mRNA_M-pyrifera_M_contig116362.3393.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116362.3393.1
Unique NamemRNA_M-pyrifera_M_contig116362.3393.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A067C607_SAPPC (SKIP_SNW domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C607_SAPPC)

HSP 1 Score: 187 bits (474), Expect = 2.900e-53
Identity = 91/149 (61.07%), Postives = 116/149 (77.85%), Query Frame = 1 
Query:   13 QQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENARRGPMMGGGDD 459
            +QR+I+M+E P+DP+QPPK+K KK  RGPGSPPVP++HSPPRKLT +D  AW IPPCISNWKN  GYTI+LDKRLAADGRG+QK  +ND+FASFAE+L  AERKAR+ V  R  ++++L   ++  KE++LR +A  AR     GG DD
Sbjct:  191 EQRIIRMVEAPVDPMQPPKYKHKKAVRGPGSPPVPVLHSPPRKLTVQDQQAWKIPPCISNWKNAKGYTIALDKRLAADGRGLQKVTVNDQFASFAEALAIAERKAREEVNMRANVQKRLDAKQKELKEQELRDLAAKARM-ERSGGRDD 338
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A5B8MT36_9CHLO (SNW/SKI-interacting protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MT36_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 3.880e-53
Identity = 90/152 (59.21%), Postives = 121/152 (79.61%), Query Frame = 1 
Query:   16 QRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR--RGPMMGGGDDFD 465
            QRVI++ E  +DPL+PPKFK K++ RGPGSPPVP+MHSPPRKLT++D + W IPPCISNWKN+ GYTI LDKRLAADGRG+Q+  IND FA  +E+LY AE KAR+ +E R +I++++L  E+ +KE+QLR++A+ AR  R  ++G G  +D
Sbjct:  200 QRVIRISEAHVDPLEPPKFKHKRIPRGPGSPPVPVMHSPPRKLTQQDQEDWKIPPCISNWKNRKGYTIPLDKRLAADGRGLQEVAINDNFAKLSEALYVAEGKAREAIEMRSKIQKEILAKEKSKKEDQLRQLAQKARMERTGLVGQGPSYD 351
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BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A7S3ASV3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASV3_9EUKA)

HSP 1 Score: 182 bits (461), Expect = 4.900e-53
Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1 
Query:   19 RVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            RVI+M+E P+DP++PPKFK K+V RGP SPPVP+MHSPPRK+T +D   W IPPCISNWKN  GYTI LDKRLAADGRG+Q+ QI+D FA  +ESLY AER AR+ VEKR  I++K+   ++  KEE+LR +A+ AR
Sbjct:   20 RVIRMVEAPVDPMEPPKFKHKRVPRGPPSPPVPVMHSPPRKITLKDQQDWKIPPCISNWKNIKGYTIPLDKRLAADGRGLQEVQISDNFAKLSESLYIAERNAREEVEKRATIQKKIAAKDKERKEEELRSLAQRAR 156
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A2B7XKZ7_9EURO (Pre-mRNA-processing protein 45 n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7XKZ7_9EURO)

HSP 1 Score: 186 bits (473), Expect = 8.850e-53
Identity = 90/143 (62.94%), Postives = 112/143 (78.32%), Query Frame = 1 
Query:    1 TDATQQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            T     R+IK++E  IDP++PPKFK KK+ RGP SPP P+MHSPPRKLT ED +AW IPP +SNWKN  GYT+ LDKRLAADGRG+Q   INDKFA FAE+L+TA+R ARD V++R Q++QKL E E+ +KEE LR +A+ AR
Sbjct:  207 TSHKSDRIIKIVERQIDPMEPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAEDQEAWRIPPAVSNWKNPKGYTVPLDKRLAADGRGLQDVAINDKFAQFAEALFTADRHARDEVKQRAQMQQKLAEKEKTQKEEHLRALAQKAR 349
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A1V9ZIE0_9STRA (Puff-specific protein Bx42-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIE0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.670e-52
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:   13 QQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            +QR+I+M+E P+DP+QPPK+K KK  RGPGSPPVP+MHSPPRKLT +D  +W IPPCISNWKN  GYTI+LDKRLAADGRG+QK  +ND+FASFAE+L  AERKAR+ V  R  ++++L   ++  KE++LR +A  AR
Sbjct:  193 EQRIIRMVEAPVDPMQPPKYKHKKAVRGPGSPPVPVMHSPPRKLTVQDQQSWKIPPCISNWKNAKGYTIALDKRLAADGRGLQKVTVNDQFASFAEALAIAERKAREEVNMRANVQKRLDAKQKELKEQELRDLAAKAR 331
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A1V9YZV9_9STRA (Puff-specific protein Bx42-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZV9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.150e-52
Identity = 87/135 (64.44%), Postives = 110/135 (81.48%), Query Frame = 1 
Query:   13 QQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMA 417
            +QR+I+M+E P+DP+QPPK+K KK  RGPGSPPVP++HSPPRKLT +D  AW IPPCISNWKN  GYTI+LDKRLAADGRG+QK  +N+KFAS AESL  AERKAR+ +  R ++++ L E  ++EKE+QLR  A
Sbjct:  187 EQRIIRMVEAPVDPIQPPKYKHKKAVRGPGSPPVPVLHSPPRKLTVQDQQAWKIPPCISNWKNAKGYTIALDKRLAADGRGLQKVTVNNKFASLAESLAIAERKAREEISTRGRMQKLLDEKHKQEKEQQLREKA 321
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A6B2L2P9_9EUKA (SKIP_SNW domain-containing protein (Fragment) n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2P9_9EUKA)

HSP 1 Score: 182 bits (462), Expect = 2.510e-52
Identity = 87/137 (63.50%), Postives = 108/137 (78.83%), Query Frame = 1 
Query:   19 RVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            R+I+M+E+PIDP++PPKFK  KV RGP SPPVP+MHSPPRKL+KE+ DAW IPPCISNWKN  G+ I LDKRLAADGRG+Q+P IND FA  +E+LY AER AR+ V +R  ++ KL   +  EKEE+LR +A  AR
Sbjct:  120 RIIRMVEMPIDPIEPPKFKHTKVPRGPSSPPVPVMHSPPRKLSKEERDAWRIPPCISNWKNNKGFVIPLDKRLAADGRGLQEPTINDTFAKLSEALYIAERNAREEVSRRNSVRHKLELQKTVEKEEELRNLAIQAR 256
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: A0A8N4IA05_ELAGV (SNW/SKI-interacting protein A-like n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A8N4IA05_ELAGV)

HSP 1 Score: 177 bits (448), Expect = 4.010e-52
Identity = 82/139 (58.99%), Postives = 111/139 (79.86%), Query Frame = 1 
Query:   13 QQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            ++R+I+M+E+P+DPL+PPKFK K+V +  GSPPVP+MHSPPR +T +D   W IPPCISNWKN  GYTI LDKRLAADGRG+Q+ QIND FA  +E+LY AE+KAR+ V  R +I+++L+  E+  KE++LR +A+ AR
Sbjct:  118 KERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKIQKELMLKEKERKEQELRALAQKAR 256
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BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: R7Z583_CONA1 (Pre-mRNA-processing protein 45 n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7Z583_CONA1)

HSP 1 Score: 184 bits (466), Expect = 6.380e-52
Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 1 
Query:    1 TDATQQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENARRGPMMGGG 453
            T   Q R+ K++E  IDPL+PPKFK KK+ RGP SPP P+MHSPPRKLT ED + W IPP +SNWKN  GYT+ LDKRLAADGRG+Q   INDKFA F+E+L+TA+R AR+ V++RQ ++QKL E E+ +KEE LR +A+ AR      GG
Sbjct:  197 TSKKQDRLFKIVERQIDPLEPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAEDQEMWKIPPPVSNWKNPKGYTVPLDKRLAADGRGLQDVTINDKFAQFSEALFTADRHAREEVKQRQLMQQKLAEKEKAQKEEHLRMLAQRAREERAAAGG 347
[Close]
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Match: E4URR1_ARTGP (Pre-mRNA-processing protein 45 n=12 Tax=Arthrodermataceae TaxID=34384 RepID=E4URR1_ARTGP)

HSP 1 Score: 184 bits (466), Expect = 6.990e-52
Identity = 88/143 (61.54%), Postives = 114/143 (79.72%), Query Frame = 1 
Query:    1 TDATQQRVIKMIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPPCISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKARDMVEKRQQIKQKLLENERREKEEQLRRMAENAR 429
            T+    R++K++E  IDPL+PPKFK KK+ RGP SPP P++HSPPRKLT ED +AW IPP +SNWKN  GYT+ LDKRLAADGRG+Q   INDKFA FAE+L+TA+R AR+ V++R Q++QKL E E+ +KEE LR++A+ AR
Sbjct:  204 TNRKNDRIMKIVEKQIDPLEPPKFKHKKIPRGPPSPPPPVLHSPPRKLTAEDQEAWRIPPPVSNWKNPKGYTVPLDKRLAADGRGLQDVSINDKFAQFAEALFTADRHAREEVKQRAQMQQKLAEKEKAKKEEHLRQLAQKAR 346
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116362.3393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067C607_SAPPC2.900e-5361.07SKIP_SNW domain-containing protein n=2 Tax=Saprole... [more]
A0A5B8MT36_9CHLO3.880e-5359.21SNW/SKI-interacting protein n=1 Tax=Chloropicon pr... [more]
A0A7S3ASV3_9EUKA4.900e-5363.50Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A2B7XKZ7_9EURO8.850e-5362.94Pre-mRNA-processing protein 45 n=1 Tax=Polytolypa ... [more]
A0A1V9ZIE0_9STRA1.670e-5262.59Puff-specific protein Bx42-like n=1 Tax=Achlya hyp... [more]
A0A1V9YZV9_9STRA2.150e-5264.44Puff-specific protein Bx42-like n=1 Tax=Thraustoth... [more]
A0A6B2L2P9_9EUKA2.510e-5263.50SKIP_SNW domain-containing protein (Fragment) n=2 ... [more]
A0A8N4IA05_ELAGV4.010e-5258.99SNW/SKI-interacting protein A-like n=1 Tax=Elaeis ... [more]
R7Z583_CONA16.380e-5259.60Pre-mRNA-processing protein 45 n=1 Tax=Coniosporiu... [more]
E4URR1_ARTGP6.990e-5261.54Pre-mRNA-processing protein 45 n=12 Tax=Arthroderm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116362contigM-pyrifera_M_contig116362:25..558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.5
Seed ortholog evalue1.3e-42
Seed eggNOG ortholog112098.XP_008614895.1
Preferred nameSNW1
KEGG koko:K06063
KEGG Pathwayko03040,ko04330,ko05169,ko05203,map03040,map04330,map05169,map05203
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000350,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000785,GO:0000974,GO:0001101,GO:0001700,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003714,GO:0003723,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006970,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0007276,GO:0007281,GO:0007399,GO:0007444,GO:0007517,GO:0007519,GO:0007610,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0008593,GO:0008630,GO:0009058,GO:0009059,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010228,GO:0010467,GO:0010468,GO:0010555,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010720,GO:0012501,GO:0014706,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016604,GO:0016607,GO:0017015,GO:0018130,GO:0018991,GO:0019098,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030511,GO:0030522,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033120,GO:0033554,GO:0033993,GO:0034399,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035214,GO:0035257,GO:0035258,GO:0035295,GO:0035556,GO:0035821,GO:0035914,GO:0036002,GO:0040011,GO:0040025,GO:0042221,GO:0042303,GO:0042752,GO:0042771,GO:0042809,GO:0042974,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0043902,GO:0043903,GO:0043921,GO:0043923,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045747,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046332,GO:0046483,GO:0046782,GO:0047484,GO:0048024,GO:0048026,GO:0048384,GO:0048385,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050434,GO:0050681,GO:0050684,GO:0050685,GO:0050767,GO:0050769,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051427,GO:0051569,GO:0051571,GO:0051702,GO:0051704,GO:0051716,GO:0051817,GO:0051851,GO:0051960,GO:0051962,GO:0052312,GO:0052472,GO:0060065,GO:0060255,GO:0060284,GO:0060429,GO:0060537,GO:0060538,GO:0061061,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0070562,GO:0070564,GO:0070887,GO:0071007,GO:0071013,GO:0071014,GO:0071141,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071704,GO:0071826,GO:0071840,GO:0072331,GO:0072332,GO:0080090,GO:0080134,GO:0090092,GO:0090100,GO:0090287,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097659,GO:0140110,GO:1901000,GO:1901002,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902584,GO:1902679,GO:1902680,GO:1903311,GO:1903313,GO:1903506,GO:1903507,GO:1903508,GO:1903844,GO:1903846,GO:1905269,GO:1990904,GO:2000026,GO:2000028,GO:2000070,GO:2000112,GO:2000113,GO:2000241,GO:2001141,GO:2001252
EggNOG free text desc.generation of catalytic spliceosome for second transesterification step
EggNOG OGsKOG2441@1,KOG2441@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons1
Model size534
Cds size504
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.708872-UTR-M-pyrifera_M_contig116362:24..541622815680.708872-UTR-M-pyrifera_M_contig116362:24..54Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116362 25..54 +
1692277518.9515285-UTR-M-pyrifera_M_contig116362:24..541692277518.9515285-UTR-M-pyrifera_M_contig116362:24..54Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116362 25..54 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815680.7238178-CDS-M-pyrifera_M_contig116362:54..5581622815680.7238178-CDS-M-pyrifera_M_contig116362:54..558Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116362 55..558 +
1692277518.9648316-CDS-M-pyrifera_M_contig116362:54..5581692277518.9648316-CDS-M-pyrifera_M_contig116362:54..558Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116362 55..558 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116362.3393.1prot_M-pyrifera_M_contig116362.3393.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116362 55..558 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116362.3393.1

>prot_M-pyrifera_M_contig116362.3393.1 ID=prot_M-pyrifera_M_contig116362.3393.1|Name=mRNA_M-pyrifera_M_contig116362.3393.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
MIEIPIDPLQPPKFKAKKVARGPGSPPVPIMHSPPRKLTKEDHDAWNIPP
CISNWKNKNGYTISLDKRLAADGRGMQKPQINDKFASFAESLYTAERKAR
DMVEKRQQIKQKLLENERREKEEQLRRMAENARRGPMMGGGDDFDSESDV
SEDEEADEEHRQSMAAKQ
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mRNA from alignment at M-pyrifera_M_contig116362:25..558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116362.3393.1 ID=mRNA_M-pyrifera_M_contig116362.3393.1|Name=mRNA_M-pyrifera_M_contig116362.3393.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig116362:25..558+ (Macrocystis pyrifera P11B4 male)
ACAGATGCTACGCAGCAGAGGGTAATCAAGATGATAGAGATCCCGATCGA
CCCCCTCCAACCACCCAAGTTCAAGGCCAAGAAGGTTGCAAGGGGCCCTG
GCTCTCCACCAGTGCCGATCATGCACTCGCCGCCTCGGAAGCTCACGAAG
GAGGACCACGACGCCTGGAACATCCCACCGTGCATCTCCAACTGGAAGAA
CAAGAACGGATACACCATCTCTCTCGACAAGAGGCTCGCAGCCGATGGAA
GAGGCATGCAGAAGCCGCAGATCAACGACAAGTTCGCCTCCTTTGCCGAG
TCGCTCTACACGGCCGAAAGGAAGGCAAGAGACATGGTGGAGAAGCGCCA
GCAGATCAAGCAGAAGCTCCTCGAGAACGAGAGACGTGAGAAGGAGGAGC
AGCTCCGCCGCATGGCAGAGAACGCTCGCCGTGGCCCGATGATGGGCGGC
GGTGACGACTTCGACTCCGAGTCCGATGTTTCCGAGGACGAGGAGGCCGA
CGAGGAGCACAGACAGAGCATGGCAGCCAAGCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116362:25..558+

>mRNA_M-pyrifera_M_contig116362.3393.1 ID=mRNA_M-pyrifera_M_contig116362.3393.1|Name=mRNA_M-pyrifera_M_contig116362.3393.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig116362:25..558+ (Macrocystis pyrifera P11B4 male)
ATGATAGAGATCCCGATCGACCCCCTCCAACCACCCAAGTTCAAGGCCAA
GAAGGTTGCAAGGGGCCCTGGCTCTCCACCAGTGCCGATCATGCACTCGC
CGCCTCGGAAGCTCACGAAGGAGGACCACGACGCCTGGAACATCCCACCG
TGCATCTCCAACTGGAAGAACAAGAACGGATACACCATCTCTCTCGACAA
GAGGCTCGCAGCCGATGGAAGAGGCATGCAGAAGCCGCAGATCAACGACA
AGTTCGCCTCCTTTGCCGAGTCGCTCTACACGGCCGAAAGGAAGGCAAGA
GACATGGTGGAGAAGCGCCAGCAGATCAAGCAGAAGCTCCTCGAGAACGA
GAGACGTGAGAAGGAGGAGCAGCTCCGCCGCATGGCAGAGAACGCTCGCC
GTGGCCCGATGATGGGCGGCGGTGACGACTTCGACTCCGAGTCCGATGTT
TCCGAGGACGAGGAGGCCGACGAGGAGCACAGACAGAGCATGGCAGCCAA
GCAGATGATAGAGATCCCGATCGACCCCCTCCAACCACCCAAGTTCAAGG
CCAAGAAGGTTGCAAGGGGCCCTGGCTCTCCACCAGTGCCGATCATGCAC
TCGCCGCCTCGGAAGCTCACGAAGGAGGACCACGACGCCTGGAACATCCC
ACCGTGCATCTCCAACTGGAAGAACAAGAACGGATACACCATCTCTCTCG
ACAAGAGGCTCGCAGCCGATGGAAGAGGCATGCAGAAGCCGCAGATCAAC
GACAAGTTCGCCTCCTTTGCCGAGTCGCTCTACACGGCCGAAAGGAAGGC
AAGAGACATGGTGGAGAAGCGCCAGCAGATCAAGCAGAAGCTCCTCGAGA
ACGAGAGACGTGAGAAGGAGGAGCAGCTCCGCCGCATGGCAGAGAACGCT
CGCCGTGGCCCGATGATGGGCGGCGGTGACGACTTCGACTCCGAGTCCGA
TGTTTCCGAGGACGAGGAGGCCGACGAGGAGCACAGACAGAGCATGGCAG
CCAAGCAG
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