|
|
Homology
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.010e-80 Identity = 140/186 (75.27%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 4 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 561
SKITREELE QRQLLVDLRHEIGELKSIHQAGVVG+KGGGTRGGYGTAMPASEFFKQEARTGG TAVA+APP GKLT EQHVRIQQ IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQ LK+VR+ADKFCMDIMCILLLLG++AVLY V+ +
Sbjct: 109 SKITREELENQRQLLVDLRHEIGELKSIHQAGVVGAKGGGTRGGYGTAMPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQ-IRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.940e-33 Identity = 85/186 (45.70%), Postives = 108/186 (58.06%), Query Frame = 1
Query: 4 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 561
SK+T+EE+E +RQLLVDL+ EI ELK+++Q VG+ G Y P A GG A+ PA L++EQH RIQQ IR+R KEME+ YL+ +EEHVDRLG++A+ + EEL LK VRAADKFC+DIMC+LL+LGL AVLY VI N
Sbjct: 115 SKMTKEEMEARRQLLVDLQREIAELKALNQQAAVGASVGVASSAYAAFKPQDSAA---ALAGGAKGGAEVRPAN-LSNEQHYRIQQ-IRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S2UZ99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ99_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.830e-7 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 229 LTSEQHVRIQQ-QIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS 561
+T++Q R++Q QIRD K+M+D++LT + E VD + E+A EE++ LK VR ADK CMDI+CI++++ +V ++Y + NS
Sbjct: 7 MTADQRRRLEQLQIRD--KQMDDEHLTKIGEAVDDIKEIALAANEEVKLQSVMIDNLGNRIDIANTHAESVNTKLKETLKKVRGADKLCMDIICIVIMVAMVGIIYSLYKNS 116
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.190e-7 Identity = 52/179 (29.05%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 4 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVL 540
SK T EE+ + ++ D++ + LK+ A G + ++ A +Q A +GG A + +++S+Q+ R+ Q I+ +EM DK + ++ E V+ LG +AK + EELQ LK VR +DK C+DI+C+LLLLGL+ V+
Sbjct: 130 SKFTAEEIRSRTAIVRDIKDHLDTLKAQFTASYSGVQMDASQTLPSFASLKRSIDQQSASSGGQGAASVVVEQERISSQQNQRLAQ-IQATDREM-DKTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVM 306
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: W7UCC1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCC1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.620e-5 Identity = 51/187 (27.27%), Postives = 82/187 (43.85%), Query Frame = 1
Query: 4 SKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSV-RAADKFCMDIMCILLLLGLVAVLYGVINNS 561
SK + EELE + +++ + EI ELK + AG + K T G G P E G D +E H QQI+ R K+++ +YL +E+ V+ L ++A E ++ L V R +DK C+D++CI++LLG++ V+Y + NS
Sbjct: 156 SKFSPEELEMRGKMVSQMMSEIQELKELSLAGYIRKKNN-TPGAVGLFAPVEESDAFRGPIGMLPMQTDM-------TESHQMQLQQIQQRDKDLDTQYLDQIEKGVEDLRDIALRANEGIKTTNVMLENLEQKIIGVQDHLDRVNKKMKNTLDQVGRRSDKLCIDVVCIVILLGMIGVMYNLGKNS 334
BLAST of mRNA_M-pyrifera_M_contig11633.3383.1 vs. uniprot
Match: A0A7S1TVQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVQ5_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 4.940e-5 Identity = 52/178 (29.21%), Postives = 77/178 (43.26%), Query Frame = 1
Query: 22 ELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAMPASEFFKQEARTGGTTA----VADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSVRAADKFCMDIMCILLLLGLVAVLY 543
EL Q+ + + DLR E+ L+ +A + S R M SE FK GT A +T+EQ ++Q + R+ E+++KY+ + E +D L E A+N E L+ L R +DK CMDIMCI+ +LGL+ VLY
Sbjct: 116 ELPQRSKDVADLRRELDRLRDERRALLNPSYKANRRNV--NRMEDSELFKATGDGDGTVNPSGYAAGQSANNNMTAEQKQQLQA-LEARENEIDEKYVAQIGEGLDYLLEKAENFGERLREQDRKITEIQEKADEVTDRLETVNGSMKETLNKARGSDKICMDIMCIMAMLGLIGVLY 290
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 254.6 |
| Seed ortholog evalue | 3.6e-65 |
| Seed eggNOG ortholog | 2880.D8LE18 |
| Preferred name | SYP71 |
| KEGG ko | ko:K08506 |
| KEGG Pathway | ko04130,map04130 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000149,GO:0003674,GO:0005215,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005911,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006906,GO:0006996,GO:0008104,GO:0008150,GO:0008565,GO:0009506,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0022406,GO:0030054,GO:0031201,GO:0031224,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055044,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0090174,GO:0098796,GO:0140056 |
| EggNOG free text desc. | SNAP receptor activity |
| EggNOG OGs | 28JTR@1,2QS7N@2759 |
| Ec32 ortholog description | Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) |
| Ec32 ortholog | Ec-05_004390.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131 |
| Exons | 5 |
| Model size | 564 |
| Cds size | 564 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815680.176478-CDS-M-pyrifera_M_contig11633:138..313 | 1622815680.176478-CDS-M-pyrifera_M_contig11633:138..313 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 139..313 + |
| 1692277518.6869972-CDS-M-pyrifera_M_contig11633:138..313 | 1692277518.6869972-CDS-M-pyrifera_M_contig11633:138..313 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 139..313 + |
| 1622815680.1899374-CDS-M-pyrifera_M_contig11633:1573..1659 | 1622815680.1899374-CDS-M-pyrifera_M_contig11633:1573..1659 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 1574..1659 + |
| 1692277518.7115052-CDS-M-pyrifera_M_contig11633:1573..1659 | 1692277518.7115052-CDS-M-pyrifera_M_contig11633:1573..1659 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 1574..1659 + |
| 1622815680.203118-CDS-M-pyrifera_M_contig11633:7593..7692 | 1622815680.203118-CDS-M-pyrifera_M_contig11633:7593..7692 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 7594..7692 + |
| 1692277518.719504-CDS-M-pyrifera_M_contig11633:7593..7692 | 1692277518.719504-CDS-M-pyrifera_M_contig11633:7593..7692 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 7594..7692 + |
| 1622815680.2183099-CDS-M-pyrifera_M_contig11633:8060..8153 | 1622815680.2183099-CDS-M-pyrifera_M_contig11633:8060..8153 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 8061..8153 + |
| 1692277518.7393727-CDS-M-pyrifera_M_contig11633:8060..8153 | 1692277518.7393727-CDS-M-pyrifera_M_contig11633:8060..8153 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 8061..8153 + |
| 1622815680.232356-CDS-M-pyrifera_M_contig11633:8919..9030 | 1622815680.232356-CDS-M-pyrifera_M_contig11633:8919..9030 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 8920..9030 + |
| 1692277518.7496576-CDS-M-pyrifera_M_contig11633:8919..9030 | 1692277518.7496576-CDS-M-pyrifera_M_contig11633:8919..9030 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11633 8920..9030 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11633.3383.1 >prot_M-pyrifera_M_contig11633.3383.1 ID=prot_M-pyrifera_M_contig11633.3383.1|Name=mRNA_M-pyrifera_M_contig11633.3383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
QSKITREELEQQRQLLVDLRHEIGELKSIHQAGVVGSKGGGTRGGYGTAM PASEFFKQEARTGGTTAVADAPPAGKLTSEQHVRIQQQIRDRKKEMEDKY LTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDMAQEHVGNVNTRM KEVLKSVRAADKFCMDIMCILLLLGLVAVLYGVINNS* back to topmRNA from alignment at M-pyrifera_M_contig11633:139..9030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig11633.3383.1 ID=mRNA_M-pyrifera_M_contig11633.3383.1|Name=mRNA_M-pyrifera_M_contig11633.3383.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8892bp|location=Sequence derived from alignment at M-pyrifera_M_contig11633:139..9030+ (Macrocystis pyrifera P11B4 male) CAGAGCAAAATCACCCGAGAAGAGCTGGAGCAGCAGCGGCAATTGCTGGT
CGACCTTCGACATGAGATCGGAGAGCTTAAGAGCATCCACCAGGCGGGAG
TTGTAGGGTCGAAGGGAGGGGGTACTCGAGGGGGCTACGGGACGGCGATG
CCCGCGTCGGAGTTCTTCAAGCAAGGTTGGTCGAGCTAAGGGTCTAACTA
ACGAGCGCAAGCCTTGCGTCAAGGCTTAGGTTAGCTAACGAGCATACAGT
ATTATACCTGTACAATATGTTCCACGAGCAAGGTTTGTCGAGCTAGGGGT
AACTAACGAGCGATGCGTTGATTGATGTGAGCAGTGGGTGCGGCGAGGAA
TGCCATATATAAACAAAGCGAGTTTACTTAGGTCGAGATAGAGTTTTCTG
AAGCGCAGTGGAAACGGGTGAGCAACGAGCAGAAAGTTTGGAGCTTTCGG
GAGGGAGGGAGGGAGGGAGGAAGGGGGGAGTAGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGCAAAACAAAAAAGACGCGCGGCCGGCCCCTCCC
CCCCCCTCTACGACACGCACCACAAACTATGTGGGGGNNNNNNNNNNGGG
GGAGGGATAGAAGGCGAGTAGTGGTGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGAGGGAGGGAGAG
ATATATACAAGAACGATCAGCCAGTCCATTAACCCCGATCTACTAGACCG
ACTACTAATTATGTAGTGGTTGCGCATTCCGCATGGGTCACAATCTACAA
CCTTCGCTTAGCGCAGCCCATTAAGAAAAAACAAGGCGCGCTTTTGCGCA
TTTTGTCCGAAACTTTTCTGACTGACGGAACTTCTCAAATGAGGAACTAC
CGGGTATCTACTGTAGTATACCTATTTTGTCGCACCATAGTATTCGGTGC
GCTGTGTTCACCATTTGCTTTTTTTTTCATGATTTATTCATGTCCACATA
TACTGCTCTACAACCGAGTCCCCCAAAAAAAGGGTGGGAGCTTTTTTAGT
TTCACTCATCCGCCGGAGGATTATTGAAAAAAAAGGACGAAACAAGGAAA
AGAAAAATACCGTACGTACGACGCGCAAAGTGTATGCACGGTAGGGTATA
TATCATACATGGTAGCTGGGTGTATCGTACGTCTCGCGCGCCAAAGGTGG
CGAAGCGTCGTGCTTCCCCAGCCGAAGTTTGTTTTTTTGTTACACAATGT
TTTGTCGAGTCTTCCTACGTATGGCTCCAGCGTTTTTTTTTTTTGGACCA
TCCACCAGATTATAGCGGCGAGTTAAGGTGATAGTGACAGCAACAAAGTA
CAGGCACCGTTGTCCCCGCACCACATTGCTATTCAGTAATTTTTCCTTCT
GGCATTGGTTGCTTTGTCTGTGTTCGCTTTCGCAGAGGCGCGAACAGGAG
GGACGACGGCCGTAGCAGACGCGCCCCCAGCAGGAAAATTGACGTCGGAG
CAGCACGTGCGAATTCAACAGGTAAGAATCACGAATCGCGCCTGCACGTC
ACCTACAAAACAATTTTCGCATGTACGAGGTATGGAAACGGACAACAAGC
GTCGACGGTATGTGTTGTGTGCTCAAAGAGTTTGGTGGAGCAACCACAAC
AGCAGTCAGGGCGTGTCGTAACCCTCTCCGCAGAGCGTGGGAACGAGCGG
AACGGAACGAGGCTGTTCGTGGTCATTCGTTCCATTCCTGTGTAAAAAAA
AACGTATTTAGGTTCCATGCAGAACCCTGGGTCTCGCCAGCCGAATCAGC
ACGAACGGTATCGTTCGCGCATGGCACGACACCAACACGCTGTTGTGCGC
ATATTGGTGTCCACGTCCATCTTCGGTGGTGCCCATCTACATCAAACGTG
ATGCTATTTGTTCCCGTTCGGTCGGGCCGTTCGGTCCTCCCAAACAAGAA
AGCAAAAGGGTGCAAGACTTCTTCCTCGTCTAAGATGTACTGTTTTTCTC
GTTTTCCATTACCAATCCGCACCAATTCATGCGGCGAACAATTTTCGATT
CGGTTCGGCCCAATGCTCTTTGCAAGGGGTTAAGACACGCCCTGAGTGAC
CATACTACAGTAATGCGACCTGAGGGAGGAGGGGCGTTTTTATTTGTTGC
TTGTCTTGAGTCACTTGACCATTGACCATGCATCCCTTTTACTGTTCCTG
GTAGGGACACCTCCGACATTTGGGCGCTCACTACGTTTTGTTCCAAACCT
GGTGTATTACATAAACACGGTGTGCCCGTTTTATCCCCTTCCTGTTTCGC
CTTTTGTGGCCACCATGTCTCCTAGGATATATAGGGATCGTTTTTCCGGT
ATTATCTAGTGTACTAAACTTGTCCGCATCCCATTCGTCTCTGTGTGTGT
GGGGGGGATAGAGCAGTGCTGTGCCTTGATCGAGGCCATGATGCCTTTTG
GTGTTACTAACCAATGGTTTGCGTGTTGGCGGGGGGGGGGGGGGGGGGGG
GCGCGACACGAGGCACGCTGTTTTTGTTGAGGGGCGTCAAAGCGCGCGAG
AGCGTATTACAGAAGGCGGGGGCGGGGGGTTTGGGGGTCGCCCNNNNNNN
NNNTTGTGTGTGTGGTTGGTTGGTGTGGGGGTGGGGGGCGGGGCGGGGGT
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGCGCAGCACAAGTGACA
CGTTTTTGGTTCATAGGACTTCAACAGCCTCGACGCCATTTATAGACAAG
AGGTTGCCGAGGTTTCAGCTGTCACTCACAGAATTTTAGCTGTTGTCCAT
AGGGTCTCAGCTGTCTTACAAAGGATCTCAGCTGCTACCCCAAGGGTCAC
AGTTGTTACCCAAAGGGTCCCAGTTCTTACCCAACAGGTCCCAGCTGTTA
CCCCAAAGGGGTCCCAATTTGTAACCAAAAGGTCCCATTTGTTTCCCAAA
TGGTCGTCGCTGTTACATCTAATGTGTATAACTCAAATCATCTCCACGGT
TTCTCAAAGGATCTCAGCTGTTCCAAGAGTCTCAGCTGTCACATAGACCT
CAGATGTTATACCGAAAGGGTCCGAGATGTTACCCAAAGGGTCCGAGTTT
TTCCCCAACAGGTTCCAGTTGTTACCCAAAAGGGGTCCCAGTCGTTACCC
AAAGGGTCCCAGTTTTACCCAACAGGTCCCAGCTGTTACCAAAAGGGGTC
CCAGTTGTTACCCAAAAGTTCCTATTTGTTTTCCAATTTGTTTTTGGTGT
TGCATCTATTAATAATCGGTGTCAGCTGTTTCCCAAAAGAGTCTCCACGG
TTTCTCAGAAGGGTCTCAGCTGTTCCCAAAGTCTCAGCTGTCACCTTAGG
CCTCAGATGTTACCCAAAAGGTCCCAGTTGTTACCCAACAGGTCCCAGCT
GTTACCCAAAGGGTCCAGCTGTCACCTAAAGGGTCCCAGTTGTTACCAAA
CAGGTCCCAGGTGATACCCAAGAGGAGTCCCAGTTTTCACCCAAAAGGTC
CCATTTGTTCCCCAAAAGGTTTTCGCTGTTACATCTAATGGGTCTCAGCT
GTTACCCAAAGGGACTCCACGGTTTCCGGAAGAGTCTCAGCTGTTCCCAA
AGTCTCAGCTGTCATCTACGTAGGCCTCAGATGTTACCCAAAGGGTCCCA
GCTGTTACCCAAAGGGTCCCAGCTGTTACCTAAAGGGTCCCAGTTGTTGC
CCACACCCAAGGGGGTCCCACTTGTTGCTCAAAAGGTCCCCAGTTGTTTC
CCAAAAGGTCTTCTCGCTGTCATACATCTAATGGGTCTCAGCTGTTACCC
GAAAGGTGTCGGCTTGTTATACCCTCTTTTTTCTCAGATGATACCCCAAG
AGGTGTCAGCGGTTACCAGCATCTCAGATGCTTCCCACAGGGTCGCAGCT
GTTACCTAAATGGGGTTAGGTGTTATCCCCAAGGTGTCTCCGCTCCTACC
CAAAAAGTCTCATCTGTCGCCGATTATAGGCCTCAGCTGTTAGCAAAAGT
CTCAGATGTTTCCCAGAGCGCCCGGGCACCCGGAGGGTCTCAACTGTGTT
ACCCAAAACGTCCCAGCTTCCTACAGAGTTCCAGTTGTTACCCAAAAGGT
ATTAAGCTGTTATTCCCAAAGGGTCTCAGCTGTTACCCACAAGGCCTCAA
CTGCCACCTACCAGGTGGGCCTCAGCTGTTGGCAATGTCTCAGATGCTAC
TCACAGGATTCCAGTTTACCCAAAGGGTCTCAACTGTGTTACCTCAAGGG
TGTCAGTTTTATCCAAAGTGTCTCAGCTGTCACCAAGACCTCAGGTGGTA
CAAAAGCCTCAGACGTTCTCACTGAAAGGGTCCCAGCCGTTACCCAAAGG
GTCTCAGGTGTTACCCACAATGCTCCGGCTGTTACCCCAAAGGTCCTATA
TACAGGCGTTTCCCGAAGAACCGTAGCTGCTACGCCCAATGGGTCCCAGG
TATTTGCCCAAAGGGTCTCAGTTGTTACATAAACTTATCAGCTGTAATCA
AGGCCTCAGCTGCAGCTATTACACAGGGTCTCGGCCCAAGCTGTTACCAA
GATTCCAGCTGTTACACGAAGGGTCTCGGCTGTTATCCAAAACTGTCGCT
AACATGTCATAGTTTACCGAAAGGGTCTCAGCTGATATCCGAAGGGCCTC
CAAAGAGTCTCAGTTGTTACTCGAAGGGCCCCAGCTGTTTCCCGAAGGGT
GTCACCTGTTATCCAAAGCTGTCACTACCGTAAGATATCAGGTGGTTCAC
CGAAGGGTCCCAGCTATTCACCCGCAGGGCCTCAGCTGTTACCCTATGAG
CTTCCTGCATTAGGACCAATTTCCGCCGGACGATTATTTGGCCTCGACCG
AATTCGGAACCATATACGTAGGGGAATAATATTTTCCTAGTGTTGCTGGA
AGTCCGGGTTATGGAGTTTGTGCTCTCGAGATCGAAACGTTTAGCGCCCA
CTAGCGCACGAAAGAGGGCGCGCAACGGGCCGGCAAGCGACGGATAGTGT
GTAGTGTACACGCCCCGTCACCTGAGCGAGAGAATCAGTTTGATCGGCAG
CCACCAGCCCCGTCACTTTGTTTTCCAAGGATTGGAGGGTATATTTTTGT
TTTTTCGGAAAAAATGAGGCCAGACCACCTAAGGCACGTTGATGGCGCGA
TGAAACACAGTCTGATGTCGTTCTTCGCGAGTACGAGGGCATCTCGAAGC
CGCGATCACGAAGAGGTAGGGGCGCGCACGTGGTAGGTCGACGAGGTACC
GGCAAGCTACGGAGAGTGTGTAGTGTACACGGCCCACTGCTTTGGCGAAA
AAAACGGCTTGATCGGCCGCCGTCAGCATTGTAGCGATGCTTGCAAAGAA
CTGACGGTATTTAGGGTCTGTAAAGAACGAACCCAGAGCGCCGGAGACCC
GTAGGACACGTTATGAAGTGCGGAGTCTGCTGCCGCTTTTAGCGAGTACG
AGGGCAACTCGAACCCACCATCACCAAGAGGTGGGAAGCGCATGAGGGCA
ATGGACCATTTTTTATTTCGTCAAGCCACGGAGGGTTTAGTCTAAACGCA
CCGTCATCTGAGCGGAATACTCGGCTTTGATCGCCCGCCAGGAGCCTCCT
AGCGATGTGCTCTAGAATTGGAGAAAAAAAGTGCTCTTTTGGGAAACCGA
GCCCGACCCGTTCGAGGGCGGTAGAAGCAGCGCAAGGGTACGAACCACAG
CAGTCTGCTCCCTTTTTTTTGGCGAGTACGAGGGTATCTCGATGTCGCGA
TCACGAAGAGGTAGTGATCGCACGTAGTCTATGTTACGGCAAGCAAACCG
AGAGGGTGTAGTGCATACGCTCCGTCACCTCAGTGAAAAAATCGGCTCGA
TCTCACACCAACAGCCTTGCAGCGAAGCTTTCCAAGAATAATATATAGCA
TGTTTTCAGGTTGTTTCCTGGAAAGGAGGCCAGATCGTAGAACAGTGTAA
CACTAAACACAGCAGTCTGCTGCGTATTTGGCGAGCAGGAAGATGTGTCG
AAGCCGCGATCGCGAAGAAGGGATGGGGGGACTTGTCACACGCTACCTGC
AGTAGTTGACGTCGCAGCTAGGCTTGTGCCACGTGCTAGCAGCGGTTGGG
TGGTTCCACGTACAGTACGTATATTGCAAAGTAAGATTGTGTTTTTTAGC
CCGGCGGCGCGTTTTTGCCCCGCCGCCTCCCGGCCGGTCTCGTCGCCGAC
CGGCGGGGAATCGGCCTGGGCGCGCACTCTGCGGGTCTCGCCCTCGCTCG
AGGCCCGTGGACGGCGCGCACACTGGAATCATGATGGCTACGAGACTTAC
GCACTTTTCCCACGCCCGCCGCCATCTGAATGGTGCGAAGTCCCGTGCGC
CTACATGGCCTCTCCACCGCCTGAATCCAACCGAAGGAGACCGTTGGCAA
CCGTGCCTGTAACGGTTACCCGACTCTCACGAGCGCTCGCACTGGGTTAG
CCCCGCCCACCCCGGCTTGCTACATCGTCCCACGTGCGTTTTCCAGGTAC
GGGCCCGTGAGAGCCCTCCCCGTGACGGTAGTCGCCATCTTCATCCCATA
CGTCACTATGCACTACCGTACACGAGCAAATGGTGGTACAGTGGTCACAA
ACGTATTGAGTGGTTAACAAAAGTTTTACAACACGAGCGTGTACCGTACG
AAGCCCGACGCTCAGGGCAGCGGTGGTTTATGCAACACAGTTACCCTCGA
GACAACCGATTTTTGAATATCGTCATAGGCGGGAAAAAATGCCAGCCAAA
TAGTAGTGGCCATTGATAAACACTCACGTTTATTATCGTTGGGACTCTTG
TCCGCGTCGACACTGAACACACACGATCGATGCACAGGCGAGGTGGCACG
GGGCTCCGCGGCAGGCCGTCCGTTCTGTAAGCCTATGCCCTCCCCCGGAA
CAAACACACCCGAAGGTGTCAACGGTTATCGAGGTCTCACCTGTTGCCGA
GGCTCGGCTGTCACGAAGACCTCACCTGTTATCAATGTCTCGGATGTTAT
GCGAAGGGTCCCAGCTTATTACCCTAGGGGCCTCACCCGCTGTTTCCAAG
CTTTCAGCCGTTCACTGTTGACCAATATCTCGACTGGTAGCGAAAGGATT
TCACACGCTACCCAAGGGGTCCCAGCTCTTACCCAAAGGGTGTTATTGAT
AGCTGTTATACCCAAAAGGTAGCTGCTACGCAAAACGTCTGAGTTGTTCC
CCAAGGGTCTCAGCTTTTTCCTCGGGGGTCTCAGCTATCGCCCATAGGGT
CGATAAGAATGCTTGCTTGCATGAAGGCTTGGATGCTCGGAAAGCTGGAC
ACCCCCCCGCATTCTGCGACAGGTTTTCGCGGCACCGCGTTGTGTTTTGT
GCTTCCTTCGCTTGCTATATATGTACCGAAATGCCAATCAATCCCTGGTA
CCGTCTTTGCGTCTTGTTCCGGGGAAACCGCGTGGTGGCGGCCGTACGAG
GAGAGCAGATCCGTGATCGCAAGAAGGAGATGGAGGACAAGTACCTCACC
GTCGTTGAGGAGCACGTTGACAGACTCGGGGAGATGGCCAAGAACATACA
AGAGGTCAGTCAGAGTCAATCCACCGTTTGATCAATCAGTCAGTCACTCG
GTTGGTCAATCAGCCAGTCACGCAGCAGTCCATCACTTACTCAACCAATC
GGTCAGTGAATCGAATCAGCCAATCAAACCAACCAAATAAATCCACCAAT
CAAGTTCGTCAGTCACTCAGTCACTCAAGTCAAGCAGTCAATTAATCATA
TCAGCCAATCAATCAACCGAATCAGTCAGGCAATCAATTAACTAGTCAAG
CAGTCAGTCAATTACTTCACCAGTCATTCATTCAGTCAGTCATGAAGCAA
ACGCGAGAACCCGATCCCGAGTTTTTTTTTTCTGTTTTCTGTTTTTTCTG
TTTTTTTTTTAATTTTTAACAGGAGTTGCAAATCCAGGACCGGATGGTGG
ACGACCTCGGCAATCGCATCGACATGGCGCAGGAACACGTTGGCAATGTG
AACACAAGGATGAAGGTCCGTTTCACCTACGAGTCTACTATGCAGTACCC
TGGTACATTGAACGGGGTAGTTTCTGTGCCGGTTTCTGTTGCGTGCCTGC
TGTATCTTTTAACTTGCTGCTGACCAGGTGCCAGGAATCTCTTTTTCGTT
TTTCGTTATTTTGGTTTGGACTTGAAGCAGTATTTCAAGCTTGATAGCAG
TTTGTATTTTTGTACACCTTACAGTACATTTGAACAAATGTTTTCTTTGT
TTCGTCTTATTTTTTATTGTTCTTAGCCCAACCCTCCTCCATGCGACTCG
CCGAATACCTCACGGCGCTTCGCGCTTGTTGCTAGCGATGTCTGCCTGGT
CGGTGAAAACCCGACGTGCTCCGTCCCGGCATTTCAGGGATGCGAGGGTC
TAGTCGTATGGTCATACGACTACGGCCATGCATGATAGTGTGTACACCCC
CCCCCCCCGCCCCCCCATTGCAAGCGTGGAGGGGTCAAGCGCCAAACCGC
CTAGGCAAAGAACCAACCCCACCCACCCCCCCCCCCACACCACCNNNNNN
NNNNAAAACCCTAATGACCCCTTCCCCGCATTTTTGGTAGGTGAGGGTTG
AAGAAATTGGATTTCCCTATACGGACCAACTTGCTAGTTTTTTCCCCCCC
CCCCCCCCCATGCTCCGTCTTGAAAGGGTTGCGTGGTCAATGGTCAAATG
ACTTAGGCAAGCAACAAATTCGTATCCCCCCCCCTCCCCACCGCGCCCTT
GTTTTTCTCTTTCCCAACCCTCCCTCACCAGGAGGTTCTCAAGAGCGTTC
GCGCTGCGGACAAGTTCTGCATGGACATCATGTGCATCCTCCTGTTGCTG
GGGCTGGTGGCCGTCCTTTACGGAGTGATTAATAATTCGTGA back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig11633:139..9030+ >mRNA_M-pyrifera_M_contig11633.3383.1 ID=mRNA_M-pyrifera_M_contig11633.3383.1|Name=mRNA_M-pyrifera_M_contig11633.3383.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig11633:139..9030+ (Macrocystis pyrifera P11B4 male) CAGAGCAAAATCACCCGAGAAGAGCTGGAGCAGCAGCGGCAATTGCTGGT CGACCTTCGACATGAGATCGGAGAGCTTAAGAGCATCCACCAGGCGGGAG TTGTAGGGTCGAAGGGAGGGGGTACTCGAGGGGGCTACGGGACGGCGATG CCCGCGTCGGAGTTCTTCAAGCAAGCAGAGCAAAATCACCCGAGAAGAGC TGGAGCAGCAGCGGCAATTGCTGGTCGACCTTCGACATGAGATCGGAGAG CTTAAGAGCATCCACCAGGCGGGAGTTGTAGGGTCGAAGGGAGGGGGTAC TCGAGGGGGCTACGGGACGGCGATGCCCGCGTCGGAGTTCTTCAAGCAAG AGGCGCGAACAGGAGGGACGACGGCCGTAGCAGACGCGCCCCCAGCAGGA AAATTGACGTCGGAGCAGCACGTGCGAATTCAACAGAGGCGCGAACAGGA GGGACGACGGCCGTAGCAGACGCGCCCCCAGCAGGAAAATTGACGTCGGA GCAGCACGTGCGAATTCAACAGCAGATCCGTGATCGCAAGAAGGAGATGG AGGACAAGTACCTCACCGTCGTTGAGGAGCACGTTGACAGACTCGGGGAG ATGGCCAAGAACATACAAGAGCAGATCCGTGATCGCAAGAAGGAGATGGA GGACAAGTACCTCACCGTCGTTGAGGAGCACGTTGACAGACTCGGGGAGA TGGCCAAGAACATACAAGAGGAGTTGCAAATCCAGGACCGGATGGTGGAC GACCTCGGCAATCGCATCGACATGGCGCAGGAACACGTTGGCAATGTGAA CACAAGGATGAAGGAGTTGCAAATCCAGGACCGGATGGTGGACGACCTCG GCAATCGCATCGACATGGCGCAGGAACACGTTGGCAATGTGAACACAAGG ATGAAGGAGGTTCTCAAGAGCGTTCGCGCTGCGGACAAGTTCTGCATGGA CATCATGTGCATCCTCCTGTTGCTGGGGCTGGTGGCCGTCCTTTACGGAG TGATTAATAATTCGTGAGAGGTTCTCAAGAGCGTTCGCGCTGCGGACAAG TTCTGCATGGACATCATGTGCATCCTCCTGTTGCTGGGGCTGGTGGCCGT CCTTTACGGAGTGATTAATAATTCGTGA back to top
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