mRNA_M-pyrifera_M_contig116426.3417.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116426.3417.1
Unique NamemRNA_M-pyrifera_M_contig116426.3417.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A812J591_9DINO (SPAG6 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812J591_9DINO)

HSP 1 Score: 122 bits (305), Expect = 5.050e-29
Identity = 75/99 (75.76%), Postives = 81/99 (81.82%), Query Frame = 1 
Query:    1 LLSSLLLQ-VPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGALEALVACLEEFDPSVK 294
            LL  LLL  V SIQQ+AALALGRLANYSD+LAE+VV HEILPQLVYSL +Q NRFYKKAAA+VLRA      XXX   VD+GALEALV CLEEFDPSVK
Sbjct:   50 LLRPLLLDNVASIQQSAALALGRLANYSDELAESVVTHEILPQLVYSLAQQ-NRFYKKAAAFVLRAVSKHSPXXXQAVVDSGALEALVNCLEEFDPSVK 147
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A3R6WK16_9STRA (Uncharacterized protein (Fragment) n=15 Tax=Oomycota TaxID=4762 RepID=A0A3R6WK16_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.210e-24
Identity = 65/106 (61.32%), Postives = 71/106 (66.98%), Query Frame = 1 
Query:   34 IQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGA-------------------LEALVACLEEFDPSVK 294
            IQQ+AALALGRLANYSDDLAEA+V +EILPQLVYSL EQ NRFYKKAAA+VLRA            VD+GA                   LEALV CLEEFDP+VK
Sbjct:    1 IQQSAALALGRLANYSDDLAEAIVGNEILPQLVYSLSEQ-NRFYKKAAAFVLRAVAKHSPELAQAVVDSGANESPMDQPSGTHNYSKPGALEALVPCLEEFDPTVK 105
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A3L6VK01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VK01_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.520e-22
Identity = 58/83 (69.88%), Postives = 64/83 (77.11%), Query Frame = 1 
Query:    1 LLSSLLLQ-VPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGA 246
            LL  LLL  VPSIQQ+AALALGRLANYSDDLAEA+V +EILPQLVYSL EQ NRFYKKAAA+VLRA            VD+G+
Sbjct:   45 LLRPLLLDNVPSIQQSAALALGRLANYSDDLAEAIVGNEILPQLVYSLSEQ-NRFYKKAAAFVLRAVAKHSPELAQAVVDSGS 126
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A7S3H3D1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3D1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.800e-21
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1 
Query:    1 LLSSLLLQ-VPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRA 195
            LL  LLL  VPSIQQTAALALGRLANYS+DLAEAVV +EILPQLVYSL +Q NRFYKKAAA+VLRA
Sbjct:   42 LLRPLLLDNVPSIQQTAALALGRLANYSEDLAEAVVGNEILPQLVYSLSDQ-NRFYKKAAAFVLRA 106
[Close]
BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A8B7T6I9_HIPAR (LOW QUALITY PROTEIN: sperm-associated antigen 6-like n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7T6I9_HIPAR)

HSP 1 Score: 97.8 bits (242), Expect = 5.300e-21
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:    1 LLSSLLLQV-PSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGALEALVACLEEFDPSVK 294
            LL  LLL V P+IQQTAALALGRLANY+DDL EAVV  +I PQLVYSL  ++N FYKKAAA+VL+A          X V+  AL+ LV CLE FD  VK
Sbjct:   23 LLRPLLLDVVPTIQQTAALALGRLANYNDDLVEAVVKDDIPPQLVYSL--EQNHFYKKAAAFVLQAVAKHSPQIAQXIVEYRALDRLVICLENFDSGVK 119
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: UPI0009E58A48 (sperm-associated antigen 6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E58A48)

HSP 1 Score: 90.5 bits (223), Expect = 2.200e-20
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    1 LLSSLLLQV-PSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRA 195
            LL  LLL V PSIQQTAALALGRLANY++DLAEAVV  +ILPQLVYSL EQ NRFYKKAAA+VLRA
Sbjct:   45 LLRPLLLDVVPSIQQTAALALGRLANYNEDLAEAVVKGDILPQLVYSLAEQ-NRFYKKAAAFVLRA 109
[Close]
BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: UPI000942DBFE (LOW QUALITY PROTEIN: sperm-associated antigen 6-like n=1 Tax=Rhinolophus sinicus TaxID=89399 RepID=UPI000942DBFE)

HSP 1 Score: 96.7 bits (239), Expect = 2.470e-20
Identity = 71/98 (72.45%), Postives = 76/98 (77.55%), Query Frame = 1 
Query:    1 LLSSLLLQV-PSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGALEALVACLEEFDPSV 291
            LL  LLL V P+IQQTAALALGRLANY+DDLAEAVV  +ILPQLVY L EQ N FYKK A  VLR  XXXXXXXXXXX   GAL+ LV CL +FDP V
Sbjct:   45 LLRPLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKGDILPQLVYLLAEQ-NCFYKKIATIVLRTVXXXXXXXXXXXXXCGALDTLVICLADFDPEV 141
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BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A2P8Z6G9_BLAGE (Sperm-associated antigen 6 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Z6G9_BLAGE)

HSP 1 Score: 95.9 bits (237), Expect = 3.530e-20
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 1 
Query:   25 VPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGALEALVACLEEFDPSVK 294
            VP IQQTAA+ALGR+ANY   +A+A+V  +ILPQL+ S+ +Q N+FYKKAA +VLRA            V +G LEA+V CLE+FDP VK
Sbjct:   95 VPPIQQTAAVALGRMANYDGKIAQAIVRKDILPQLLQSINKQ-NKFYKKAALFVLRAISKHSPEMAQVTVQSGGLEAMVVCLEDFDPGVK 183
[Close]
BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A671EJ60_RHIFE (Uncharacterized protein n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A671EJ60_RHIFE)

HSP 1 Score: 95.1 bits (235), Expect = 4.090e-20
Identity = 71/98 (72.45%), Postives = 76/98 (77.55%), Query Frame = 1 
Query:    1 LLSSLLLQV-PSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAGALEALVACLEEFDPSV 291
            LL  LLL V P+IQQTAALALGRLANY+DDLAEAVV  +ILPQLVYSL EQ NRFYKK A      XXXXXXXXXXXX    AL+ LV CLE+FDP V
Sbjct:   14 LLRPLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKGDILPQLVYSLAEQ-NRFYKKTATXXXXXXXXXXXXXXXXXXXXXALDTLVICLEDFDPGV 110
[Close]
BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Match: A0A6A7GDC5_9CRUS (Sperm-associated antigen 6 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GDC5_9CRUS)

HSP 1 Score: 89.7 bits (221), Expect = 4.750e-20
Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = 1 
Query:    1 LLSSLLLQ-VPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQENRFYKKAAAYVLRAXXXXXXXXXXXXVDAG 243
            LL  LLL  VPSIQQ+AALALGRLANYS+ LAE+VV +E+LPQLVYSL EQ NR+YKKAAA+VLRA            VDAG
Sbjct:   44 LLRPLLLDTVPSIQQSAALALGRLANYSEALAESVVMNEVLPQLVYSLSEQ-NRYYKKAAAFVLRAVAKHSPELAQSVVDAG 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116426.3417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812J591_9DINO5.050e-2975.76SPAG6 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A3R6WK16_9STRA3.210e-2461.32Uncharacterized protein (Fragment) n=15 Tax=Oomyco... [more]
A0A3L6VK01_9STRA1.520e-2269.88Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S3H3D1_9STRA1.800e-2183.33Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8B7T6I9_HIPAR5.300e-2161.62LOW QUALITY PROTEIN: sperm-associated antigen 6-li... [more]
UPI0009E58A482.200e-2081.82sperm-associated antigen 6-like n=1 Tax=Orbicella ... [more]
UPI000942DBFE2.470e-2072.45LOW QUALITY PROTEIN: sperm-associated antigen 6-li... [more]
A0A2P8Z6G9_BLAGE3.530e-2055.56Sperm-associated antigen 6 n=1 Tax=Blattella germa... [more]
A0A671EJ60_RHIFE4.090e-2072.45Uncharacterized protein n=1 Tax=Rhinolophus ferrum... [more]
A0A6A7GDC5_9CRUS4.750e-2067.07Sperm-associated antigen 6 (Fragment) n=1 Tax=Hiro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116426contigM-pyrifera_M_contig116426:60..560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score105.5
Seed ortholog evalue2.4e-20
Seed eggNOG ortholog8932.XP_005500860.1
Preferred nameSPAG6
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000226,GO:0001578,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0019953,GO:0021591,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0035082,GO:0036126,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060322,GO:0070925,GO:0071840,GO:0097014,GO:0097223,GO:0097228,GO:0097722,GO:0097729,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1990716
EggNOG free text desc.antigen 6
EggNOG OGs38BV1@33154,3BC5X@33208,3CT8V@33213,48B7W@7711,4947E@7742,4GKQY@8782,COG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelAves
Best eggNOG OGNA|NA|NA
Exons1
Model size501
Cds size501
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815681.8928537-CDS-M-pyrifera_M_contig116426:59..5601622815681.8928537-CDS-M-pyrifera_M_contig116426:59..560Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116426 60..560 +
1692277519.4427712-CDS-M-pyrifera_M_contig116426:59..5601692277519.4427712-CDS-M-pyrifera_M_contig116426:59..560Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116426 60..560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116426.3417.1prot_M-pyrifera_M_contig116426.3417.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116426 60..560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116426.3417.1

>prot_M-pyrifera_M_contig116426.3417.1 ID=prot_M-pyrifera_M_contig116426.3417.1|Name=mRNA_M-pyrifera_M_contig116426.3417.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
LLSSLLLQVPSIQQTAALALGRLANYSDDLAEAVVAHEILPQLVYSLGEQ
ENRFYKKAAAYVLRAVAKHSPELAQAVVDAGALEALVACLEEFDPSVKEA
AAWALGYIASHTAELAQAVVDAGAVPLLVLCVQEPEISLKRITASALHDV
AKHSPELAQAVVDAGAV
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mRNA from alignment at M-pyrifera_M_contig116426:60..560+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116426.3417.1 ID=mRNA_M-pyrifera_M_contig116426.3417.1|Name=mRNA_M-pyrifera_M_contig116426.3417.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig116426:60..560+ (Macrocystis pyrifera P11B4 male)
CTCCTCTCCTCTCTTCTTTTACAGGTTCCTTCGATCCAGCAGACGGCTGC
CTTGGCGCTGGGTCGTTTGGCGAACTACAGCGACGACCTGGCGGAGGCGG
TGGTGGCGCACGAGATTCTGCCGCAGCTGGTGTACTCTCTGGGGGAGCAG
GAGAACCGGTTCTACAAGAAGGCTGCGGCGTATGTGTTGCGTGCGGTGGC
CAAGCATTCTCCCGAATTGGCGCAGGCGGTGGTGGATGCGGGGGCGCTGG
AGGCTCTGGTGGCGTGTCTGGAAGAATTCGACCCTTCTGTGAAGGAAGCG
GCGGCATGGGCTCTGGGCTACATTGCCTCCCACACTGCCGAACTTGCACA
AGCTGTGGTGGATGCTGGCGCTGTGCCACTGCTGGTGCTGTGTGTGCAAG
AGCCGGAAATTTCGCTGAAGCGCATCACTGCCAGTGCACTCCATGACGTG
GCCAAGCATTCTCCCGAACTTGCACAGGCCGTGGTGGACGCGGGGGCTGT
G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116426:60..560+

>mRNA_M-pyrifera_M_contig116426.3417.1 ID=mRNA_M-pyrifera_M_contig116426.3417.1|Name=mRNA_M-pyrifera_M_contig116426.3417.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig116426:60..560+ (Macrocystis pyrifera P11B4 male)
CTCCTCTCCTCTCTTCTTTTACAGGTTCCTTCGATCCAGCAGACGGCTGC
CTTGGCGCTGGGTCGTTTGGCGAACTACAGCGACGACCTGGCGGAGGCGG
TGGTGGCGCACGAGATTCTGCCGCAGCTGGTGTACTCTCTGGGGGAGCAG
GAGAACCGGTTCTACAAGAAGGCTGCGGCGTATGTGTTGCGTGCGGTGGC
CAAGCATTCTCCCGAATTGGCGCAGGCGGTGGTGGATGCGGGGGCGCTGG
AGGCTCTGGTGGCGTGTCTGGAAGAATTCGACCCTTCTGTGAAGGAAGCG
GCGGCATGGGCTCTGGGCTACATTGCCTCCCACACTGCCGAACTTGCACA
AGCTGTGGTGGATGCTGGCGCTGTGCCACTGCTGGTGCTGTGTGTGCAAG
AGCCGGAAATTTCGCTGAAGCGCATCACTGCCAGTGCACTCCATGACGTG
GCCAAGCATTCTCCCGAACTTGCACAGGCCGTGGTGGACGCGGGGGCTGT
GCTCCTCTCCTCTCTTCTTTTACAGGTTCCTTCGATCCAGCAGACGGCTG
CCTTGGCGCTGGGTCGTTTGGCGAACTACAGCGACGACCTGGCGGAGGCG
GTGGTGGCGCACGAGATTCTGCCGCAGCTGGTGTACTCTCTGGGGGAGCA
GGAGAACCGGTTCTACAAGAAGGCTGCGGCGTATGTGTTGCGTGCGGTGG
CCAAGCATTCTCCCGAATTGGCGCAGGCGGTGGTGGATGCGGGGGCGCTG
GAGGCTCTGGTGGCGTGTCTGGAAGAATTCGACCCTTCTGTGAAGGAAGC
GGCGGCATGGGCTCTGGGCTACATTGCCTCCCACACTGCCGAACTTGCAC
AAGCTGTGGTGGATGCTGGCGCTGTGCCACTGCTGGTGCTGTGTGTGCAA
GAGCCGGAAATTTCGCTGAAGCGCATCACTGCCAGTGCACTCCATGACGT
GGCCAAGCATTCTCCCGAACTTGCACAGGCCGTGGTGGACGCGGGGGCTG
TG
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