prot_M-pyrifera_M_contig116433.3418.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116433.3418.1
Unique Nameprot_M-pyrifera_M_contig116433.3418.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
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BLAST of mRNA_M-pyrifera_M_contig116433.3418.1 vs. uniprot
Match: A0A5A8D8N9_CAFRO (MFS domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8N9_CAFRO)

HSP 1 Score: 79.0 bits (193), Expect = 4.690e-15
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:    1 SAACYALYGAAQSAWWVYAAQVCTVMQHGMMAARTYISRTSESDHSLDALLGNTVVAYQVATVLGPALGGLTAELYP-RAPA 81
            SA CY +Y  A  AWW+YAAQV T++QHGM+A+RTY+S  + SD   + LLG T  AY    ++GPALGG  A+    RAPA
Sbjct:   79 SAVCYGMYYVAPDAWWLYAAQVPTLLQHGMLASRTYLSVHANSDQQRETLLGMTRFAYGAGMMVGPALGGWLADSVDLRAPA 160
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116433.3418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5A8D8N9_CAFRO4.690e-1552.44MFS domain-containing protein n=4 Tax=Cafeteria ro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..101
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..101
e-value: 2.6E-9
score: 38.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..101
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 81..99
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 2..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116433contigM-pyrifera_M_contig116433:2..304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116433.3418.1mRNA_M-pyrifera_M_contig116433.3418.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116433 2..304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116433.3418.1 ID=prot_M-pyrifera_M_contig116433.3418.1|Name=mRNA_M-pyrifera_M_contig116433.3418.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
SAACYALYGAAQSAWWVYAAQVCTVMQHGMMAARTYISRTSESDHSLDAL
LGNTVVAYQVATVLGPALGGLTAELYPRAPAVAALLLSLLALLITITLLK
D
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf