mRNA_M-pyrifera_M_contig116434.3419.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A6P4YWM9_BRABE (uncharacterized protein LOC109473319 n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YWM9_BRABE) HSP 1 Score: 72.8 bits (177), Expect = 1.370e-13 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEELLSSLGLEDRMEELMTSPK 219
LAV +LFDR PG+IGSGVI + FKEIR +K V+L +FF E+LE++ R E L++ +E +++ L+ S +
Sbjct: 71 LAVKMLFDRIPGLIGSGVITSQFKEIRQTVKNVVLETFFETEYLENYMHRKSGEFLAAFQIESKLQRLLQSER 143
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: C3XUA3_BRAFL (Uncharacterized protein n=5 Tax=Branchiostoma TaxID=7737 RepID=C3XUA3_BRAFL) HSP 1 Score: 72.8 bits (177), Expect = 2.450e-13 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEELLSSLGLEDRMEELMTSPK 219
LAV +LFDR PG+IGSGVI + FKEIR +K V+L +FF E+LE++ R E L++ +E +++ L+ S +
Sbjct: 159 LAVKMLFDRIPGLIGSGVITSQFKEIRQTVKNVVLETFFETEYLENYMHRKSGEFLAAFQIESKLQRLLQSER 231
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A6T6YHL9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A6T6YHL9_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.230e-12 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEELLSSLGLEDRMEELMTSPK 219
LAV +LFDR PG++GSGVI FKEIR +K ++ +FF+ E+L+ + + H +++SL LE RM + P+
Sbjct: 99 LAVKMLFDRIPGIVGSGVIPMRFKEIRETVKDTIMLTFFDREYLQGYIAAHAPRMIASLNLEQRMAAELAKPE 171
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A2E9MI99_9BACT (Uncharacterized protein n=4 Tax=FCB group TaxID=1783270 RepID=A0A2E9MI99_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 3.350e-10 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEELLS-SLGLEDRMEELMTSPKGRKAL 234
LAV +LFDR PG+ GSGV+ F+EIRV +K +++ FF+ +L+ FF H + S GL ++ EL+ S + +A+
Sbjct: 65 LAVKMLFDRVPGLYGSGVVSARFREIRVTVKDLIMTHFFDEAYLKRFFDEHGSSMTGGSGGLTRKLRELLESEEAGRAI 143
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A2E4LP66_9DELT (DUF445 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E4LP66_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 4.530e-9 Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEELL 168
LA+ +LF+R PG+ GSGVI HF++ +V IK +++H FFN +++E FF + +L
Sbjct: 32 LAIYMLFERVPGLYGSGVILLHFEDFKVGIKELIMHQFFNRKNVEQFFDNSEGSML 87
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A166X5Z3_9GAMM (Uncharacterized protein n=7 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A166X5Z3_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 6.700e-9 Identity = 28/55 (50.91%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEEL 165
LAV++LF++ PG+ GSGVI FKE +VAIK ++L FFN + L+SF S+++ +L
Sbjct: 42 LAVHMLFEKVPGLYGSGVITIKFKEFKVAIKELILDEFFNQDKLQSFASKNQIDL 96
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A432GNS5_9DELT (DUF445 domain-containing protein (Fragment) n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A432GNS5_9DELT) HSP 1 Score: 57.4 bits (137), Expect = 2.060e-8 Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFS 147
LA+ +LF+R PG+ GSGVI HF++ + I +++H FFN E++E FF+
Sbjct: 61 LAIYMLFERVPGLYGSGVIPLHFEDFKTGINELIMHQFFNRENVEKFFA 109
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A2D8MW56_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D8MW56_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 4.640e-8 Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESF 141
LAV +LFDR PG+ GSGVIQ F EIR IKR++L FF E+LE F
Sbjct: 51 LAVKMLFDRIPGLAGSGVIQHRFTEIREEIKRLILDEFFTEENLERF 97
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A354Q632_9DELT (DUF445 domain-containing protein n=9 Tax=root TaxID=1 RepID=A0A354Q632_9DELT) HSP 1 Score: 57.4 bits (137), Expect = 5.790e-8 Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFS 147
LA+ +LF+R PG+ GSGVI HF++ + I +++H FFN E++E FF+
Sbjct: 61 LAIYMLFERVPGLYGSGVIPLHFEDFKTGINELIMHQFFNRENVEKFFA 109
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Match: A0A7Z9FLQ7_9PROT (DUF445 domain-containing protein n=3 Tax=Candidatus Lambdaproteobacteria bacterium TaxID=2035771 RepID=A0A7Z9FLQ7_9PROT) HSP 1 Score: 57.4 bits (137), Expect = 5.790e-8 Identity = 23/55 (41.82%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 1 LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRHKEEL 165
LA+++LF+R PG+ GSGVI HF+ + +I +++H FF+ E++E FF+ K +
Sbjct: 61 LAIHMLFERVPGLYGSGVIPLHFESFKTSIHELIMHQFFSRENVEKFFADSKNSM 115 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116434.3419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116434.3419.1 >prot_M-pyrifera_M_contig116434.3419.1 ID=prot_M-pyrifera_M_contig116434.3419.1|Name=mRNA_M-pyrifera_M_contig116434.3419.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp LAVNLLFDRYPGVIGSGVIQTHFKEIRVAIKRVLLHSFFNIEHLESFFSRback to top mRNA from alignment at M-pyrifera_M_contig116434:327..560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116434.3419.1 ID=mRNA_M-pyrifera_M_contig116434.3419.1|Name=mRNA_M-pyrifera_M_contig116434.3419.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig116434:327..560- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116434:327..560- >mRNA_M-pyrifera_M_contig116434.3419.1 ID=mRNA_M-pyrifera_M_contig116434.3419.1|Name=mRNA_M-pyrifera_M_contig116434.3419.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig116434:327..560- (Macrocystis pyrifera P11B4 male)back to top |