mRNA_M-pyrifera_M_contig116215.3367.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A6J6GIQ3_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6GIQ3_9ZZZZ) HSP 1 Score: 235 bits (600), Expect = 3.380e-72 Identity = 129/186 (69.35%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRSYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPLAGAPGSARAGEAALQVRSV 558
AR L IGMVFQDLRL+PALTVAENIALA Y RA V EA Q+ + VDP +VR LALA+RQ+VEILRVLM GARVVILDEPTSALAPQEVDALF TV +LR RGLAVVLITHKLREAR+ +DRLTVLRGG I++G+ P +DD+ LVEAMVG +V+PLAGAP + R GE AL++R V
Sbjct: 91 ARELEIGMVFQDLRLVPALTVAENIALATGTEGYRRRAAERRVAEAAEQFGIAVDPRALVRELALAQRQQVEILRVLMAGARVVILDEPTSALAPQEVDALFETVAQLRARGLAVVLITHKLREARSASDRLTVLRGGTLILDGVPPSEVDDERLVEAMVGRSVQPLAGAPNAVRPGEQALRMRDV 276
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: UPI001444B69D (ATP-binding cassette domain-containing protein n=1 Tax=Cellulomonas septica TaxID=285080 RepID=UPI001444B69D) HSP 1 Score: 197 bits (500), Expect = 2.380e-58 Identity = 112/169 (66.27%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALAL-DGRSYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPLA 504
ARALGIGMVFQDLRL+PALTVAENIALAL +G RA V EA A+Y L VDP VR+L++ ERQR EIL+VLM GAR+VILDEPTS LAPQEV+ALF V +LR +GLAVVL+THKL E RA AD++TVLRGG+ +V P D ELVEAMVG V PLA
Sbjct: 153 ARALGIGMVFQDLRLVPALTVAENIALALPEGPLLGLRALSARVAEASARYGLSVDPAATVRHLSIGERQRTEILKVLMTGARLVILDEPTSVLAPQEVEALFGVVAQLRDQGLAVVLVTHKLNEVRAIADQVTVLRGGRVVVGAADPAGFTDAELVEAMVGRRVPPLA 321
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: UPI00201035A6 (ABC transporter ATP-binding protein n=1 Tax=Sphaerisporangium sp. NEAU-ZS1 TaxID=2935860 RepID=UPI00201035A6) HSP 1 Score: 195 bits (495), Expect = 1.230e-56 Identity = 107/167 (64.07%), Postives = 125/167 (74.85%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRSYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPL 501
AR+LGIGMVFQDLRL+PALTVAENIALAL GR DR ++ + EA A++ L VDP + +L++ ERQR EIL+VLM G+RVVILDEPTS LAPQEV ALF V LR G VV++THKL E RA ADR+TVLRGGK ++ G P DD ELVEAMVG V PL
Sbjct: 88 ARSLGIGMVFQDLRLVPALTVAENIALALPGRPKLDRLSKR-ITEAAAEHGLAVDPRARISHLSIGERQRAEILKVLMTGSRVVILDEPTSVLAPQEVAALFEVVGRLRDTGYGVVIVTHKLNEVRAIADRVTVLRGGKVVLNGADPAAYDDAELVEAMVGRAVPPL 253
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: UPI0019435C23 (ABC transporter ATP-binding protein n=1 Tax=Cellulomonas phragmiteti TaxID=478780 RepID=UPI0019435C23) HSP 1 Score: 194 bits (494), Expect = 1.910e-56 Identity = 111/168 (66.07%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALD-GRSYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPL 501
ARALGIGMVFQDLRL+PALTVAENIALAL G RA V EA +Y L VDP VR+L++ ERQR EIL+VLM GAR+VILDEPTS LAP+EVDALF V +LR +GLAVVL+THKL E RA AD++TVLRGG+ IV P D+ELVEAMVG V PL
Sbjct: 91 ARALGIGMVFQDLRLVPALTVAENIALALPRGPLLGLRALSARVTEASERYGLSVDPAATVRHLSIGERQRTEILKVLMTGARLVILDEPTSVLAPREVDALFEVVAQLRDQGLAVVLVTHKLNEVRAIADQVTVLRGGRVIVGAADPGGFTDEELVEAMVGRRVPPL 258
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A365HAT3_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Actinomadura craniellae TaxID=2231787 RepID=A0A365HAT3_9ACTN) HSP 1 Score: 192 bits (489), Expect = 7.860e-56 Identity = 110/168 (65.48%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGR-SYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPL 501
ARA GIGMVFQDLRL+PALTVAENIALAL GR S DR R + EA +Y L VDP V +L++ ERQR EIL+VLM GAR+VILDEPTS LAPQEV+AL A + ELR RGL VVL+THKLRE RA ADR+TVLRGG+ ++ G P DD LV AMVG +V L
Sbjct: 78 ARAAGIGMVFQDLRLVPALTVAENIALALPGRGSRGDRLHRR-ITEAAGRYGLAVDPAARVGHLSIGERQRAEILKVLMAGARIVILDEPTSVLAPQEVEALLAAIGELRTRGLGVVLVTHKLREVRAVADRVTVLRGGRVVLAGADPAGHDDAALVRAMVGRSVPAL 244
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A1Q7BUX4_9ACTN (ABC transporter n=1 Tax=Actinobacteria bacterium 13_2_20CM_2_71_6 TaxID=1803494 RepID=A0A1Q7BUX4_9ACTN) HSP 1 Score: 192 bits (488), Expect = 8.820e-56 Identity = 105/170 (61.76%), Postives = 129/170 (75.88%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRSYA--DRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPLA 504
ARA GIGMVFQD+RL+PAL+V EN+ALAL R + +A + A +Y L V PD +VR+L++ ERQRVEIL+VLM GAR++ILDEPTS LAPQEVDALFA + LR GL++V+ITHKL EARA ADR+TVLRGGK ++ G P L D +LVEAMVG +V PLA
Sbjct: 67 ARAAGIGMVFQDMRLVPALSVTENVALALPLRGFRLNRKALARQIDAAAKKYGLPVHPDALVRHLSIGERQRVEILKVLMAGARLLILDEPTSVLAPQEVDALFAAMGALRAAGLSLVIITHKLNEARAIADRVTVLRGGKVVLSGADPAELSDGQLVEAMVGRSVPPLA 236
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A3N1AYM8_9ACTN (Nucleoside ABC transporter ATP-binding protein n=1 Tax=Micromonospora sp. Llam0 TaxID=2485143 RepID=A0A3N1AYM8_9ACTN) HSP 1 Score: 192 bits (489), Expect = 1.290e-55 Identity = 108/170 (63.53%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRS--YADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPLA 504
ARA GIGMVFQDLRLIPA TV ENIALAL GR + RA + E +Y L V PD +V NL++ ERQRVEIL+VLM GAR++ILDEPTS LAPQEVDALFA V LR GL++V+ITHKL EARA ADR+TVLRGG+ ++ P D ELVEAMVG +V LA
Sbjct: 86 ARAAGIGMVFQDLRLIPAFTVTENIALALPGRGLRFQRRALSARIAEQARRYGLPVHPDALVANLSIGERQRVEILKVLMAGARLLILDEPTSVLAPQEVDALFAAVRALRANGLSIVIITHKLAEARAIADRVTVLRGGRVVLRNADPTAHTDAELVEAMVGRSVPGLA 255
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A538D5L6_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D5L6_9ACTN) HSP 1 Score: 191 bits (486), Expect = 2.410e-55 Identity = 112/189 (59.26%), Postives = 135/189 (71.43%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRSYADR--ATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTV---RPLAGAPGSARAGEAALQVR 552
AR G+GMVFQDLRL+PALTVAEN+ALAL R A R A+ EA QY L VDP VR L++ ERQRVEIL+VLM GARVVILDEPTS LAPQEVDALF + EL+++GL+ V+ITHKLREARA +DR+TV+R G+ IV G DD+ LVEAMVG +V R + A S A + L++R
Sbjct: 79 ARRFGVGMVFQDLRLVPALTVAENVALALPSSCKHRRGAALRRAIVEASQQYGLAVDPSAKVRTLSIGERQRVEILKVLMAGARVVILDEPTSVLAPQEVDALFTEIGELKQQGLSFVIITHKLREARAVSDRVTVMRQGRVIVNGEPTSAFDDEGLVEAMVGRSVPSLRDVRRAIKSGTANDTVLELR 267
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A1S1QGN7_9ACTN (ABC transporter n=3 Tax=Frankia TaxID=1854 RepID=A0A1S1QGN7_9ACTN) HSP 1 Score: 191 bits (486), Expect = 4.900e-55 Identity = 104/169 (61.54%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALAL--DGRSYADRATRTAVREAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPL 501
ARALGIGMVFQDLRL+PA TV EN ALAL G + R + EA Y L VDP +VR+L++ ERQR EIL+VLM GAR+VILDEPTS LAP EVDALFA V+ L+ +G VV++THKL E RA ADR+TVLRGG+ ++ G+ P + D ELVEAMVG TV PL
Sbjct: 90 ARALGIGMVFQDLRLVPAFTVTENYALALARTGLTLRHGELRRRIAEASESYGLAVDPTALVRHLSIGERQRTEILKVLMTGARIVILDEPTSVLAPSEVDALFAMVNGLKAQGFGVVIVTHKLAEVRAIADRVTVLRGGRVVLGGVDPKPMTDAELVEAMVGQTVAPL 258
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Match: A0A656Y507_9CELL (ABC transporter n=1 Tax=Cellulomonas sp. Root137 TaxID=1736459 RepID=A0A656Y507_9CELL) HSP 1 Score: 189 bits (481), Expect = 6.570e-55 Identity = 111/170 (65.29%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 ARALGIGMVFQDLRLIPALTVAENIALALDGRSYADRATRTAVR--EAGAQYALEVDPDEIVRNLALAERQRVEILRVLMVGARVVILDEPTSALAPQEVDALFATVDELRRRGLAVVLITHKLREARANADRLTVLRGGKTIVEGIHPDTLDDDELVEAMVGHTVRPLA 504
ARALGIGMVFQDLRL+PALTVAENIALAL R T+ A R EA Y L VDP VR+L++ ERQR EIL+VLM GAR+VILDEPTS LAPQEV+ALF V +LR RGL VVL+THKL E RA AD++TVLRGG+ I+ P D ELVEAMVG V PLA
Sbjct: 91 ARALGIGMVFQDLRLVPALTVAENIALALP-EGLRLRLTQLAARITEASEAYGLAVDPSAQVRHLSIGERQRAEILKVLMTGARLVILDEPTSVLAPQEVEALFGVVAQLRDRGLGVVLVTHKLGEVRAIADQVTVLRGGQVILNAEDPGNFSDAELVEAMVGRRVPPLA 259 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116215.3367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116215.3367.1 >prot_M-pyrifera_M_contig116215.3367.1 ID=prot_M-pyrifera_M_contig116215.3367.1|Name=mRNA_M-pyrifera_M_contig116215.3367.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MVFQDLRLIPALTVAENIALALDGRSYADRATRTAVREAGAQYALEVDPDback to top mRNA from alignment at M-pyrifera_M_contig116215:4..561- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116215.3367.1 ID=mRNA_M-pyrifera_M_contig116215.3367.1|Name=mRNA_M-pyrifera_M_contig116215.3367.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig116215:4..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116215:4..561- >mRNA_M-pyrifera_M_contig116215.3367.1 ID=mRNA_M-pyrifera_M_contig116215.3367.1|Name=mRNA_M-pyrifera_M_contig116215.3367.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig116215:4..561- (Macrocystis pyrifera P11B4 male)back to top |