mRNA_M-pyrifera_M_contig116451.3425.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7J6Q8B4_PEROL (Transducin (Beta)-like 3 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6Q8B4_PEROL) HSP 1 Score: 73.9 bits (180), Expect = 2.450e-13 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 37 TLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFL 207
T GHRRGVW V FSPVDK+LAS++GD +++W + D CIRT QGH ++ L V+F+
Sbjct: 20 TCTGHRRGVWGVDFSPVDKVLASASGDSLLKLWNLVDYTCIRTFQGHEHAVLNVSFI 76
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A316UKA1_9BASI (WD40 repeat-like protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UKA1_9BASI) HSP 1 Score: 74.3 bits (181), Expect = 3.350e-13 Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 22 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFLPGASSNAL 231
L+P+ TL GH+RGVW VAFSPVD + +++GD ++W + D AC++T +GH +S L FL G+ +
Sbjct: 559 LSPLATLKGHKRGVWSVAFSPVDPAILTTSGDRTAKLWSLRDFACVKTFEGHSHSVLKGRFLQGSKGTQI 628
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S0UMX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UMX7_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.060e-13 Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 40 LLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCV 198
L GHRRGVWD FSP+DK+LA+S+GD +++W + D +C+RT QGH +S L V
Sbjct: 1 LKGHRRGVWDCQFSPIDKVLATSSGDKTIKLWSLSDYSCVRTFQGHLSSVLRV 53
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S1NX73_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1NX73_9ALVE) HSP 1 Score: 72.4 bits (176), Expect = 7.080e-13 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 46 GHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGH--PNSALCVTFLPG 213
GHR+ VW++ FSPVD++LAS++GDG R+W + D C++T QGH P+ L V+FL G
Sbjct: 60 GHRKTVWNICFSPVDRVLASASGDGTARIWNLKDYTCVKTFQGHESPHGVLRVSFLSG 117
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A0G4GY15_VITBC (Utp13 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GY15_VITBC) HSP 1 Score: 72.4 bits (176), Expect = 1.590e-12 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 46 GHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGH--PNSALCVTFLPG 213
GHR+ VW++ FSPVD++LAS++GDG R+W + D C++T QGH P+ L V+FL G
Sbjct: 591 GHRKTVWNICFSPVDRVLASASGDGTARIWNLKDYTCVKTFQGHESPHGVLRVSFLSG 648
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S0C1P0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1P0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.770e-12 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 1 KLWDAHTLAP------------IRTLL-GHRRGVWDVAFSPVDKLLASSAGDGHVRVW---RIDDGA------CIRTLQGHPNSALCVTFLPG 213
KLW+ TL+ +R +L GH+RGVWDVAFSP D++LAS +GDG V++W R +D + C+RT QGH +S L V FL G
Sbjct: 121 KLWNNPTLSKSNNNTTSNSSLTLRAILKGHKRGVWDVAFSPHDRVLASGSGDGTVKLWSLGRNNDTSPAGGCRCVRTFQGHSSSVLRVRFLSG 213
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: W4KLH4_HETIT (Utp13 domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KLH4_HETIT) HSP 1 Score: 70.1 bits (170), Expect = 1.030e-11 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 22 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFLPGASS 222
+A + T GH+RGVW V F+ +++LAS GD VR+W ++D AC++ L+GH NS L V +L GA +
Sbjct: 602 IALLGTCRGHKRGVWSVRFARHERVLASGGGDRTVRLWSLEDFACLKVLEGHANSVLRVEWLSGADA 668
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A4S4LPK6_9AGAM (Utp13 domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPK6_9AGAM) HSP 1 Score: 67.0 bits (162), Expect = 1.240e-10 Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 31 IRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQGHPNSALCVTFL 207
+ T GH+RGVW V F+ +++LAS GD VR+W +DD AC++ L+GH NS L V +L
Sbjct: 614 VGTCRGHKRGVWSVRFAKHERVLASGGGDRTVRIWGLDDFACMKVLEGHVNSVLRVEWL 672
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: UPI00140396EC (transducin beta-like protein 3 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140396EC) HSP 1 Score: 65.9 bits (159), Expect = 3.150e-10 Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 22 LAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTLQ 171
+ P+ L GHRRGVW VAFSP+D+++AS++ DG VR+W + D AC++T +
Sbjct: 538 VGPVAVLRGHRRGVWAVAFSPMDQVVASASADGSVRLWGLHDFACLKTFE 587
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Match: A0A7S3BFW1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BFW1_9VIRI) HSP 1 Score: 65.1 bits (157), Expect = 4.850e-10 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 19 TLAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGACIRTL 168
+L P L GHRRGVW VAFSP D+++A+++GD VR+W + D C+RTL
Sbjct: 2 SLVPAGVLRGHRRGVWSVAFSPTDRVVATASGDRTVRLWTVADCVCVRTL 51 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116451.3425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116451.3425.1 >prot_M-pyrifera_M_contig116451.3425.1 ID=prot_M-pyrifera_M_contig116451.3425.1|Name=mRNA_M-pyrifera_M_contig116451.3425.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp KLWDAHTLAPIRTLLGHRRGVWDVAFSPVDKLLASSAGDGHVRVWRIDDGback to top mRNA from alignment at M-pyrifera_M_contig116451:224..556- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116451.3425.1 ID=mRNA_M-pyrifera_M_contig116451.3425.1|Name=mRNA_M-pyrifera_M_contig116451.3425.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig116451:224..556- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116451:224..556- >mRNA_M-pyrifera_M_contig116451.3425.1 ID=mRNA_M-pyrifera_M_contig116451.3425.1|Name=mRNA_M-pyrifera_M_contig116451.3425.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig116451:224..556- (Macrocystis pyrifera P11B4 male)back to top |