mRNA_M-pyrifera_M_contig116369.3396.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A1J1GFC0_9SPER (Splicing factor 3B subunit (Fragment) n=13 Tax=Keteleeria TaxID=3323 RepID=A0A1J1GFC0_9SPER) HSP 1 Score: 285 bits (730), Expect = 7.040e-96 Identity = 145/175 (82.86%), Postives = 156/175 (89.14%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVNAL RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 27 PYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALSQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 201
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A835Q468_VANPL (TOG domain-containing protein n=5 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q468_VANPL) HSP 1 Score: 286 bits (733), Expect = 5.640e-92 Identity = 146/175 (83.43%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 255 PYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQIRGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 429
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A2K3LVV7_TRIPR (Splicing factor 3B subunit 1-like protein n=2 Tax=rosids TaxID=71275 RepID=A0A2K3LVV7_TRIPR) HSP 1 Score: 284 bits (727), Expect = 8.780e-92 Identity = 144/175 (82.29%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVN+LG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALK+IVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 41 PYRRMVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 215
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A835R3I1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R3I1_VANPL) HSP 1 Score: 283 bits (724), Expect = 1.030e-91 Identity = 144/175 (82.29%), Postives = 155/175 (88.57%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGI YAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SR+A VM C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 255 PYRRMVMETIEKVVANLGASDIDARLEELLIDGIRYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRMAVVMKHCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 429
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: T1MGZ8_TRIUA (TOG domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1MGZ8_TRIUA) HSP 1 Score: 290 bits (743), Expect = 2.130e-91 Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 301 PYRRMVMETIEKVVANLGTSDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 475
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A0D9YM79_9ORYZ (Uncharacterized protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A0D9YM79_9ORYZ) HSP 1 Score: 287 bits (735), Expect = 3.080e-91 Identity = 146/175 (83.43%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 166 PYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 340
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A453NAN5_AEGTS (TOG domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NAN5_AEGTS) HSP 1 Score: 290 bits (743), Expect = 6.700e-91 Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 359 PYRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 533
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A453JIU3_AEGTS (TOG domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JIU3_AEGTS) HSP 1 Score: 290 bits (743), Expect = 6.830e-91 Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+PRLEELLIDGILYAFQEQ +DD VML+GFG VVNALG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 359 PYRRMVMETIEKVVANLGTSDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 533
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A2P5WG13_GOSBA (TOG domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5WG13_GOSBA) HSP 1 Score: 286 bits (733), Expect = 8.500e-91 Identity = 145/175 (82.86%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 1 PYRKMVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
PYR+MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVN+LG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRL PIL NRHEKVQENCI
Sbjct: 129 PYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCI 303
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Match: A0A392P898_9FABA (Splicing factor 3B subunit 1-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P898_9FABA) HSP 1 Score: 273 bits (699), Expect = 1.120e-90 Identity = 140/171 (81.87%), Postives = 152/171 (88.89%), Query Frame = 1
Query: 13 MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGTVVNALGVRVKPYLNQIVSTIKWRLNLKSAKVRQQAADLVSRIAGVMMKCDAEQLMGHLGVVLFEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLPPILNNRHEKVQENCI 525
MVME IE++V++LG SDI+ RLEELLIDGILYAFQEQ +DD VML+GFG VVN+LG RVKPYL QI TIKWRLN KSAKVRQQAADL+SRIA VM +C EQLMGHLGVVL+EYLGEEYPEVLGSILGALK+IVNVIGMTKMTPPIKDLLPRL PIL N HEKVQENCI
Sbjct: 1 MVMETIEKVVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNXHEKVQENCI 171 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116369.3396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116369.3396.1 >prot_M-pyrifera_M_contig116369.3396.1 ID=prot_M-pyrifera_M_contig116369.3396.1|Name=mRNA_M-pyrifera_M_contig116369.3396.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MVMEAIERIVSSLGVSDIEPRLEELLIDGILYAFQEQKTDDTKVMLSGFGback to top mRNA from alignment at M-pyrifera_M_contig116369:2..526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116369.3396.1 ID=mRNA_M-pyrifera_M_contig116369.3396.1|Name=mRNA_M-pyrifera_M_contig116369.3396.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig116369:2..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116369:2..526+ >mRNA_M-pyrifera_M_contig116369.3396.1 ID=mRNA_M-pyrifera_M_contig116369.3396.1|Name=mRNA_M-pyrifera_M_contig116369.3396.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig116369:2..526+ (Macrocystis pyrifera P11B4 male)back to top |