mRNA_M-pyrifera_M_contig116242.3371.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: UPI00118A658D (fatty acid CoA ligase family protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118A658D) HSP 1 Score: 372 bits (955), Expect = 4.310e-125 Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIR LAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPV+TSGIDYDWLLGKEWTPFE IQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALV+PE
Sbjct: 64 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRCLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVVTSGIDYDWLLGKEWTPFESIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVNPE 250
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A518A4I4_9PLAN (Long-chain-fatty-acid--CoA ligase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518A4I4_9PLAN) HSP 1 Score: 355 bits (912), Expect = 1.350e-118 Identity = 173/186 (93.01%), Postives = 178/186 (95.70%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDP 558
PGTRMALMVRP LEFIALTFA+FKAGAVIILIDPGMGRKNIIR L+EVEPEGFVAIPLAQLFRK+KRR FPKARLNVTVGKPVLTSGIDY WLLG +WTPFEI+ R RTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPA VDP
Sbjct: 64 PGTRMALMVRPGLEFIALTFAMFKAGAVIILIDPGMGRKNIIRCLSEVEPEGFVAIPLAQLFRKLKRRSFPKARLNVTVGKPVLTSGIDYHWLLGAQWTPFEIVHRTRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPARVDP 249
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A517V9U2_9PLAN (Long-chain-fatty-acid--CoA ligase n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V9U2_9PLAN) HSP 1 Score: 348 bits (894), Expect = 7.230e-116 Identity = 170/187 (90.91%), Postives = 175/187 (93.58%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNI+R LAEVEPEGFVAIPLAQL RK+K R FPKA LNVTVGKPVLTSGIDY WLLG EW PFE++ R TDPAA+IFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPA VDPE
Sbjct: 65 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIMRCLAEVEPEGFVAIPLAQLIRKLKHRSFPKAHLNVTVGKPVLTSGIDYQWLLGGEWEPFEMVPRSATDPAAVIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPAQVDPE 251
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A518IAJ6_9PLAN (Long-chain-fatty-acid--CoA ligase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IAJ6_9PLAN) HSP 1 Score: 343 bits (880), Expect = 9.090e-114 Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PGTRMALMVRPSLEFIALTFALFK+GAVIILIDPGMG KNIIR L+EVEPEGFVAIPLAQL RK+KRR FPKARLNVT+GKPVLTSGIDY WLLG W PFE++QR TDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDM+PTKPA V PE
Sbjct: 64 PGTRMALMVRPSLEFIALTFALFKSGAVIILIDPGMGGKNIIRCLSEVEPEGFVAIPLAQLIRKLKRRSFPKARLNVTMGKPVLTSGIDYQWLLGGNWEPFEMVQRTMTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMNPTKPAQVHPE 250
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A517VZF5_9PLAN (Long-chain-fatty-acid--CoA ligase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZF5_9PLAN) HSP 1 Score: 337 bits (864), Expect = 2.350e-111 Identity = 164/186 (88.17%), Postives = 172/186 (92.47%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDP 558
PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMG KNIIR L+EVEPEGFVAIPLAQ+ RK K+R FPKA LNVTVGKPVLTSGIDY WLLG +W P ++QR TDPAAIIFTSGSTGPPKGVAYEHGMFWSQVD LRDYYQIQPGEVDLPGFPLFALFNSAMGVTTV+PDM+PTKPALVDP
Sbjct: 64 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGGKNIIRCLSEVEPEGFVAIPLAQMIRKFKKRSFPKAHLNVTVGKPVLTSGIDYRWLLGGDWKPLPMVQRTLTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDFLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVIPDMNPTKPALVDP 249
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A3B1DVZ2_9ZZZZ (AMP-dependent synthetase/ligase in alkane synthesis cluster n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DVZ2_9ZZZZ) HSP 1 Score: 285 bits (728), Expect = 6.830e-91 Identity = 143/186 (76.88%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDP 558
PG RM LMVRPSLEFI+LTFALFKAGAVI+LIDPGMGR NI LAEV+P GFVAIP+ Q R +K R +P A+LNVTVGK G +Y LLGKEW PFEI TDPAAIIFTSGSTGPPKGV YEHGMF +QVDLLRD+Y I PGEVDLPGFPLFALFN+AMGVTTVVPDMDPTKPALVDP
Sbjct: 64 PGMRMVLMVRPSLEFISLTFALFKAGAVIVLIDPGMGRTNIFHCLAEVDPAGFVAIPIVQAIRIMKGRQYPHAKLNVTVGKRFGWKGPNYQELLGKEWRPFEIPDCQPTDPAAIIFTSGSTGPPKGVLYEHGMFNAQVDLLRDFYDIAPGEVDLPGFPLFALFNAAMGVTTVVPDMDPTKPALVDP 249
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A2E7D6R7_9PLAN (Peptide synthase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D6R7_9PLAN) HSP 1 Score: 258 bits (660), Expect = 1.210e-80 Identity = 128/187 (68.45%), Postives = 150/187 (80.21%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PGTR+ LMV P LEFIALTFA+FK GAV +LIDPGMGR NI R L EVEP GFVAIP+ L R + RR F A+LNVTVG+ G++Y L GKE++ FE +R+ D AAIIFTSGSTGPPKGVAYEHGMF +QVDLL+++Y I+PG VDL GFPLFALFNSAMGVTTV+PDM+PT+PA VDP+
Sbjct: 67 PGTRLVLMVPPGLEFIALTFAIFKTGAVCVLIDPGMGRSNIFRCLEEVEPHGFVAIPIVHLVRILNRRRFDSAKLNVTVGRRFFWGGLNYQQLRGKEYSKFESPRRESRDLAAIIFTSGSTGPPKGVAYEHGMFNAQVDLLQEFYGIEPGGVDLSGFPLFALFNSAMGVTTVIPDMNPTRPADVDPD 253
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A517ZRA5_9PLAN (Long-chain-fatty-acid--CoA ligase n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZRA5_9PLAN) HSP 1 Score: 256 bits (655), Expect = 2.460e-80 Identity = 128/187 (68.45%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PG RM L V PSLEFIALTFALFKAGAV +LIDPGMG KN+ R L +V+P+GF+A+ LAQ RK+ P AR NVTVGK SG +Y LLG WTP + TDPAAIIFTSGSTGP KGV YEHGMF +QVD +RD+Y IQPGE+DLPGFPLFALFNSAMGVTTV+PDMDP++PA VDP+
Sbjct: 28 PGHRMVLFVPPSLEFIALTFALFKAGAVGVLIDPGMGIKNVFRCLNQVDPDGFIAVSLAQAARKLFSSKVPNARFNVTVGKRWFWSGPNYSDLLGGPWTPLDAPDTKSTDPAAIIFTSGSTGPAKGVLYEHGMFAAQVDDIRDFYDIQPGEIDLPGFPLFALFNSAMGVTTVIPDMDPSRPAQVDPK 214
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A836RDD3_9PLAN (Peptide synthase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RDD3_9PLAN) HSP 1 Score: 250 bits (638), Expect = 2.110e-77 Identity = 122/188 (64.89%), Postives = 150/188 (79.79%), Query Frame = 1
Query: 1 PGTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTV-GKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDPE 561
PG R+ LMVRPSLEF+ LTFALFKAG VI+LIDPGMGR N+ R L EVEP+GF+AIPL Q R RR FP+A++NVTV G+ G+ Y+ LL + WTP+E + +DPAAIIFTSGSTGPPKGV Y HG+F +QV+LL++++ IQPGEV L FPLFALF++AMGVTTV+P+MDPT+PA VDPE
Sbjct: 64 PGMRLVLMVRPSLEFVTLTFALFKAGVVIVLIDPGMGRGNVFRCLEEVEPDGFIAIPLVQAVRFATRRRFPRAQVNVTVAGRRWFWGGVTYEQLLEESWTPYEPVPTAPSDPAAIIFTSGSTGPPKGVLYLHGIFDAQVELLQEFFGIQPGEVSLSAFPLFALFDAAMGVTTVIPEMDPTRPARVDPE 251
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Match: A0A142WQL0_9PLAN (Long-chain-fatty-acid--CoA ligase n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WQL0_9PLAN) HSP 1 Score: 248 bits (632), Expect = 1.650e-76 Identity = 123/185 (66.49%), Postives = 145/185 (78.38%), Query Frame = 1
Query: 4 GTRMALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVAIPLAQLFRKIKRRDFPKARLNVTVGKPVLTSGIDYDWLLGKEWTPFEIIQRDRTDPAAIIFTSGSTGPPKGVAYEHGMFWSQVDLLRDYYQIQPGEVDLPGFPLFALFNSAMGVTTVVPDMDPTKPALVDP 558
G+R+ LMVRPSLEFIALTF LFKAG V++L+DPGMG+ NI+ L EV+P+GFVAIP+ R R FP AR NV+VG V + Y LLG+EW+ I + TDPAAIIFTSGSTG PKGV +EHGMF +QVDL+RD+Y IQPGEVDLPGFP FALFN+AMGVTTV+PDMDPT+PA VDP
Sbjct: 65 GSRLVLMVRPSLEFIALTFGLFKAGMVMVLVDPGMGKTNILHCLEEVDPQGFVAIPVVHAIRMWNWRRFPNARWNVSVGPRVPGAMKSYCALLGREWSRTPIAETRSTDPAAIIFTSGSTGAPKGVQFEHGMFNAQVDLIRDFYNIQPGEVDLPGFPPFALFNAAMGVTTVIPDMDPTRPAQVDP 249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116242.3371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116242.3371.1 >prot_M-pyrifera_M_contig116242.3371.1 ID=prot_M-pyrifera_M_contig116242.3371.1|Name=mRNA_M-pyrifera_M_contig116242.3371.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp MALMVRPSLEFIALTFALFKAGAVIILIDPGMGRKNIIRSLAEVEPEGFVback to top mRNA from alignment at M-pyrifera_M_contig116242:1..561- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116242.3371.1 ID=mRNA_M-pyrifera_M_contig116242.3371.1|Name=mRNA_M-pyrifera_M_contig116242.3371.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig116242:1..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116242:1..561- >mRNA_M-pyrifera_M_contig116242.3371.1 ID=mRNA_M-pyrifera_M_contig116242.3371.1|Name=mRNA_M-pyrifera_M_contig116242.3371.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig116242:1..561- (Macrocystis pyrifera P11B4 male)back to top |