prot_M-pyrifera_M_contig116407.3409.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116407.3409.1
Unique Nameprot_M-pyrifera_M_contig116407.3409.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: B8C8T8_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8T8_THAPS)

HSP 1 Score: 94.7 bits (234), Expect = 6.510e-22
Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 0 
Query:    1 IRGLGGLRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 142
            I GLG L  LR+LD+QSNRLT +E L       EELYL HN I+    +   G+    T L+T+DLS NRL+   P AH                I +F++V P    A  EL  +YLE+NP+A  F+YR +LA  IP+LTQIDA  +
Sbjct:   15 IEGLGKLTKLRRLDVQSNRLTKIENLTSQVDTLEELYLAHNGIDVEGASCETGLALPFTQLNTIDLSRNRLTNSTPFAHLKSLTDLWISGNE---IKTFEEVEPLT--ALTELDGVYLEYNPVASEFEYRKKLAEMIPSLTQIDANMI 157
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S4WB46_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WB46_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.530e-17
Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 0 
Query:    4 LGGLRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPE---LQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 139
            L  L  LR+LD+QSNRLT +E L       EELYL +N I     T   G+    + L+TLDLS NRL+   P                  I +FDDV P     + +   L+ +YLE+NP+++ FDYR R+A  +P+L QIDA
Sbjct:   33 LSQLTKLRRLDVQSNRLTAIENLSSQVDTLEELYLANNGISDEGATCETGLALPFSKLNTLDLSKNRLTTTTP--FVHIHSLEELWLSSNDIKTFDDVEPIAILGSRDGACLEGIYLEYNPVSKEFDYRKRIAAMLPSLNQIDA 174
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S0GI44_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GI44_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.600e-16
Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 0 
Query:    7 LRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIETLHPGVFA----------SLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 142
            L  L++LD+QSNRLT +  L       EELYL  N I     G+FA          S ++L+TLDLS N+L+     H                IA+F+D +  L+  T  L+ +Y+E+NP+A  FDYR  L++ +P LTQIDAT V
Sbjct:   30 LTKLKRLDVQSNRLTSISNLSSQTATLEELYLADNGITD--EGLFADIETKTGLSQSFSTLNTLDLSKNKLATT--KHFSHLTTLEELWLSTNDIANFEDGVHPLESLT-NLEGIYMEYNPIASQFDYRTTLSKVVPNLTQIDATMV 171
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S1VWU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWU0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.170e-16
Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 0 
Query:    1 IRGLGGLRGLRKLDLQSNRLTLVEGLXXXXXX--EELYLGHNAI--ETLHPGVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFD-YRIRLARRIPTLTQIDATAV 142
            I GL  L  LR+LD+QSNRLT +EGL        EELYL HN I  E    G+    T L  +D+S NRL++  P AH                + S DD+  +L   T +L  +YLE+NPL +    YR RL   IP+L+QIDA  +
Sbjct:   18 ISGLESLTKLRRLDVQSNRLTTLEGLTTSQVDTLEELYLSHNGITNEGASIGLSLPFTKLSIIDMSRNRLTSTAPFAHLGASLEDLWVSGNQ--MESIDDLAESLASLT-KLDVIYLEYNPLQKGDPLYRKRLKELIPSLSQIDANMI 162
[Close]
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A812L2D6_9DINO (PPP1R7 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812L2D6_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 5.240e-13
Identity = 59/126 (46.83%), Postives = 73/126 (57.94%), Query Frame = 0 
Query:   16 QSNRLTLVEGLXXXXXXEELYLGHNAIETLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATA 141
            QSNRLT +EGL      EEL+LGHNAIET+          L TLDL+ N++S +    XXXXXXXXXX      +               EL+TLYLEHNP+AR   YR  +A  +P LTQ+DAT+
Sbjct:  347 QSNRLTKIEGLSTLTKLEELFLGHNAIETIE----GLERCLKTLDLTRNQISKIENVAXXXXXXXXXXLEPLKGLG--------------ELRTLYLEHNPVARLSGYRETVASELPQLTQLDATS 454
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: K0T6R4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6R4_THAOC)

HSP 1 Score: 72.8 bits (177), Expect = 3.340e-12
Identity = 47/114 (41.23%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:   33 EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 142
            EELYL HN I     T+  G+    T L+TLDLSSNRL+   P                  I +FDDV          L  +YLEHNP+A  F+YR++L + IP+LTQIDA  +
Sbjct:  287 EELYLAHNGITVEGATVESGLALKFTQLNTLDLSSNRLTDASPLSHLTSLTDLWISSND--IKTFDDV--QXXXXXXXLDGIYLEHNPVASDFEYRMQLTKIIPSLTQIDANMI 396
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S3Q0W2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0W2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.890e-11
Identity = 51/132 (38.64%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:   20 LTLVEGLXXXXXX-EELYLGHNAIE---TLHP-GVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPE---LQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 142
            LT VE L       EELYL HN I+    + P G+    T L TLDLS NRL++  P AH                I+SFD++ P     T +   L  +Y+EHNP+   F+YR +L   IP+L QIDA  +
Sbjct:  246 LTCVENLTSQIDTLEELYLAHNGIDDEGAMDPTGIALDFTQLTTLDLSKNRLTSCRPFAHLKTLNDLWVSSNN---ISSFDELEPLSSLGTRDGACLTEIYMEHNPIYNDFEYRKKLKEMIPSLVQIDANVI 374
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BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A835IFF3_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IFF3_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 1.060e-10
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 0 
Query:    4 LGGLRGLRKLDLQSNRLTLVEGLXXXXXXEELYLGHNAIETLHPGVFASLTSLHTLDLSSNRLSAL-----LPAHXXXXXXXXXXXXXXX--AIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 139
            L GL+ +RK+ LQSNRLT + G       EELY     I  +     ++L +L  LD+SSN+L+A+     L  H                  IAS D +  AL  +  +L T+Y+EHNP A + +Y   L +  P L QID+
Sbjct:  188 LCGLKCIRKISLQSNRLTNMTGFQDCVALEELYXXXXGISKMEG--LSTLVNLRILDISSNKLTAVDDIEKLTRHSYGLLLCRLEDLWMNDNQIASLDGLDLALAGSRDKLTTIYVEHNPCANSPNYTKTLRQFFPNLEQIDS 328
[Close]
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7R9ZPI7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPI7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.590e-10
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 0 
Query:   20 LTLVEGLXXXXXX-EELYLGHNAIET----LHPGVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATP------ELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 142
            LT +E L       EE+YL HN I+        G+     +L  +DLS NRL+   P AH                I +FDDV    Q A+       +L+T+YLE+NP+A+ F+YR +LA  +P+L+QIDAT +
Sbjct:  293 LTKIENLETQLETLEEIYLSHNGIDDEGALQATGLALKFPNLSVVDLSRNRLTTCQPFAHLKSLEELWISGNQ---IKTFDDVEALKQPASGGSSLAVKLETVYLEYNPVAKEFEYRKKLAEWVPSLSQIDATRI 424
[Close]
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S2EF28_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EF28_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.670e-10
Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:   33 EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPE---LQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 139
            EELYL +N I     T   G+    + L+TLDLS NRL+   P                  I +FDDV P     + +   L+ +YLE+NP+++ FDYR R+A  +P+L QIDA
Sbjct:  255 EELYLANNGISDEGATCETGLALPFSKLNTLDLSKNRLTTTTP--FVHIHSLEELWLSSNDIKTFDDVEPIAILGSRDGACLEGIYLEYNPVSKEFDYRKRIAAMLPSLNQIDA 366
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
B8C8T8_THAPS6.510e-2243.24Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4WB46_9STRA4.530e-1739.58Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0GI44_9STRA1.600e-1638.78Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1VWU0_9STRA8.170e-1640.54Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A812L2D6_9DINO5.240e-1346.83PPP1R7 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A... [more]
K0T6R4_THAOC3.340e-1241.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3Q0W2_9STRA3.890e-1138.64Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A835IFF3_9MAGN1.060e-1034.97Uncharacterized protein n=2 Tax=Coptis chinensis T... [more]
A0A7R9ZPI7_9STRA3.590e-1036.30Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2EF28_9STRA8.670e-1037.72Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 10..23
score: 44.74
coord: 53..66
score: 56.2
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 7..28
e-value: 0.21
score: 20.7
coord: 29..47
e-value: 87.0
score: 7.9
coord: 77..98
e-value: 53.0
score: 9.6
coord: 53..74
e-value: 300.0
score: 3.5
NoneNo IPR availablePANTHERPTHR46652:SF4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9coord: 51..142
NoneNo IPR availablePANTHERPTHR46652:SF4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9coord: 1..69
NoneNo IPR availablePANTHERPTHR46652FAMILY NOT NAMEDcoord: 51..142
coord: 1..69
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 4..139
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 53..76
e-value: 2.2
score: 17.3
coord: 29..52
e-value: 6.6E-5
score: 32.3
coord: 7..28
e-value: 76.0
score: 6.1
coord: 77..100
e-value: 31.0
score: 9.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 31..90
e-value: 1.6E-14
score: 53.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 106..127
score: 5.032
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 55..78
score: 6.534
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 31..52
score: 6.395
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 9..30
score: 7.981
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 79..100
score: 6.418
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..145
e-value: 2.8E-32
score: 113.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116407contigM-pyrifera_M_contig116407:123..560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116407.3409.1mRNA_M-pyrifera_M_contig116407.3409.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116407 123..560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116407.3409.1 ID=prot_M-pyrifera_M_contig116407.3409.1|Name=mRNA_M-pyrifera_M_contig116407.3409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
IRGLGGLRGLRKLDLQSNRLTLVEGLEALEALEELYLGHNAIETLHPGVF
ASLTSLHTLDLSSNRLSALLPAHLEGLRALKDLWLSANAIASFDDVIPAL
QEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAVPRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf