prot_M-pyrifera_M_contig11633.3383.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11633.3383.1
Unique Nameprot_M-pyrifera_M_contig11633.3383.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length188
Homology
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.010e-80
Identity = 140/186 (75.27%), Postives = 148/186 (79.57%), Query Frame = 0
Query:    2 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 187
            SKITREELE QRQLLVDLRHEIGELKSIHQAGVVG+KGGGTRGGYGTAMPASEFFKQEARTGG TAVA+APP GKLT EQHVRIQQ IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQ                              LK+VR+ADKFCMDIMCILLLLG++AVLY V+  +
Sbjct:  109 SKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQ-IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.940e-33
Identity = 85/186 (45.70%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    2 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 187
            SK+T+EE+E +RQLLVDL+ EI ELK+++Q   VG+  G     Y    P        A  GG    A+  PA  L++EQH RIQQ IR+R KEME+ YL+ +EEHVDRLG++A+ + EEL                               LK VRAADKFC+DIMC+LL+LGL AVLY VI N 
Sbjct:  115 SKMTKEEMEARRQLLVDLQREIAELKALNQQAAVGASVGVASSAYAAFKPQDSAA---ALAGGAKGGAEVRPAN-LSNEQHYRIQQ-IRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295          
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S2UZ99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ99_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.830e-7
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 0
Query:   77 LTSEQHVRIQQ-QIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 187
            +T++Q  R++Q QIRD  K+M+D++LT + E VD + E+A    EE++                              LK VR ADK CMDI+CI++++ +V ++Y +  NS
Sbjct:    7 MTADQRRRLEQLQIRD--KQMDDEHLTKIGEAVDDIKEIALAANEEVKLQSVMIDNLGNRIDIANTHAESVNTKLKETLKKVRGADKLCMDIICIVIMVAMVGIIYSLYKNS 116          
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.190e-7
Identity = 52/179 (29.05%), Postives = 86/179 (48.04%), Query Frame = 0
Query:    2 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVL 180
            SK T EE+  +  ++ D++  +  LK+   A   G +   ++     A       +Q A +GG  A +      +++S+Q+ R+ Q I+   +EM DK + ++ E V+ LG +AK + EELQ                              LK VR +DK C+DI+C+LLLLGL+ V+
Sbjct:  130 SKFTAEEIRSRTAIVRDIKDHLDTLKAQFTASYSGVQMDASQTLPSFASLKRSIDQQSASSGGQGAASVVVEQERISSQQNQRLAQ-IQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVM 306          
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: W7UCC1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCC1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.620e-5
Identity = 51/187 (27.27%), Postives = 82/187 (43.85%), Query Frame = 0
Query:    2 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSV-RAADKFCMDIMCILLLLGLVAVLYGVINNS 187
            SK + EELE + +++  +  EI ELK +  AG +  K   T G  G   P  E        G      D        +E H    QQI+ R K+++ +YL  +E+ V+ L ++A    E ++                              L  V R +DK C+D++CI++LLG++ V+Y +  NS
Sbjct:  156 SKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN-TPGAVGLFAPVEESDAFRGPIGMLPMQTDM-------TESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334          
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S1TVQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVQ5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 4.940e-5
Identity = 52/178 (29.21%), Postives = 77/178 (43.26%), Query Frame = 0
Query:    8 ELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTA----VADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLY 181
            EL Q+ + + DLR E+  L+   +A +  S     R      M  SE FK      GT       A       +T+EQ  ++Q  +  R+ E+++KY+  + E +D L E A+N  E L+                              L   R +DK CMDIMCI+ +LGL+ VLY
Sbjct:  116 ELPQRSKDVADLRRELDRLRDERRALLNPSYKANRRNV--NRMEDSELFKATGDGDGTVNPSGYAAGQSANNNMTAEQKQQLQA-LEARENEIDEKYVAQIGEGLDYLLEKAENFGERLREQDRKITEIQEKADEVTDRLETVNGSMKETLNKARGSDKICMDIMCIMAMLGLIGVLY 290          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE1.010e-8075.27t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA1.940e-3345.70Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2UZ99_9STRA1.830e-733.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RAR9_9STRA5.190e-729.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7UCC1_9STRA1.620e-527.27Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1TVQ5_9STRA4.940e-529.21Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..29
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableGENE3D1.20.5.110coord: 98..159
e-value: 9.9E-13
score: 49.8
NoneNo IPR availablePANTHERPTHR19957:SF258coord: 4..179
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 4..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..184
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 87..153
NoneNo IPR availableTMHMMTMhelixcoord: 167..184
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 127..178
e-value: 5.2E-7
score: 29.6
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 91..153
score: 10.574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11633contigM-pyrifera_M_contig11633:139..9030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11633.3383.1mRNA_M-pyrifera_M_contig11633.3383.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11633 139..9030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11633.3383.1 ID=prot_M-pyrifera_M_contig11633.3383.1|Name=mRNA_M-pyrifera_M_contig11633.3383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
QSKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAM
PASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKY
LTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDMAQEHVGNVNTRM
KEVLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom