mRNA_M-pyrifera_M_contig116533.3435.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116533.3435.1
Unique NamemRNA_M-pyrifera_M_contig116533.3435.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A7S4I6J3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I6J3_9EUKA)

HSP 1 Score: 175 bits (444), Expect = 5.670e-49
Identity = 79/135 (58.52%), Postives = 97/135 (71.85%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEM 405
            E++++A  AL  AN + N C LD+P T+  A    +EYF S E    SG EL+A+GHCHIDTAWLWPY ETKRKCARSW +QLR+ME YP YKF CSQAQQ  W++  YP LF E+    + G+FIP+GGTWVEM
Sbjct:  199 ENTWEAAEALRVANKMINCCCLDNPATYATASSVADEYFQS-ERGRNSGFELTAVGHCHIDTAWLWPYAETKRKCARSWATQLRIMERYPKYKFACSQAQQYAWVQQDYPGLFTEIQNAVTNGNFIPVGGTWVEM 332          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A433PY37_9FUNG (Glycosyl hydrolases family 38 N-terminal domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PY37_9FUNG)

HSP 1 Score: 156 bits (395), Expect = 3.480e-43
Identity = 76/135 (56.30%), Postives = 92/135 (68.15%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEM 405
            +DS +A  AL AAN I N   ++D T+   A +  +E+F +      S   L+A+GHCHIDTAWLWPY ET+RK ARSW SQLRLME +P Y F CSQAQQ +WL+  YPSLF E+ EK   G F PIGGTWVEM
Sbjct:   57 QDSVRAAQALYAANKIVNTIKVEDETSLHDAAEIAKEFFGNKNGT--SQHSLTAVGHCHIDTAWLWPYAETRRKIARSWSSQLRLMEQHPEYVFVCSQAQQYEWLEQDYPSLFEEVKEKVKEGRFQPIGGTWVEM 189          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A8J6KD31_ELECQ (Alpha-mannosidase n=3 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6KD31_ELECQ)

HSP 1 Score: 158 bits (399), Expect = 3.670e-42
Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG 411
            ED+ ++  AL  AN + N C ++DP TF +  K   E+FS       S   L A+GHCHIDTAWLWPY+ET RKCARSW + ++LM T P + FTCSQAQQLDW+KT YP L+ ++ E    G FIP+GGTWVEM G
Sbjct:  208 EDNQRSFQALYVANQMVNLCDVNDPGTFAVVRKLSSEFFSQKNG--DSQHTLHAMGHCHIDTAWLWPYEETIRKCARSWVTAVQLMTTNPDFTFTCSQAQQLDWVKTRYPGLYSQIKEFVKLGQFIPVGGTWVEMDG 342          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A822EI21_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822EI21_9NEOB)

HSP 1 Score: 152 bits (383), Expect = 7.850e-42
Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG 411
            ED+ ++  AL  AN + N C ++DP TF    K   ++FS       S   + A+GHCHID+AWLWPY+ET RKCARSW + ++LM   PS+ FTCSQAQQLDW+KT YP L+ ++ E    G FIP+GGTWVEM G
Sbjct:  208 EDNQRSFQALYVANQMVNLCDVNDPGTFATVRKLSAKFFSQRNG--DSQHTIHAMGHCHIDSAWLWPYEETIRKCARSWVTAVQLMTKNPSFTFTCSQAQQLDWVKTWYPGLYSQIKEFVKLGQFIPVGGTWVEMDG 342          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A2P6MWF8_9EUKA (Alpha-mannosidase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MWF8_9EUKA)

HSP 1 Score: 157 bits (396), Expect = 9.430e-42
Identity = 69/135 (51.11%), Postives = 94/135 (69.63%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEM 405
            +DS +  +AL AAN+I N  + DDP+T+P  L+  +++ S   +       +SA+GHCHIDTAWLWPY ET RKCARSW +QLR+ E +P+Y+F  SQAQQ DW+K  YPSL+ E+      G F+P+GGTW+EM
Sbjct:  315 KDSLRRAHALTAANNILNVFYYDDPSTWPKCLELSKKFLSVRNSE--DQHRVSAVGHCHIDTAWLWPYAETMRKCARSWANQLRICERFPAYRFVVSQAQQFDWVKEQYPSLYEEIKASVKKGQFLPVGGTWIEM 447          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A1Y1XLF1_9FUNG (Alpha-mannosidase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XLF1_9FUNG)

HSP 1 Score: 154 bits (390), Expect = 6.000e-41
Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEM 405
            ++S Q   AL  AN+I NA   +D  +     +  +E+F S      S   ++A+GHCHIDTAWLWPYDETKRK ARSW +QLRLME YP + F CSQAQQ +WL   YP LF+++ EK+ +G F+PIGGTWVEM
Sbjct:  204 KESNQGAKALYTANEIVNAFRREDVESMKRCREIAKEFFKSRNGT--SQHRITAVGHCHIDTAWLWPYDETKRKVARSWSTQLRLMEKYPEFTFVCSQAQQYEWLAHYYPELFKQVQEKAKSGQFLPIGGTWVEM 336          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: UPI001F0368A4 (alpha-mannosidase 2C1-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0368A4)

HSP 1 Score: 154 bits (389), Expect = 8.200e-41
Identity = 71/138 (51.45%), Postives = 91/138 (65.94%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGME-LSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG 411
            +D+ +A  AL  ANDI N C +    TF L  +  E +F+      G G   + AIGHCHIDTAWLWPY+ETKRKCARSW S +R+ME YP + F CSQAQQ +W+K  YP L+ ++      G+F+P+GGTWVEM G
Sbjct:  210 QDNLRASNALFVANDILNKCDVTKRETFKLCHELAERFFNQKN---GEGQHVIHAIGHCHIDTAWLWPYEETKRKCARSWSSAIRIMEKYPEFVFACSQAQQFEWVKNHYPHLYADIKTFVKQGNFVPVGGTWVEMDG 344          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: UPI00106B89A3 (alpha-mannosidase 2C1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B89A3)

HSP 1 Score: 154 bits (388), Expect = 1.120e-40
Identity = 72/138 (52.17%), Postives = 89/138 (64.49%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGME-LSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG 411
            ED+ +   AL  ANDI N C +  P TF    +  E +        G G   + A+GHCHIDTAWLWPY ET RKC RSW S +RLME YP + FTCSQAQQ +W+K  YP LF ++ + + TGSF+P+GGTWVEM G
Sbjct:  211 EDNLRGSQALYVANDIVNMCDVTKPETFERCHEIAETFLKQKN---GEGQHVIHAMGHCHIDTAWLWPYAETVRKCGRSWSSAVRLMERYPEFTFTCSQAQQFEWVKIHYPHLFEDMKKFAKTGSFLPVGGTWVEMDG 345          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A8C5QTE0_9ANUR (Alpha-mannosidase n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QTE0_9ANUR)

HSP 1 Score: 153 bits (386), Expect = 2.080e-40
Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 1
Query:    1 EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG 411
            ED+ ++  AL  AN + N C ++DP+TF LA++K+   F + +    S   + A+GHCHID+AWLWPY+ET RKCARSW + + LM  YP + FTCSQAQQL+W+KT YP L+  + E +  G FIP+GGTWVEM G
Sbjct:  215 EDNQRSFQALYVANQMVNLCDVNDPSTF-LAVRKLSSAFFNQKNG-DSQHVIHAMGHCHIDSAWLWPYEETIRKCARSWVTVIELMSNYPDFTFTCSQAQQLEWVKTYYPGLYSRIKECAKRGQFIPVGGTWVEMDG 349          
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Match: A0A397UAB1_9GLOM (Alpha-mannosidase n=4 Tax=Gigaspora TaxID=4873 RepID=A0A397UAB1_9GLOM)

HSP 1 Score: 152 bits (383), Expect = 5.270e-40
Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 1
Query:    4 DSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGMELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQQLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEM 405
            D+ ++  AL AAN I N     D  +   ALK   E+      +  +   L+A+GHCHIDTAWLWPYDETKRK ARSW +Q+ LM+ YP YKF CSQAQQ +WLK  YP LF+++ +KS+   F+PIGGTWVEM
Sbjct:  211 DTMRSAQALNAANKIVNTFQPSDNNSIQEALKISNEFLKHKNGS--TQYTLTAVGHCHIDTAWLWPYDETKRKVARSWSTQVGLMDLYPEYKFVCSQAQQFEWLKEYYPKLFKKVQDKSANDQFLPIGGTWVEM 342          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116533.3435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I6J3_9EUKA5.670e-4958.52Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A433PY37_9FUNG3.480e-4356.30Glycosyl hydrolases family 38 N-terminal domain-co... [more]
A0A8J6KD31_ELECQ3.670e-4254.01Alpha-mannosidase n=3 Tax=Eleutherodactylus coqui ... [more]
A0A822EI21_9NEOB7.850e-4251.82(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A2P6MWF8_9EUKA9.430e-4251.11Alpha-mannosidase n=1 Tax=Planoprotostelium fungiv... [more]
A0A1Y1XLF1_9FUNG6.000e-4153.33Alpha-mannosidase n=1 Tax=Basidiobolus meristospor... [more]
UPI001F0368A48.200e-4151.45alpha-mannosidase 2C1-like isoform X1 n=2 Tax=Xeni... [more]
UPI00106B89A31.120e-4052.17alpha-mannosidase 2C1-like n=1 Tax=Dendronephthya ... [more]
A0A8C5QTE0_9ANUR2.080e-4051.82Alpha-mannosidase n=2 Tax=Leptobrachium leishanens... [more]
A0A397UAB1_9GLOM5.270e-4052.99Alpha-mannosidase n=4 Tax=Gigaspora TaxID=4873 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116533contigM-pyrifera_M_contig116533:50..460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score150.6
Seed ortholog evalue5.3e-34
Seed eggNOG ortholog8364.ENSXETP00000051490
Preferred nameMAN2C1
KEGG koko:K01191
KEGG Pathwayko00511,map00511
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005783,GO:0005829,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009100,GO:0009311,GO:0009313,GO:0009987,GO:0012505,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0031974,GO:0031981,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:1901135,GO:1901564,GO:1901575
EggNOG free text desc.Mannosidase alpha class 2C member 1
EggNOG OGs38EQ8@33154,3BDUC@33208,3CZPD@33213,48A3W@7711,48WH1@7742,COG0383@1,KOG4342@2759
EC3.2.1.24
COG Functional cat.G
CAZyGH38
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons1
Model size411
Cds size411
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815682.7086802-CDS-M-pyrifera_M_contig116533:49..4601622815682.7086802-CDS-M-pyrifera_M_contig116533:49..460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116533 50..460 -
1692277519.800209-CDS-M-pyrifera_M_contig116533:49..4601692277519.800209-CDS-M-pyrifera_M_contig116533:49..460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116533 50..460 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116533.3435.1prot_M-pyrifera_M_contig116533.3435.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116533 50..460 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116533.3435.1

>prot_M-pyrifera_M_contig116533.3435.1 ID=prot_M-pyrifera_M_contig116533.3435.1|Name=mRNA_M-pyrifera_M_contig116533.3435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
EDSYQARYALAAANDICNACHLDDPTTFPLALKKMEEYFSSSEAALGSGM
ELSAIGHCHIDTAWLWPYDETKRKCARSWGSQLRLMETYPSYKFTCSQAQ
QLDWLKTGYPSLFRELVEKSSTGSFIPIGGTWVEMVG
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mRNA from alignment at M-pyrifera_M_contig116533:50..460-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116533.3435.1 ID=mRNA_M-pyrifera_M_contig116533.3435.1|Name=mRNA_M-pyrifera_M_contig116533.3435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig116533:50..460- (Macrocystis pyrifera P11B4 male)
GAAGACAGCTACCAAGCCCGATACGCCTTGGCAGCCGCGAACGATATTTG CAACGCATGCCACCTTGATGATCCCACAACGTTCCCTCTTGCCCTCAAGA AGATGGAGGAGTACTTCTCGTCTTCAGAAGCTGCATTGGGCTCTGGCATG GAGCTCAGTGCCATTGGGCATTGCCACATCGACACTGCCTGGCTCTGGCC CTACGACGAAACAAAGCGGAAGTGTGCACGCAGCTGGGGCAGCCAGCTGA GACTCATGGAGACCTACCCGAGCTACAAGTTCACATGCTCTCAGGCCCAG CAGCTTGACTGGCTCAAGACAGGATATCCTTCTCTCTTCCGTGAGCTGGT CGAGAAGAGTTCCACGGGAAGCTTCATTCCCATTGGTGGTACCTGGGTGG AAATGGTAGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116533:50..460-

>mRNA_M-pyrifera_M_contig116533.3435.1 ID=mRNA_M-pyrifera_M_contig116533.3435.1|Name=mRNA_M-pyrifera_M_contig116533.3435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig116533:50..460- (Macrocystis pyrifera P11B4 male)
GAAGACAGCTACCAAGCCCGATACGCCTTGGCAGCCGCGAACGATATTTG
CAACGCATGCCACCTTGATGATCCCACAACGTTCCCTCTTGCCCTCAAGA
AGATGGAGGAGTACTTCTCGTCTTCAGAAGCTGCATTGGGCTCTGGCATG
GAGCTCAGTGCCATTGGGCATTGCCACATCGACACTGCCTGGCTCTGGCC
CTACGACGAAACAAAGCGGAAGTGTGCACGCAGCTGGGGCAGCCAGCTGA
GACTCATGGAGACCTACCCGAGCTACAAGTTCACATGCTCTCAGGCCCAG
CAGCTTGACTGGCTCAAGACAGGATATCCTTCTCTCTTCCGTGAGCTGGT
CGAGAAGAGTTCCACGGGAAGCTTCATTCCCATTGGTGGTACCTGGGTGG
AAATGGTAGGCGAAGACAGCTACCAAGCCCGATACGCCTTGGCAGCCGCG
AACGATATTTGCAACGCATGCCACCTTGATGATCCCACAACGTTCCCTCT
TGCCCTCAAGAAGATGGAGGAGTACTTCTCGTCTTCAGAAGCTGCATTGG
GCTCTGGCATGGAGCTCAGTGCCATTGGGCATTGCCACATCGACACTGCC
TGGCTCTGGCCCTACGACGAAACAAAGCGGAAGTGTGCACGCAGCTGGGG
CAGCCAGCTGAGACTCATGGAGACCTACCCGAGCTACAAGTTCACATGCT
CTCAGGCCCAGCAGCTTGACTGGCTCAAGACAGGATATCCTTCTCTCTTC
CGTGAGCTGGTCGAGAAGAGTTCCACGGGAAGCTTCATTCCCATTGGTGG
TACCTGGGTGGAAATGGTAGGC
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