mRNA_M-pyrifera_M_contig116407.3409.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: B8C8T8_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8T8_THAPS) HSP 1 Score: 94.7 bits (234), Expect = 6.510e-22 Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 1
Query: 1 IRGLGGLRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 426
I GLG L LR+LD+QSNRLT +E L EELYL HN I+ + G+ T L+T+DLS NRL+ P AH I +F++V P A EL +YLE+NP+A F+YR +LA IP+LTQIDA +
Sbjct: 15 IEGLGKLTKLRRLDVQSNRLTKIENLTSQVDTLEELYLAHNGIDVEGASCETGLALPFTQLNTIDLSRNRLTNSTPFAHLKSLTDLWISGNE---IKTFEEVEPLT--ALTELDGVYLEYNPVASEFEYRKKLAEMIPSLTQIDANMI 157
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S4WB46_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WB46_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.530e-17 Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 1
Query: 10 LGGLRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPE---LQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 417
L L LR+LD+QSNRLT +E L EELYL +N I T G+ + L+TLDLS NRL+ P I +FDDV P + + L+ +YLE+NP+++ FDYR R+A +P+L QIDA
Sbjct: 33 LSQLTKLRRLDVQSNRLTAIENLSSQVDTLEELYLANNGISDEGATCETGLALPFSKLNTLDLSKNRLTTTTP--FVHIHSLEELWLSSNDIKTFDDVEPIAILGSRDGACLEGIYLEYNPVSKEFDYRKRIAAMLPSLNQIDA 174
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S0GI44_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GI44_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.600e-16 Identity = 57/147 (38.78%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 19 LRGLRKLDLQSNRLTLVEGLXXXXXX-EELYLGHNAIETLHPGVFA----------SLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 426
L L++LD+QSNRLT + L EELYL N I G+FA S ++L+TLDLS N+L+ H IA+F+D + L+ T L+ +Y+E+NP+A FDYR L++ +P LTQIDAT V
Sbjct: 30 LTKLKRLDVQSNRLTSISNLSSQTATLEELYLADNGITD--EGLFADIETKTGLSQSFSTLNTLDLSKNKLATT--KHFSHLTTLEELWLSTNDIANFEDGVHPLESLT-NLEGIYMEYNPIASQFDYRTTLSKVVPNLTQIDATMV 171
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S1VWU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWU0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 8.170e-16 Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 1
Query: 1 IRGLGGLRGLRKLDLQSNRLTLVEGLXXXXXX--EELYLGHNAI--ETLHPGVFASLTSLHTLDLSSNRLSALLP-AHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFD-YRIRLARRIPTLTQIDATAV 426
I GL L LR+LD+QSNRLT +EGL EELYL HN I E G+ T L +D+S NRL++ P AH + S DD+ +L T +L +YLE+NPL + YR RL IP+L+QIDA +
Sbjct: 18 ISGLESLTKLRRLDVQSNRLTTLEGLTTSQVDTLEELYLSHNGITNEGASIGLSLPFTKLSIIDMSRNRLTSTAPFAHLGASLEDLWVSGNQ--MESIDDLAESLASLT-KLDVIYLEYNPLQKGDPLYRKRLKELIPSLSQIDANMI 162
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A812L2D6_9DINO (PPP1R7 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812L2D6_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 5.240e-13 Identity = 59/126 (46.83%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 46 QSNRLTLVEGLXXXXXXEELYLGHNAIETLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATA 423
QSNRLT +EGL EEL+LGHNAIET+ L TLDL+ N++S + XXXXXXXXXX + EL+TLYLEHNP+AR YR +A +P LTQ+DAT+
Sbjct: 347 QSNRLTKIEGLSTLTKLEELFLGHNAIETIE----GLERCLKTLDLTRNQISKIENVAXXXXXXXXXXLEPLKGLG--------------ELRTLYLEHNPVARLSGYRETVASELPQLTQLDATS 454
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: K0T6R4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6R4_THAOC) HSP 1 Score: 72.8 bits (177), Expect = 3.340e-12 Identity = 47/114 (41.23%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 97 EELYLGHNAIE----TLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 426
EELYL HN I T+ G+ T L+TLDLSSNRL+ P I +FDDV L +YLEHNP+A F+YR++L + IP+LTQIDA +
Sbjct: 287 EELYLAHNGITVEGATVESGLALKFTQLNTLDLSSNRLTDASPLSHLTSLTDLWISSND--IKTFDDV--QXXXXXXXLDGIYLEHNPVASDFEYRMQLTKIIPSLTQIDANMI 396
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A835IFF3_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IFF3_9MAGN) HSP 1 Score: 68.2 bits (165), Expect = 1.060e-10 Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 1
Query: 10 LGGLRGLRKLDLQSNRLTLVEGLXXXXXXEELYLGHNAIETLHPGVFASLTSLHTLDLSSNRLSAL-----LPAHXXXXXXXXXXXXXXX--AIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 417
L GL+ +RK+ LQSNRLT + G EELY I + ++L +L LD+SSN+L+A+ L H IAS D + AL + +L T+Y+EHNP A + +Y L + P L QID+
Sbjct: 188 LCGLKCIRKISLQSNRLTNMTGFQDCVALEELYXXXXGISKMEG--LSTLVNLRILDISSNKLTAVDDIEKLTRHSYGLLLCRLEDLWMNDNQIASLDGLDLALAGSRDKLTTIYVEHNPCANSPNYTKTLRQFFPNLEQIDS 328
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A7S4AVP6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AVP6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.240e-9 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 97 EELYLGHNAIETLHPGVFASL----------TSLHTLDLSSNRLSALL-----PAHXXXXXXXXXXXXXXXA---IASFDDVIPALQEAT-----PELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAV 426
EELYLGHN ++ SL + L+ LDLS NRL+ P + + I F+ V P L+EA+ P+L+TLYLE+NP+A F+YR +LA +PTL QIDAT +
Sbjct: 305 EELYLGHNGLDNDGISGLISLMGRSDSTLIFSKLNVLDLSRNRLTTAASLVVDPKNDNVFGEWPTLEELWLSGNSIEDFEAVYP-LKEASERNHLPQLETLYLEYNPVASHFEYRKKLAEFVPTLEQIDATKI 436
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A8M8VB25_SESIN (protein phosphatase 1 regulatory subunit pprA n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8VB25_SESIN) HSP 1 Score: 62.8 bits (151), Expect = 1.000e-8 Identity = 48/158 (30.38%), Postives = 68/158 (43.04%), Query Frame = 1
Query: 10 LGGLRGLRKLDLQSNRLTLVEGLXXXXXXE----------------------ELYLGHNAIETLHPGVFASLTSLHTLDLSSNRLSALLPAHXXXXXXXXXXXXXXXAIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDA 417
L GL+ ++KL LQSNRLT + GL ELYL HN IE + ++L +L LD+SSN+L + I S D + A+ + L T+YLE NP A + +Y L + P + QID+
Sbjct: 233 LCGLKCIKKLSLQSNRLTSISGLESCCLISYFSMKXXXXXXXXXXXXXXXXXELYLSHNGIEKMEG--LSTLVNLRVLDVSSNKLKEI--NDIKNLAKLEDLWLNDNQITSLDSIAEAVASSRESLTTIYLERNPCANSPNYISTLRQIFPKIQQIDS 386
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Match: A0A482RXF1_9ARCH (Leucine-rich repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXF1_9ARCH) HSP 1 Score: 56.6 bits (135), Expect = 1.030e-6 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 265 AIASFDDVIPALQEATPELQTLYLEHNPLARAFDYRIRLARRIPTLTQIDATAVPR 432
A++SFD + P + P L LYLEH+P+A+ F+YR++LA+ IP+L Q+DAT V R
Sbjct: 210 ALSSFDALTPFTK--LPRLTCLYLEHSPIAKDFEYRMQLAKMIPSLEQLDATNVHR 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116407.3409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116407.3409.1 >prot_M-pyrifera_M_contig116407.3409.1 ID=prot_M-pyrifera_M_contig116407.3409.1|Name=mRNA_M-pyrifera_M_contig116407.3409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp IRGLGGLRGLRKLDLQSNRLTLVEGLEALEALEELYLGHNAIETLHPGVFback to top mRNA from alignment at M-pyrifera_M_contig116407:123..560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116407.3409.1 ID=mRNA_M-pyrifera_M_contig116407.3409.1|Name=mRNA_M-pyrifera_M_contig116407.3409.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig116407:123..560- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116407:123..560- >mRNA_M-pyrifera_M_contig116407.3409.1 ID=mRNA_M-pyrifera_M_contig116407.3409.1|Name=mRNA_M-pyrifera_M_contig116407.3409.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig116407:123..560- (Macrocystis pyrifera P11B4 male)back to top |