGFYYMDL 401
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A3A0EW42_9PROT (Ligand-gated channel n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EW42_9PROT) HSP 1 Score: 194 bits (494), Expect = 9.440e-55 Identity = 104/181 (57.46%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 16 DDLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
DDLNNAN+ AGR+Q L++PNE E L NAR+ Q IRTGFFE S+ + P G TP GV P +L GY D D DVYAGDYD GHN+L+TYG+SGT K++ D TSITD+Q VKRDYIEDSDASP + F FFL+TD+ Q+SQE RL+G+ DKL WVAGFYY+D+
Sbjct: 225 DDLNNANESAGRLQALFQPNEDVEILLNARFGQQDIRTGFFEYASA--IFPTGEATP-----GVPNP-----------DLGGYVDLDDDVYAGDYDTPGHNELDTYGYSGTLKWNMDFATLTSITDFQTVKRDYIEDSDASPVDYFQFFLTTDTEQFSQEIRLNGEADKLKWVAGFYYMDL 387
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A3M1JZQ2_9PROT (TonB-dependent receptor n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JZQ2_9PROT) HSP 1 Score: 193 bits (491), Expect = 1.780e-54 Identity = 106/187 (56.68%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 1 NRLSGD-DLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL+ + DLNNAN+ AGR+Q L+ P E E L N R+ Q IRTGFFE S+ + P G+ TP GV P + GY DNDGDVYAGDYD LGHNDL+T G+SGT K+ D TSITDYQ VKRDYIEDSDASP + FNFFL+TD+ Q+SQE R++GQT+ ++WVAGFYY+D+
Sbjct: 195 NRLNPEQDLNNANESAGRLQALFAPTEDLEVLLNVRFGQQDIRTGFFEYSSA--VLPTGDRTP-----GVPNP-----------DFGGYVDNDGDVYAGDYDFLGHNDLDTRGYSGTIKWSQDWGTITSITDYQTVKRDYIEDSDASPVDYFNFFLTTDAEQFSQELRVNGQTEDVEWVAGFYYMDL 363
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: UPI0018836DC3 (TonB-dependent receptor n=1 Tax=Kordiimonas pumila TaxID=2161677 RepID=UPI0018836DC3) HSP 1 Score: 189 bits (480), Expect = 8.130e-53 Identity = 102/180 (56.67%), Postives = 115/180 (63.89%), Query Frame = 1
Query: 19 DLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
DLNNAN++AGRVQLL+ PNE + L NARY Q IRTGFFE S+ + P TP +P + NL GY D DGDVYAGDYD G NDL T G S T + TSITDYQ VKRDYIEDSDASP N FNFFL+TD Q+SQE RL G TD +WV GFYYLD+
Sbjct: 226 DLNNANEFAGRVQLLYTPNEDFDLLLNARYGSQDIRTGFFEYVSA--INPDATPTPTEPNS----------------NLGGYNDTDGDVYAGDYDFAGRNDLSTKGLSATINWQIGDIKLTSITDYQQVKRDYIEDSDASPVNYFNFFLTTDVEQFSQELRLSGGTDNFNWVTGFYYLDL 387
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A1G0JY06_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0JY06_9GAMM) HSP 1 Score: 187 bits (476), Expect = 2.590e-52 Identity = 98/186 (52.69%), Postives = 121/186 (65.05%), Query Frame = 1
Query: 1 NRLSGDDLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NR SG+D+NN+NDYAGR+Q L EPNE + L NAR S Q+IRTGF+EN S+ PL LTP+ N NGY D DGDV+ GDYD+LG D T+G + + F+ FTSITD+Q V RDY+EDSDASP DFNF+L TD+ Q+SQE RL G+TD+ WV GFY LD+
Sbjct: 207 NRFSGEDINNSNDYAGRLQFLIEPNESVDILLNARGSFQEIRTGFWENVSTDPLS-------------NLTPDAT--------NFNGYRDGDGDVFEGDYDRLGFQDAHTWGTTANINFYFENMTFTSITDWQRVYRDYVEDSDASPLPDFNFYLVTDARQFSQEFRLSGETDRSRWVGGFYLLDV 371
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A2A5C6F0_9PROT (Ligand-gated channel n=2 Tax=root TaxID=1 RepID=A0A2A5C6F0_9PROT) HSP 1 Score: 186 bits (473), Expect = 8.080e-52 Identity = 102/187 (54.55%), Postives = 124/187 (66.31%), Query Frame = 1
Query: 1 NRLSGD-DLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPGNLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL D LNNAN+ AGR+Q L+ PNE E L NAR+ Q IRTGFFEN S++ P G TP P T L GY DNDG+V+AGDYD G N L+TYGFSGT +D + TSITD+Q+VKR+YIEDSDASP FNFFL+TD+ Q+SQE RL G+T+ + WV GFYY+D+
Sbjct: 228 NRLQPDRKLNNANETAGRLQFLFTPNEDVEILLNARFGQQDIRTGFFENVSAE--NPDGVLTPTVPNT----------------TLGGYLDNDGNVFAGDYDSPGRNKLDTYGFSGTVNWDLGWAELTSITDFQSVKRNYIEDSDASPVKFFNFFLTTDAQQFSQEFRLAGETENMKWVGGFYYMDL 396
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Match: A0A501PF91_9PROT (TonB-dependent receptor n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PF91_9PROT) HSP 1 Score: 186 bits (471), Expect = 1.730e-51 Identity = 103/188 (54.79%), Postives = 130/188 (69.15%), Query Frame = 1
Query: 1 NRLSGDD-LNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSSQPLGPFGNNTPPQPRTGVLTPNTIQPITGVPG-NLNGYEDNDGDVYAGDYDKLGHNDLETYGFSGTFKYDFDMFDFTSITDYQAVKRDYIEDSDASPFNDFNFFLSTDSVQWSQEARLHGQTDKLDWVAGFYYLDI 558
NRL D LNNAN+ AGR+Q L++P ++ E L NAR+ Q IRTGFFE +S+ + P G+ TP GVP +L+GY D DGD +AGDY++ GHN L+T G++ T K+D D TSITDYQ VKRDYIEDSDASPF+ FNFFL+TDS Q+SQE RL+G+TD L WV GFYY+D+
Sbjct: 225 NRLKPDSKLNNANESAGRLQALFQPTDELEILLNARFGQQDIRTGFFEYESA--VLPTGDATP-----------------GVPNVDLDGYVDLDGDNFAGDYNRQGHNILDTEGYTATIKWDQDWGTLTSITDYQTVKRDYIEDSDASPFDYFNFFLTTDSEQFSQELRLNGETDNLKWVTGFYYMDL 393 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116539.3438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116539.3438.1 >prot_M-pyrifera_M_contig116539.3438.1 ID=prot_M-pyrifera_M_contig116539.3438.1|Name=mRNA_M-pyrifera_M_contig116539.3438.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp NRLSGDDLNNANDYAGRVQLLWEPNEQSEFLFNARYSLQQIRTGFFENKSback to top mRNA from alignment at M-pyrifera_M_contig116539:2..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116539.3438.1 ID=mRNA_M-pyrifera_M_contig116539.3438.1|Name=mRNA_M-pyrifera_M_contig116539.3438.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116539:2..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116539:2..559+ >mRNA_M-pyrifera_M_contig116539.3438.1 ID=mRNA_M-pyrifera_M_contig116539.3438.1|Name=mRNA_M-pyrifera_M_contig116539.3438.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116539:2..559+ (Macrocystis pyrifera P11B4 male)back to top |